RNA–Protein interactions for RNA: ENST00000434073.1

PCDH9-AS3-201, PCDH9 antisense RNA 3, humanhuman

TSL 2 BASIC

Gene PCDH9-AS3, Length 479 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-AS3-201ENST00000434073 DCAF8Q5TAQ9 597 aa12.92□□□□□ -0.34
PCDH9-AS3-201ENST00000434073 ZNF579Q8NAF0 562 aaKnown RBP12.92□□□□□ -0.34
PCDH9-AS3-201ENST00000434073 CIZ1Q9ULV3 898 aaPredicted RBP12.88□□□□□ -0.35
PCDH9-AS3-201ENST00000434073 TRIM41Q8WV44 630 aa12.85□□□□□ -0.35
PCDH9-AS3-201ENST00000434073 PKD2Q13563 968 aa12.84□□□□□ -0.35
PCDH9-AS3-201ENST00000434073 AMER1Q5JTC6 1135 aaPredicted RBP12.83□□□□□ -0.36
PCDH9-AS3-201ENST00000434073 CHRM1P11229 460 aaPredicted RBP12.82□□□□□ -0.36
PCDH9-AS3-201ENST00000434073 PHF12Q96QT6 1004 aa12.82□□□□□ -0.36
PCDH9-AS3-201ENST00000434073 CLCN6P51797 869 aa12.81□□□□□ -0.36
PCDH9-AS3-201ENST00000434073 SP7Q8TDD2 431 aaPredicted RBP12.8□□□□□ -0.36
PCDH9-AS3-201ENST00000434073 KIF12Q96FN5 646 aa12.79□□□□□ -0.36
PCDH9-AS3-201ENST00000434073 PYGBP11216 843 aa12.78□□□□□ -0.36
PCDH9-AS3-201ENST00000434073 SGIP1Q9BQI5 828 aa12.76□□□□□ -0.37
PCDH9-AS3-201ENST00000434073 RTN4Q9NQC3 1192 aaKnown RBP12.75□□□□□ -0.37
PCDH9-AS3-201ENST00000434073 MAP3K13O43283 966 aa12.74□□□□□ -0.37
PCDH9-AS3-201ENST00000434073 ECM2O94769 699 aaPredicted RBP12.72□□□□□ -0.37
PCDH9-AS3-201ENST00000434073 GABBR2O75899 941 aa12.71□□□□□ -0.37
PCDH9-AS3-201ENST00000434073 PCDHB13Q9Y5F0 798 aa12.7□□□□□ -0.38
PCDH9-AS3-201ENST00000434073 MS4A3Q96HJ5 214 aa12.69□□□□□ -0.38
PCDH9-AS3-201ENST00000434073 ZNF467Q7Z7K2 595 aaPredicted RBP12.67□□□□□ -0.38
PCDH9-AS3-201ENST00000434073 GALR2O43603 387 aaPredicted RBP12.66□□□□□ -0.38
PCDH9-AS3-201ENST00000434073 IFNL1Q8IU54 200 aa12.66□□□□□ -0.38
PCDH9-AS3-201ENST00000434073 RNF25Q96BH1 459 aaPredicted RBP12.66□□□□□ -0.38
PCDH9-AS3-201ENST00000434073 RIOK3O14730 519 aaKnown RBP12.61□□□□□ -0.39
PCDH9-AS3-201ENST00000434073 RGL2O15211 777 aa12.61□□□□□ -0.39
PCDH9-AS3-201ENST00000434073 PCDHB8Q9UN66 801 aa12.61□□□□□ -0.39
PCDH9-AS3-201ENST00000434073 TRPC6Q9Y210 931 aa12.56□□□□□ -0.4
PCDH9-AS3-201ENST00000434073 TIE1P35590 1138 aa12.55□□□□□ -0.4
PCDH9-AS3-201ENST00000434073 VGFO15240 615 aaPredicted RBP12.54□□□□□ -0.4
PCDH9-AS3-201ENST00000434073 PDAP1Q13442 181 aaKnown RBP12.54□□□□□ -0.4
PCDH9-AS3-201ENST00000434073 TAOK2Q9UL54 1235 aa12.53□□□□□ -0.4
PCDH9-AS3-201ENST00000434073 PSEN1P49768 467 aa12.5□□□□□ -0.41
PCDH9-AS3-201ENST00000434073 ASTLQ6HA08 431 aaPredicted RBP12.5□□□□□ -0.41
PCDH9-AS3-201ENST00000434073 BMP2KQ9NSY1 1161 aaPredicted RBP12.5□□□□□ -0.41
PCDH9-AS3-201ENST00000434073 TTLL13PA6NNM8 815 aa12.48□□□□□ -0.41
PCDH9-AS3-201ENST00000434073 DCBLD2Q96PD2 775 aa12.48□□□□□ -0.41
PCDH9-AS3-201ENST00000434073 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.46□□□□□ -0.41
PCDH9-AS3-201ENST00000434073 ATMINO43313 823 aaPredicted RBP12.46□□□□□ -0.41
PCDH9-AS3-201ENST00000434073 POTEIP0CG38 1075 aa12.46□□□□□ -0.41
PCDH9-AS3-201ENST00000434073 ZFP91Q96JP5 570 aaPredicted RBP12.46□□□□□ -0.41
PCDH9-AS3-201ENST00000434073 TMEM106CQ9BVX2 250 aa12.46□□□□□ -0.41
PCDH9-AS3-201ENST00000434073 ATN1P54259 1190 aaPredicted RBP12.42□□□□□ -0.42
PCDH9-AS3-201ENST00000434073 HS6ST3Q8IZP7 471 aa12.39□□□□□ -0.43
PCDH9-AS3-201ENST00000434073 STK25O00506 426 aa12.38□□□□□ -0.43
PCDH9-AS3-201ENST00000434073 BCL11BQ9C0K0 894 aaPredicted RBP12.38□□□□□ -0.43
PCDH9-AS3-201ENST00000434073 TRIM35Q9UPQ4 493 aa12.38□□□□□ -0.43
PCDH9-AS3-201ENST00000434073 DCAF8L2P0C7V8 631 aa12.37□□□□□ -0.43
PCDH9-AS3-201ENST00000434073 PELP1Q8IZL8 1130 aaKnown RBP12.36□□□□□ -0.43
PCDH9-AS3-201ENST00000434073 CHGAP10645 457 aaKnown RBP12.34□□□□□ -0.43
PCDH9-AS3-201ENST00000434073 STK24Q9Y6E0 443 aa12.34□□□□□ -0.43
PCDH9-AS3-201ENST00000434073 IER5LQ5T953 404 aa12.33□□□□□ -0.44
PCDH9-AS3-201ENST00000434073 DNAJC5Q9H3Z4 198 aa12.33□□□□□ -0.44
PCDH9-AS3-201ENST00000434073 CABP2Q9NPB3 220 aa12.33□□□□□ -0.44
PCDH9-AS3-201ENST00000434073 SLC39A7Q92504 469 aa12.31□□□□□ -0.44
PCDH9-AS3-201ENST00000434073 GOLGA2Q08379 1002 aa12.3□□□□□ -0.44
PCDH9-AS3-201ENST00000434073 C7P10643 843 aa12.28□□□□□ -0.44
PCDH9-AS3-201ENST00000434073 EFCAB3Q8N7B9 438 aa12.27□□□□□ -0.45
PCDH9-AS3-201ENST00000434073 MKRN3Q13064 507 aaKnown RBP12.26□□□□□ -0.45
PCDH9-AS3-201ENST00000434073 ILDR1Q86SU0 546 aaPredicted RBP12.25□□□□□ -0.45
PCDH9-AS3-201ENST00000434073 METRNQ9UJH8 293 aa12.25□□□□□ -0.45
PCDH9-AS3-201ENST00000434073 SOX12O15370 315 aa12.24□□□□□ -0.45
PCDH9-AS3-201ENST00000434073 IRX5P78411 483 aaPredicted RBP12.24□□□□□ -0.45
PCDH9-AS3-201ENST00000434073 POTEFA5A3E0 1075 aa12.2□□□□□ -0.46
PCDH9-AS3-201ENST00000434073 NKX1-1Q15270 411 aaPredicted RBP12.19□□□□□ -0.46
PCDH9-AS3-201ENST00000434073 MFRPQ9BY79 579 aa12.19□□□□□ -0.46
PCDH9-AS3-201ENST00000434073 PDCD7Q8N8D1 485 aaKnown RBP12.18□□□□□ -0.46
PCDH9-AS3-201ENST00000434073 BBXQ8WY36 941 aaPredicted RBP12.18□□□□□ -0.46
PCDH9-AS3-201ENST00000434073 OCEL1Q9H607 264 aa12.18□□□□□ -0.46
PCDH9-AS3-201ENST00000434073 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.18□□□□□ -0.46
PCDH9-AS3-201ENST00000434073 COLQQ9Y215 455 aaPredicted RBP12.18□□□□□ -0.46
PCDH9-AS3-201ENST00000434073 FBXO22Q8NEZ5 403 aa12.17□□□□□ -0.46
PCDH9-AS3-201ENST00000434073 PLCG2P16885 1265 aa12.16□□□□□ -0.46
PCDH9-AS3-201ENST00000434073 PHF8Q9UPP1 1060 aa12.16□□□□□ -0.46
PCDH9-AS3-201ENST00000434073 SEC24BO95487 1268 aa12.15□□□□□ -0.46
PCDH9-AS3-201ENST00000434073 NLRP6P59044 892 aa12.15□□□□□ -0.46
PCDH9-AS3-201ENST00000434073 MS4A4AQ96JQ5 239 aa12.13□□□□□ -0.47
PCDH9-AS3-201ENST00000434073 RYDENQ9NUL5 291 aaKnown RBP12.11□□□□□ -0.47
PCDH9-AS3-201ENST00000434073 GTPBP6O43824 516 aaPredicted RBP12.07□□□□□ -0.48
PCDH9-AS3-201ENST00000434073 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.07□□□□□ -0.48
PCDH9-AS3-201ENST00000434073 POTEB2H3BUK9 544 aa12.05□□□□□ -0.48
PCDH9-AS3-201ENST00000434073 DPY19L2Q6NUT2 758 aa12.05□□□□□ -0.48
PCDH9-AS3-201ENST00000434073 L3MBTL3Q96JM7 780 aaPredicted RBP12.02□□□□□ -0.49
PCDH9-AS3-201ENST00000434073 POTEJP0CG39 1038 aa12.01□□□□□ -0.49
PCDH9-AS3-201ENST00000434073 TMEM121BQ9BXQ6 578 aaPredicted RBP12□□□□□ -0.49
PCDH9-AS3-201ENST00000434073 LHX8Q68G74 356 aa11.99□□□□□ -0.49
PCDH9-AS3-201ENST00000434073 SPRYD3Q8NCJ5 442 aa11.99□□□□□ -0.49
PCDH9-AS3-201ENST00000434073 BOLA1Q9Y3E2 137 aa11.99□□□□□ -0.49
PCDH9-AS3-201ENST00000434073 PPP1R37O75864 691 aa11.98□□□□□ -0.49
PCDH9-AS3-201ENST00000434073 MICALL2Q8IY33 904 aa11.96□□□□□ -0.49
PCDH9-AS3-201ENST00000434073 PAXIP1Q6ZW49 1069 aaPredicted RBP11.95□□□□□ -0.5
PCDH9-AS3-201ENST00000434073 MAMSTRQ6ZN01 415 aa11.94□□□□□ -0.5
PCDH9-AS3-201ENST00000434073 G3V3G9 751 aa11.93□□□□□ -0.5
PCDH9-AS3-201ENST00000434073 CFAP44Q96MT7 982 aa11.92□□□□□ -0.5
PCDH9-AS3-201ENST00000434073 PLCB2Q00722 1185 aa11.9□□□□□ -0.5
PCDH9-AS3-201ENST00000434073 C3orf67Q6ZVT6 689 aa11.89□□□□□ -0.51
PCDH9-AS3-201ENST00000434073 SCUBE2Q9NQ36 999 aa11.89□□□□□ -0.51
PCDH9-AS3-201ENST00000434073 OTUD5Q96G74 571 aa11.88□□□□□ -0.51
PCDH9-AS3-201ENST00000434073 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.86□□□□□ -0.51
PCDH9-AS3-201ENST00000434073 TMEM92Q6UXU6 159 aa11.8□□□□□ -0.52
PCDH9-AS3-201ENST00000434073 KIF3CO14782 793 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms