RNA–Protein interactions for RNA: ENST00000438508.1

HMGN1P6-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 6, humanhuman

BASIC

Gene HMGN1P6, Length 291 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P6-201ENST00000438508 METRNQ9UJH8 293 aa15.4■□□□□ 0.06
HMGN1P6-201ENST00000438508 LCE2DQ5TA82 110 aaPredicted RBP15.39■□□□□ 0.05
HMGN1P6-201ENST00000438508 ATMINO43313 823 aaPredicted RBP15.35■□□□□ 0.05
HMGN1P6-201ENST00000438508 NPM1P06748 294 aaKnown RBP eCLIP15.35■□□□□ 0.05
HMGN1P6-201ENST00000438508 MNX1P50219 401 aaPredicted RBP15.32■□□□□ 0.04
HMGN1P6-201ENST00000438508 MS4A3Q96HJ5 214 aa15.27■□□□□ 0.04
HMGN1P6-201ENST00000438508 SCUBE2Q9NQ36 999 aa15.24■□□□□ 0.03
HMGN1P6-201ENST00000438508 FAM163AQ96GL9 167 aaPredicted RBP15.23■□□□□ 0.03
HMGN1P6-201ENST00000438508 ATN1P54259 1190 aaPredicted RBP15.12■□□□□ 0.01
HMGN1P6-201ENST00000438508 POTEFA5A3E0 1075 aa15.08■□□□□ 0
HMGN1P6-201ENST00000438508 SPDYE4A6NLX3 237 aa15.08■□□□□ 0
HMGN1P6-201ENST00000438508 CDAN1Q8IWY9 1227 aa15.03■□□□□ -0
HMGN1P6-201ENST00000438508 CCDC61Q9Y6R9 512 aa15.03■□□□□ -0
HMGN1P6-201ENST00000438508 KIF12Q96FN5 646 aa14.99□□□□□ -0.01
HMGN1P6-201ENST00000438508 BMP2KQ9NSY1 1161 aaPredicted RBP14.98□□□□□ -0.01
HMGN1P6-201ENST00000438508 TIE1P35590 1138 aa14.95□□□□□ -0.02
HMGN1P6-201ENST00000438508 TSPYL2Q9H2G4 693 aaPredicted RBP14.93□□□□□ -0.02
HMGN1P6-201ENST00000438508 TRPC6Q9Y210 931 aa14.86□□□□□ -0.03
HMGN1P6-201ENST00000438508 COLQQ9Y215 455 aaPredicted RBP14.86□□□□□ -0.03
HMGN1P6-201ENST00000438508 SEC24BO95487 1268 aa14.81□□□□□ -0.04
HMGN1P6-201ENST00000438508 IER5LQ5T953 404 aa14.81□□□□□ -0.04
HMGN1P6-201ENST00000438508 MAP3K13O43283 966 aa14.8□□□□□ -0.04
HMGN1P6-201ENST00000438508 TTLL13PA6NNM8 815 aa14.79□□□□□ -0.04
HMGN1P6-201ENST00000438508 CSRNP3Q8WYN3 585 aa14.79□□□□□ -0.04
HMGN1P6-201ENST00000438508 ST18O60284 1047 aa14.78□□□□□ -0.04
HMGN1P6-201ENST00000438508 MMRN1Q13201 1228 aa14.74□□□□□ -0.05
HMGN1P6-201ENST00000438508 PROM2Q8N271 834 aa14.73□□□□□ -0.05
HMGN1P6-201ENST00000438508 SGIP1Q9BQI5 828 aa14.72□□□□□ -0.05
HMGN1P6-201ENST00000438508 SPNS2Q8IVW8 549 aa14.69□□□□□ -0.06
HMGN1P6-201ENST00000438508 SLAIN1Q8ND83 568 aa14.69□□□□□ -0.06
HMGN1P6-201ENST00000438508 TRIM35Q9UPQ4 493 aa14.67□□□□□ -0.06
HMGN1P6-201ENST00000438508 TMEM121BQ9BXQ6 578 aaPredicted RBP14.66□□□□□ -0.06
HMGN1P6-201ENST00000438508 RASEFQ8IZ41 740 aa14.63□□□□□ -0.07
HMGN1P6-201ENST00000438508 PLEKHG5O94827 1062 aa14.55□□□□□ -0.08
HMGN1P6-201ENST00000438508 PCDHB13Q9Y5F0 798 aa14.53□□□□□ -0.08
HMGN1P6-201ENST00000438508 SNPHO15079 494 aa14.52□□□□□ -0.09
HMGN1P6-201ENST00000438508 PLCG2P16885 1265 aa14.5□□□□□ -0.09
HMGN1P6-201ENST00000438508 IRX5P78411 483 aaPredicted RBP14.49□□□□□ -0.09
HMGN1P6-201ENST00000438508 MIER1Q8N108 512 aa14.47□□□□□ -0.09
HMGN1P6-201ENST00000438508 IFNL1Q8IU54 200 aa14.44□□□□□ -0.1
HMGN1P6-201ENST00000438508 TMEM106CQ9BVX2 250 aa14.43□□□□□ -0.1
HMGN1P6-201ENST00000438508 OCEL1Q9H607 264 aa14.39□□□□□ -0.11
HMGN1P6-201ENST00000438508 MARVELD3Q96A59 401 aa14.37□□□□□ -0.11
HMGN1P6-201ENST00000438508 NUBP1P53384 320 aa14.35□□□□□ -0.11
HMGN1P6-201ENST00000438508 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.35□□□□□ -0.11
HMGN1P6-201ENST00000438508 ZBTB47Q9UFB7 747 aaPredicted RBP14.3□□□□□ -0.12
HMGN1P6-201ENST00000438508 KRTAP3-3Q9BYR6 98 aa14.27□□□□□ -0.13
HMGN1P6-201ENST00000438508 KRTAP3-2Q9BYR7 98 aa14.27□□□□□ -0.13
HMGN1P6-201ENST00000438508 EMP3P54852 163 aa14.23□□□□□ -0.13
HMGN1P6-201ENST00000438508 PLCD3Q8N3E9 789 aa14.23□□□□□ -0.13
HMGN1P6-201ENST00000438508 FAM212AQ96EL1 285 aa14.22□□□□□ -0.13
HMGN1P6-201ENST00000438508 POTEB3A0JP26 581 aa14.19□□□□□ -0.14
HMGN1P6-201ENST00000438508 POTEBQ6S5H4 581 aa14.19□□□□□ -0.14
HMGN1P6-201ENST00000438508 HS3ST6Q96QI5 342 aa14.19□□□□□ -0.14
HMGN1P6-201ENST00000438508 PDCD7Q8N8D1 485 aaKnown RBP14.14□□□□□ -0.15
HMGN1P6-201ENST00000438508 L3MBTL3Q96JM7 780 aaPredicted RBP14.11□□□□□ -0.15
HMGN1P6-201ENST00000438508 FAM205CA6NFA0 338 aa14.1□□□□□ -0.15
HMGN1P6-201ENST00000438508 C3orf67Q6ZVT6 689 aa14.09□□□□□ -0.15
HMGN1P6-201ENST00000438508 PCDHB8Q9UN66 801 aa14□□□□□ -0.17
HMGN1P6-201ENST00000438508 PYGBP11216 843 aa13.98□□□□□ -0.17
HMGN1P6-201ENST00000438508 EHMT2Q96KQ7 1210 aa13.98□□□□□ -0.17
HMGN1P6-201ENST00000438508 ILDR1Q86SU0 546 aaPredicted RBP13.95□□□□□ -0.18
HMGN1P6-201ENST00000438508 DCAF8Q5TAQ9 597 aa13.94□□□□□ -0.18
HMGN1P6-201ENST00000438508 MKRN3Q13064 507 aaKnown RBP13.93□□□□□ -0.18
HMGN1P6-201ENST00000438508 HOXB3P14651 431 aaPredicted RBP13.91□□□□□ -0.18
HMGN1P6-201ENST00000438508 RNF166Q96A37 237 aaPredicted RBP13.91□□□□□ -0.18
HMGN1P6-201ENST00000438508 HOXB1P14653 301 aaPredicted RBP13.9□□□□□ -0.18
HMGN1P6-201ENST00000438508 GOLGA2Q08379 1002 aa13.88□□□□□ -0.19
HMGN1P6-201ENST00000438508 ZNF467Q7Z7K2 595 aaPredicted RBP13.88□□□□□ -0.19
HMGN1P6-201ENST00000438508 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.88□□□□□ -0.19
HMGN1P6-201ENST00000438508 CCDC180Q9P1Z9 1646 aa13.8□□□□□ -0.2
HMGN1P6-201ENST00000438508 MYT1LQ9UL68 1186 aa13.8□□□□□ -0.2
HMGN1P6-201ENST00000438508 CHRM1P11229 460 aaPredicted RBP13.79□□□□□ -0.2
HMGN1P6-201ENST00000438508 ERBB3P21860 1342 aa13.79□□□□□ -0.2
HMGN1P6-201ENST00000438508 DOK7Q18PE1 504 aa13.76□□□□□ -0.21
HMGN1P6-201ENST00000438508 ZNF710Q8N1W2 664 aa13.76□□□□□ -0.21
HMGN1P6-201ENST00000438508 PTGER2P43116 358 aa13.73□□□□□ -0.21
HMGN1P6-201ENST00000438508 PSEN1P49768 467 aa13.73□□□□□ -0.21
HMGN1P6-201ENST00000438508 BOLA1Q9Y3E2 137 aa13.73□□□□□ -0.21
HMGN1P6-201ENST00000438508 GSE1Q14687 1217 aa13.72□□□□□ -0.21
HMGN1P6-201ENST00000438508 DPY19L2Q6NUT2 758 aa13.72□□□□□ -0.21
HMGN1P6-201ENST00000438508 ZNF687Q8N1G0 1237 aa13.68□□□□□ -0.22
HMGN1P6-201ENST00000438508 VARS2Q5ST30 1063 aaKnown RBP13.67□□□□□ -0.22
HMGN1P6-201ENST00000438508 G3V3G9 751 aa13.66□□□□□ -0.22
HMGN1P6-201ENST00000438508 RIMBP2O15034 1052 aa13.66□□□□□ -0.22
HMGN1P6-201ENST00000438508 ZSWIM6Q9HCJ5 1215 aa13.65□□□□□ -0.22
HMGN1P6-201ENST00000438508 PDAP1Q13442 181 aaKnown RBP13.62□□□□□ -0.23
HMGN1P6-201ENST00000438508 GPR153Q6NV75 609 aa13.53□□□□□ -0.24
HMGN1P6-201ENST00000438508 CABP2Q9NPB3 220 aa13.53□□□□□ -0.24
HMGN1P6-201ENST00000438508 FBXO3Q9UK99 471 aa13.52□□□□□ -0.25
HMGN1P6-201ENST00000438508 ANKRD13DQ6ZTN6 518 aa13.42□□□□□ -0.26
HMGN1P6-201ENST00000438508 TMEM92Q6UXU6 159 aa13.41□□□□□ -0.26
HMGN1P6-201ENST00000438508 KLHL34Q8N239 644 aa13.41□□□□□ -0.26
HMGN1P6-201ENST00000438508 FKBP8Q14318 412 aa13.4□□□□□ -0.26
HMGN1P6-201ENST00000438508 LSM11P83369 360 aaKnown RBP eCLIP13.38□□□□□ -0.27
HMGN1P6-201ENST00000438508 PLA2G2EQ9NZK7 142 aa13.38□□□□□ -0.27
HMGN1P6-201ENST00000438508 MICALL2Q8IY33 904 aa13.36□□□□□ -0.27
HMGN1P6-201ENST00000438508 ZNF316A6NFI3 1004 aaPredicted RBP13.33□□□□□ -0.28
HMGN1P6-201ENST00000438508 VASPP50552 380 aaPredicted RBP13.33□□□□□ -0.28
HMGN1P6-201ENST00000438508 ZCCHC6Q5VYS8 1495 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms