RNA–Protein interactions for RNA: ENST00000435451.1

ABCA13-203, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 3

Gene ABCA13, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-203ENST00000435451 PHF12Q96QT6 1004 aa13.34□□□□□ -0.27
ABCA13-203ENST00000435451 KLHL34Q8N239 644 aa13.33□□□□□ -0.28
ABCA13-203ENST00000435451 GALR2O43603 387 aaPredicted RBP13.27□□□□□ -0.29
ABCA13-203ENST00000435451 FAM212AQ96EL1 285 aa13.26□□□□□ -0.29
ABCA13-203ENST00000435451 KIF12Q96FN5 646 aa13.24□□□□□ -0.29
ABCA13-203ENST00000435451 POTEIP0CG38 1075 aa13.21□□□□□ -0.29
ABCA13-203ENST00000435451 DCAF8Q5TAQ9 597 aa13.21□□□□□ -0.29
ABCA13-203ENST00000435451 SPOCK2Q92563 424 aa13.2□□□□□ -0.3
ABCA13-203ENST00000435451 MS4A3Q96HJ5 214 aa13.19□□□□□ -0.3
ABCA13-203ENST00000435451 MAP3K13O43283 966 aa13.17□□□□□ -0.3
ABCA13-203ENST00000435451 DCBLD2Q96PD2 775 aa13.16□□□□□ -0.3
ABCA13-203ENST00000435451 GSE1Q14687 1217 aa13.15□□□□□ -0.3
ABCA13-203ENST00000435451 SGIP1Q9BQI5 828 aa13.14□□□□□ -0.31
ABCA13-203ENST00000435451 PYGBP11216 843 aa13.08□□□□□ -0.32
ABCA13-203ENST00000435451 PCDHB13Q9Y5F0 798 aa13.08□□□□□ -0.32
ABCA13-203ENST00000435451 CHRM1P11229 460 aaPredicted RBP13.05□□□□□ -0.32
ABCA13-203ENST00000435451 ASTLQ6HA08 431 aaPredicted RBP13.04□□□□□ -0.32
ABCA13-203ENST00000435451 IFNL1Q8IU54 200 aa13.04□□□□□ -0.32
ABCA13-203ENST00000435451 TRPC6Q9Y210 931 aa13.04□□□□□ -0.32
ABCA13-203ENST00000435451 CIZ1Q9ULV3 898 aaPredicted RBP13.03□□□□□ -0.32
ABCA13-203ENST00000435451 ATMINO43313 823 aaPredicted RBP13.02□□□□□ -0.33
ABCA13-203ENST00000435451 TIE1P35590 1138 aa13.01□□□□□ -0.33
ABCA13-203ENST00000435451 PELP1Q8IZL8 1130 aaKnown RBP12.99□□□□□ -0.33
ABCA13-203ENST00000435451 BMP2KQ9NSY1 1161 aaPredicted RBP12.99□□□□□ -0.33
ABCA13-203ENST00000435451 ATN1P54259 1190 aaPredicted RBP12.96□□□□□ -0.33
ABCA13-203ENST00000435451 PCDHB8Q9UN66 801 aa12.94□□□□□ -0.34
ABCA13-203ENST00000435451 TTLL13PA6NNM8 815 aa12.93□□□□□ -0.34
ABCA13-203ENST00000435451 ZNF467Q7Z7K2 595 aaPredicted RBP12.92□□□□□ -0.34
ABCA13-203ENST00000435451 TRIM41Q8WV44 630 aa12.92□□□□□ -0.34
ABCA13-203ENST00000435451 SLC39A7Q92504 469 aa12.88□□□□□ -0.35
ABCA13-203ENST00000435451 C7P10643 843 aa12.87□□□□□ -0.35
ABCA13-203ENST00000435451 LHX8Q68G74 356 aa12.87□□□□□ -0.35
ABCA13-203ENST00000435451 TMEM106CQ9BVX2 250 aa12.86□□□□□ -0.35
ABCA13-203ENST00000435451 METRNQ9UJH8 293 aa12.84□□□□□ -0.35
ABCA13-203ENST00000435451 TRIM35Q9UPQ4 493 aa12.84□□□□□ -0.35
ABCA13-203ENST00000435451 POTEB2H3BUK9 544 aa12.78□□□□□ -0.36
ABCA13-203ENST00000435451 PSEN1P49768 467 aa12.78□□□□□ -0.36
ABCA13-203ENST00000435451 IER5LQ5T953 404 aa12.78□□□□□ -0.36
ABCA13-203ENST00000435451 POTEFA5A3E0 1075 aa12.77□□□□□ -0.37
ABCA13-203ENST00000435451 PDAP1Q13442 181 aaKnown RBP12.77□□□□□ -0.37
ABCA13-203ENST00000435451 PKD2Q13563 968 aa12.76□□□□□ -0.37
ABCA13-203ENST00000435451 RNF25Q96BH1 459 aaPredicted RBP12.75□□□□□ -0.37
ABCA13-203ENST00000435451 RIOK3O14730 519 aaKnown RBP12.71□□□□□ -0.37
ABCA13-203ENST00000435451 COLQQ9Y215 455 aaPredicted RBP12.71□□□□□ -0.37
ABCA13-203ENST00000435451 ECM2O94769 699 aaPredicted RBP12.7□□□□□ -0.38
ABCA13-203ENST00000435451 SEC24BO95487 1268 aa12.68□□□□□ -0.38
ABCA13-203ENST00000435451 IRX5P78411 483 aaPredicted RBP12.68□□□□□ -0.38
ABCA13-203ENST00000435451 POTEJP0CG39 1038 aa12.67□□□□□ -0.38
ABCA13-203ENST00000435451 VGFO15240 615 aaPredicted RBP12.65□□□□□ -0.38
ABCA13-203ENST00000435451 GOLGA2Q08379 1002 aa12.63□□□□□ -0.39
ABCA13-203ENST00000435451 OTUD5Q96G74 571 aa12.63□□□□□ -0.39
ABCA13-203ENST00000435451 MKRN3Q13064 507 aaKnown RBP12.62□□□□□ -0.39
ABCA13-203ENST00000435451 OCEL1Q9H607 264 aa12.62□□□□□ -0.39
ABCA13-203ENST00000435451 PLCG2P16885 1265 aa12.61□□□□□ -0.39
ABCA13-203ENST00000435451 CABP2Q9NPB3 220 aa12.61□□□□□ -0.39
ABCA13-203ENST00000435451 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.6□□□□□ -0.39
ABCA13-203ENST00000435451 RGL2O15211 777 aa12.6□□□□□ -0.39
ABCA13-203ENST00000435451 ZFP91Q96JP5 570 aaPredicted RBP12.6□□□□□ -0.39
ABCA13-203ENST00000435451 TAOK2Q9UL54 1235 aa12.59□□□□□ -0.39
ABCA13-203ENST00000435451 MAMSTRQ6ZN01 415 aa12.57□□□□□ -0.4
ABCA13-203ENST00000435451 ILDR1Q86SU0 546 aaPredicted RBP12.57□□□□□ -0.4
ABCA13-203ENST00000435451 PDCD7Q8N8D1 485 aaKnown RBP12.55□□□□□ -0.4
ABCA13-203ENST00000435451 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.54□□□□□ -0.4
ABCA13-203ENST00000435451 EFCAB3Q8N7B9 438 aa12.53□□□□□ -0.4
ABCA13-203ENST00000435451 SCUBE2Q9NQ36 999 aa12.51□□□□□ -0.41
ABCA13-203ENST00000435451 BCL11BQ9C0K0 894 aaPredicted RBP12.49□□□□□ -0.41
ABCA13-203ENST00000435451 SOX12O15370 315 aa12.47□□□□□ -0.41
ABCA13-203ENST00000435451 STK25O00506 426 aa12.46□□□□□ -0.41
ABCA13-203ENST00000435451 STK24Q9Y6E0 443 aa12.46□□□□□ -0.41
ABCA13-203ENST00000435451 DPY19L2Q6NUT2 758 aa12.44□□□□□ -0.42
ABCA13-203ENST00000435451 L3MBTL3Q96JM7 780 aaPredicted RBP12.44□□□□□ -0.42
ABCA13-203ENST00000435451 PHF8Q9UPP1 1060 aa12.38□□□□□ -0.43
ABCA13-203ENST00000435451 MS4A4AQ96JQ5 239 aa12.37□□□□□ -0.43
ABCA13-203ENST00000435451 FBXO22Q8NEZ5 403 aa12.35□□□□□ -0.43
ABCA13-203ENST00000435451 NLRP6P59044 892 aa12.34□□□□□ -0.43
ABCA13-203ENST00000435451 HS6ST3Q8IZP7 471 aa12.34□□□□□ -0.43
ABCA13-203ENST00000435451 SLAIN1Q8ND83 568 aa12.34□□□□□ -0.43
ABCA13-203ENST00000435451 MFRPQ9BY79 579 aa12.34□□□□□ -0.43
ABCA13-203ENST00000435451 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.34□□□□□ -0.43
ABCA13-203ENST00000435451 BOLA1Q9Y3E2 137 aa12.34□□□□□ -0.43
ABCA13-203ENST00000435451 TMEM121BQ9BXQ6 578 aaPredicted RBP12.32□□□□□ -0.44
ABCA13-203ENST00000435451 CHGAP10645 457 aaKnown RBP12.3□□□□□ -0.44
ABCA13-203ENST00000435451 C3orf67Q6ZVT6 689 aa12.3□□□□□ -0.44
ABCA13-203ENST00000435451 G3V3G9 751 aa12.28□□□□□ -0.44
ABCA13-203ENST00000435451 DNAJC5Q9H3Z4 198 aa12.28□□□□□ -0.44
ABCA13-203ENST00000435451 AMER1Q5JTC6 1135 aaPredicted RBP12.27□□□□□ -0.45
ABCA13-203ENST00000435451 MICALL2Q8IY33 904 aa12.25□□□□□ -0.45
ABCA13-203ENST00000435451 NISCHQ9Y2I1 1504 aa12.22□□□□□ -0.45
ABCA13-203ENST00000435451 RTN4Q9NQC3 1192 aaKnown RBP12.22□□□□□ -0.45
ABCA13-203ENST00000435451 LCE2DQ5TA82 110 aaPredicted RBP12.19□□□□□ -0.46
ABCA13-203ENST00000435451 FAM163AQ96GL9 167 aaPredicted RBP12.19□□□□□ -0.46
ABCA13-203ENST00000435451 NKX1-1Q15270 411 aaPredicted RBP12.18□□□□□ -0.46
ABCA13-203ENST00000435451 SNPHO15079 494 aa12.15□□□□□ -0.46
ABCA13-203ENST00000435451 PPP1R37O75864 691 aa12.15□□□□□ -0.46
ABCA13-203ENST00000435451 DCAF8L2P0C7V8 631 aa12.15□□□□□ -0.46
ABCA13-203ENST00000435451 TMEM92Q6UXU6 159 aa12.15□□□□□ -0.46
ABCA13-203ENST00000435451 ST18O60284 1047 aa12.1□□□□□ -0.47
ABCA13-203ENST00000435451 RYDENQ9NUL5 291 aaKnown RBP12.09□□□□□ -0.47
ABCA13-203ENST00000435451 POTEMA6NI47 508 aa12.08□□□□□ -0.48
ABCA13-203ENST00000435451 POTEGQ6S5H5 508 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms