RNA–Protein interactions for RNA: ENST00000435252.1

GTF3C3-204, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-204ENST00000435252 ECM2O94769 699 aaPredicted RBP12.66□□□□□ -0.38
GTF3C3-204ENST00000435252 PKD2Q13563 968 aa12.65□□□□□ -0.38
GTF3C3-204ENST00000435252 CD44P16070 742 aaKnown RBP12.64□□□□□ -0.39
GTF3C3-204ENST00000435252 CLCN6P51797 869 aa12.64□□□□□ -0.39
GTF3C3-204ENST00000435252 TSPYL2Q9H2G4 693 aaPredicted RBP12.63□□□□□ -0.39
GTF3C3-204ENST00000435252 SP7Q8TDD2 431 aaPredicted RBP12.61□□□□□ -0.39
GTF3C3-204ENST00000435252 EVX2Q03828 476 aa12.55□□□□□ -0.4
GTF3C3-204ENST00000435252 DCAF8L2P0C7V8 631 aa12.54□□□□□ -0.4
GTF3C3-204ENST00000435252 ZNF579Q8NAF0 562 aaKnown RBP12.54□□□□□ -0.4
GTF3C3-204ENST00000435252 ZRANB1Q9UGI0 708 aa12.54□□□□□ -0.4
GTF3C3-204ENST00000435252 TAOK2Q9UL54 1235 aa12.54□□□□□ -0.4
GTF3C3-204ENST00000435252 CHRM1P11229 460 aaPredicted RBP12.53□□□□□ -0.4
GTF3C3-204ENST00000435252 PYGBP11216 843 aa12.51□□□□□ -0.41
GTF3C3-204ENST00000435252 CCDC61Q9Y6R9 512 aa12.51□□□□□ -0.41
GTF3C3-204ENST00000435252 ZNF467Q7Z7K2 595 aaPredicted RBP12.45□□□□□ -0.42
GTF3C3-204ENST00000435252 RIOK3O14730 519 aaKnown RBP12.44□□□□□ -0.42
GTF3C3-204ENST00000435252 RGL2O15211 777 aa12.44□□□□□ -0.42
GTF3C3-204ENST00000435252 SGIP1Q9BQI5 828 aa12.43□□□□□ -0.42
GTF3C3-204ENST00000435252 GABBR2O75899 941 aa12.4□□□□□ -0.42
GTF3C3-204ENST00000435252 PCDHB13Q9Y5F0 798 aa12.39□□□□□ -0.43
GTF3C3-204ENST00000435252 VGFO15240 615 aaPredicted RBP12.38□□□□□ -0.43
GTF3C3-204ENST00000435252 KIF12Q96FN5 646 aa12.37□□□□□ -0.43
GTF3C3-204ENST00000435252 RNF25Q96BH1 459 aaPredicted RBP12.36□□□□□ -0.43
GTF3C3-204ENST00000435252 PHF12Q96QT6 1004 aa12.36□□□□□ -0.43
GTF3C3-204ENST00000435252 MAP3K13O43283 966 aa12.35□□□□□ -0.43
GTF3C3-204ENST00000435252 PDAP1Q13442 181 aaKnown RBP12.3□□□□□ -0.44
GTF3C3-204ENST00000435252 CHGAP10645 457 aaKnown RBP12.29□□□□□ -0.44
GTF3C3-204ENST00000435252 IFNL1Q8IU54 200 aa12.28□□□□□ -0.44
GTF3C3-204ENST00000435252 PCDHB8Q9UN66 801 aa12.28□□□□□ -0.44
GTF3C3-204ENST00000435252 STK25O00506 426 aa12.27□□□□□ -0.45
GTF3C3-204ENST00000435252 HS6ST3Q8IZP7 471 aa12.26□□□□□ -0.45
GTF3C3-204ENST00000435252 MS4A3Q96HJ5 214 aa12.25□□□□□ -0.45
GTF3C3-204ENST00000435252 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.24□□□□□ -0.45
GTF3C3-204ENST00000435252 ZFP91Q96JP5 570 aaPredicted RBP12.24□□□□□ -0.45
GTF3C3-204ENST00000435252 GALR2O43603 387 aaPredicted RBP12.23□□□□□ -0.45
GTF3C3-204ENST00000435252 PSEN1P49768 467 aa12.23□□□□□ -0.45
GTF3C3-204ENST00000435252 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.23□□□□□ -0.45
GTF3C3-204ENST00000435252 BBXQ8WY36 941 aaPredicted RBP12.21□□□□□ -0.45
GTF3C3-204ENST00000435252 DCBLD2Q96PD2 775 aa12.21□□□□□ -0.45
GTF3C3-204ENST00000435252 STK24Q9Y6E0 443 aa12.21□□□□□ -0.45
GTF3C3-204ENST00000435252 BCL11BQ9C0K0 894 aaPredicted RBP12.2□□□□□ -0.46
GTF3C3-204ENST00000435252 TIE1P35590 1138 aa12.17□□□□□ -0.46
GTF3C3-204ENST00000435252 GOLGA2Q08379 1002 aa12.16□□□□□ -0.46
GTF3C3-204ENST00000435252 TMEM106CQ9BVX2 250 aa12.14□□□□□ -0.47
GTF3C3-204ENST00000435252 DNAJC5Q9H3Z4 198 aa12.14□□□□□ -0.47
GTF3C3-204ENST00000435252 RYDENQ9NUL5 291 aaKnown RBP12.13□□□□□ -0.47
GTF3C3-204ENST00000435252 ASTLQ6HA08 431 aaPredicted RBP12.12□□□□□ -0.47
GTF3C3-204ENST00000435252 POTEIP0CG38 1075 aa12.08□□□□□ -0.48
GTF3C3-204ENST00000435252 CABP2Q9NPB3 220 aa12.08□□□□□ -0.48
GTF3C3-204ENST00000435252 TTLL13PA6NNM8 815 aa12.06□□□□□ -0.48
GTF3C3-204ENST00000435252 ATMINO43313 823 aaPredicted RBP12.06□□□□□ -0.48
GTF3C3-204ENST00000435252 TRPC6Q9Y210 931 aa12.06□□□□□ -0.48
GTF3C3-204ENST00000435252 PLCB2Q00722 1185 aa12.05□□□□□ -0.48
GTF3C3-204ENST00000435252 MKRN3Q13064 507 aaKnown RBP12.05□□□□□ -0.48
GTF3C3-204ENST00000435252 SPRYD3Q8NCJ5 442 aa12.05□□□□□ -0.48
GTF3C3-204ENST00000435252 BMP2KQ9NSY1 1161 aaPredicted RBP12.05□□□□□ -0.48
GTF3C3-204ENST00000435252 SOX12O15370 315 aa12.02□□□□□ -0.49
GTF3C3-204ENST00000435252 PAXIP1Q6ZW49 1069 aaPredicted RBP12.02□□□□□ -0.49
GTF3C3-204ENST00000435252 CFAP44Q96MT7 982 aa12.01□□□□□ -0.49
GTF3C3-204ENST00000435252 TRIM35Q9UPQ4 493 aa12.01□□□□□ -0.49
GTF3C3-204ENST00000435252 SLC39A7Q92504 469 aa12□□□□□ -0.49
GTF3C3-204ENST00000435252 EFCAB3Q8N7B9 438 aa11.99□□□□□ -0.49
GTF3C3-204ENST00000435252 C7P10643 843 aa11.98□□□□□ -0.49
GTF3C3-204ENST00000435252 ATN1P54259 1190 aaPredicted RBP11.98□□□□□ -0.49
GTF3C3-204ENST00000435252 NLRP6P59044 892 aa11.98□□□□□ -0.49
GTF3C3-204ENST00000435252 IER5LQ5T953 404 aa11.97□□□□□ -0.49
GTF3C3-204ENST00000435252 NKX1-1Q15270 411 aaPredicted RBP11.96□□□□□ -0.49
GTF3C3-204ENST00000435252 PELP1Q8IZL8 1130 aaKnown RBP11.93□□□□□ -0.5
GTF3C3-204ENST00000435252 SLC24A1O60721 1099 aa11.92□□□□□ -0.5
GTF3C3-204ENST00000435252 MFRPQ9BY79 579 aa11.92□□□□□ -0.5
GTF3C3-204ENST00000435252 GTPBP6O43824 516 aaPredicted RBP11.91□□□□□ -0.5
GTF3C3-204ENST00000435252 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.9□□□□□ -0.54e-8■■□□□ 13.3
GTF3C3-204ENST00000435252 HAP1P54257 671 aaPredicted RBP11.89□□□□□ -0.51
GTF3C3-204ENST00000435252 METRNQ9UJH8 293 aa11.89□□□□□ -0.51
GTF3C3-204ENST00000435252 PHF8Q9UPP1 1060 aa11.89□□□□□ -0.51
GTF3C3-204ENST00000435252 SEC24BO95487 1268 aa11.86□□□□□ -0.51
GTF3C3-204ENST00000435252 PLCG2P16885 1265 aa11.85□□□□□ -0.51
GTF3C3-204ENST00000435252 FBXO22Q8NEZ5 403 aa11.85□□□□□ -0.51
GTF3C3-204ENST00000435252 OCEL1Q9H607 264 aa11.84□□□□□ -0.51
GTF3C3-204ENST00000435252 G3V3G9 751 aa11.82□□□□□ -0.52
GTF3C3-204ENST00000435252 IRX5P78411 483 aaPredicted RBP11.81□□□□□ -0.52
GTF3C3-204ENST00000435252 LHX8Q68G74 356 aa11.81□□□□□ -0.52
GTF3C3-204ENST00000435252 ILDR1Q86SU0 546 aaPredicted RBP11.8□□□□□ -0.52
GTF3C3-204ENST00000435252 MS4A4AQ96JQ5 239 aa11.77□□□□□ -0.53
GTF3C3-204ENST00000435252 PDCD7Q8N8D1 485 aaKnown RBP11.75□□□□□ -0.53
GTF3C3-204ENST00000435252 L3MBTL3Q96JM7 780 aaPredicted RBP11.75□□□□□ -0.53
GTF3C3-204ENST00000435252 POTEFA5A3E0 1075 aa11.74□□□□□ -0.53
GTF3C3-204ENST00000435252 MAMSTRQ6ZN01 415 aa11.74□□□□□ -0.53
GTF3C3-204ENST00000435252 COLQQ9Y215 455 aaPredicted RBP11.73□□□□□ -0.53
GTF3C3-204ENST00000435252 VSIG10Q8N0Z9 540 aa11.72□□□□□ -0.53
GTF3C3-204ENST00000435252 TSHZ2Q9NRE2 1034 aa11.71□□□□□ -0.53
GTF3C3-204ENST00000435252 PPP1R37O75864 691 aa11.7□□□□□ -0.54
GTF3C3-204ENST00000435252 BOLA1Q9Y3E2 137 aa11.69□□□□□ -0.54
GTF3C3-204ENST00000435252 POTEB2H3BUK9 544 aa11.68□□□□□ -0.54
GTF3C3-204ENST00000435252 DPY19L2Q6NUT2 758 aa11.66□□□□□ -0.54
GTF3C3-204ENST00000435252 MICALL2Q8IY33 904 aa11.66□□□□□ -0.54
GTF3C3-204ENST00000435252 SCUBE2Q9NQ36 999 aa11.65□□□□□ -0.54
GTF3C3-204ENST00000435252 C3orf67Q6ZVT6 689 aa11.63□□□□□ -0.55
GTF3C3-204ENST00000435252 WDR70Q9NW82 654 aa11.61□□□□□ -0.55
GTF3C3-204ENST00000435252 TMEM121BQ9BXQ6 578 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms