RNA–Protein interactions for RNA: ENST00000433889.1

SCG2-203, Transcript of secretogranin II, humanhuman

TSL 4

Gene SCG2, Length 544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-203ENST00000433889 POTEJP0CG39 1038 aa9.84□□□□□ -0.83
SCG2-203ENST00000433889 METRNQ9UJH8 293 aa9.83□□□□□ -0.84
SCG2-203ENST00000433889 TSPYL2Q9H2G4 693 aaPredicted RBP9.81□□□□□ -0.84
SCG2-203ENST00000433889 CCDC61Q9Y6R9 512 aa9.8□□□□□ -0.84
SCG2-203ENST00000433889 POTEMA6NI47 508 aa9.79□□□□□ -0.84
SCG2-203ENST00000433889 C7P10643 843 aa9.78□□□□□ -0.84
SCG2-203ENST00000433889 SLC39A7Q92504 469 aa9.78□□□□□ -0.84
SCG2-203ENST00000433889 ATN1P54259 1190 aaPredicted RBP9.76□□□□□ -0.85
SCG2-203ENST00000433889 POTEGQ6S5H5 508 aa9.76□□□□□ -0.85
SCG2-203ENST00000433889 KIF12Q96FN5 646 aa9.75□□□□□ -0.85
SCG2-203ENST00000433889 TRPC6Q9Y210 931 aa9.74□□□□□ -0.85
SCG2-203ENST00000433889 POTEFA5A3E0 1075 aa9.71□□□□□ -0.86
SCG2-203ENST00000433889 LCE2DQ5TA82 110 aaPredicted RBP9.7□□□□□ -0.86
SCG2-203ENST00000433889 BMP2KQ9NSY1 1161 aaPredicted RBP9.7□□□□□ -0.86
SCG2-203ENST00000433889 RASEFQ8IZ41 740 aa9.69□□□□□ -0.86
SCG2-203ENST00000433889 MAP3K13O43283 966 aa9.68□□□□□ -0.86
SCG2-203ENST00000433889 MAMSTRQ6ZN01 415 aa9.67□□□□□ -0.86
SCG2-203ENST00000433889 MIER1Q8N108 512 aa9.65□□□□□ -0.86
SCG2-203ENST00000433889 TIE1P35590 1138 aa9.63□□□□□ -0.87
SCG2-203ENST00000433889 SCUBE2Q9NQ36 999 aa9.62□□□□□ -0.87
SCG2-203ENST00000433889 COLQQ9Y215 455 aaPredicted RBP9.61□□□□□ -0.87
SCG2-203ENST00000433889 FAM163AQ96GL9 167 aaPredicted RBP9.6□□□□□ -0.87
SCG2-203ENST00000433889 TTLL13PA6NNM8 815 aa9.59□□□□□ -0.87
SCG2-203ENST00000433889 PLEKHG5O94827 1062 aa9.58□□□□□ -0.88
SCG2-203ENST00000433889 PCDH10Q9P2E7 1040 aa9.58□□□□□ -0.88
SCG2-203ENST00000433889 NUBP1P53384 320 aa9.53□□□□□ -0.88
SCG2-203ENST00000433889 PLCD3Q8N3E9 789 aa9.53□□□□□ -0.88
SCG2-203ENST00000433889 PCDHB13Q9Y5F0 798 aa9.53□□□□□ -0.88
SCG2-203ENST00000433889 TRIM35Q9UPQ4 493 aa9.52□□□□□ -0.89
SCG2-203ENST00000433889 SEC24BO95487 1268 aa9.51□□□□□ -0.89
SCG2-203ENST00000433889 SGIP1Q9BQI5 828 aa9.51□□□□□ -0.89
SCG2-203ENST00000433889 IFNL1Q8IU54 200 aa9.5□□□□□ -0.89
SCG2-203ENST00000433889 IER5LQ5T953 404 aa9.49□□□□□ -0.89
SCG2-203ENST00000433889 TMEM106CQ9BVX2 250 aa9.43□□□□□ -0.9
SCG2-203ENST00000433889 ZBTB47Q9UFB7 747 aaPredicted RBP9.43□□□□□ -0.9
SCG2-203ENST00000433889 FAM212AQ96EL1 285 aa9.41□□□□□ -0.9
SCG2-203ENST00000433889 CDAN1Q8IWY9 1227 aa9.4□□□□□ -0.9
SCG2-203ENST00000433889 SLAIN1Q8ND83 568 aa9.4□□□□□ -0.9
SCG2-203ENST00000433889 IRX5P78411 483 aaPredicted RBP9.39□□□□□ -0.91
SCG2-203ENST00000433889 ST18O60284 1047 aa9.38□□□□□ -0.91
SCG2-203ENST00000433889 PLCG2P16885 1265 aa9.36□□□□□ -0.91
SCG2-203ENST00000433889 FKBP8Q14318 412 aa9.36□□□□□ -0.91
SCG2-203ENST00000433889 PYGBP11216 843 aa9.33□□□□□ -0.92
SCG2-203ENST00000433889 PCDHB8Q9UN66 801 aa9.32□□□□□ -0.92
SCG2-203ENST00000433889 DCAF8Q5TAQ9 597 aa9.31□□□□□ -0.92
SCG2-203ENST00000433889 OCEL1Q9H607 264 aa9.3□□□□□ -0.92
SCG2-203ENST00000433889 PDCD7Q8N8D1 485 aaKnown RBP9.23□□□□□ -0.93
SCG2-203ENST00000433889 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.22□□□□□ -0.93
SCG2-203ENST00000433889 MARVELD3Q96A59 401 aa9.21□□□□□ -0.94
SCG2-203ENST00000433889 TMEM121BQ9BXQ6 578 aaPredicted RBP9.21□□□□□ -0.94
SCG2-203ENST00000433889 SPNS2Q8IVW8 549 aa9.19□□□□□ -0.94
SCG2-203ENST00000433889 SNPHO15079 494 aa9.18□□□□□ -0.94
SCG2-203ENST00000433889 MMRN1Q13201 1228 aa9.18□□□□□ -0.94
SCG2-203ENST00000433889 FBXO3Q9UK99 471 aa9.18□□□□□ -0.94
SCG2-203ENST00000433889 ZNF467Q7Z7K2 595 aaPredicted RBP9.15□□□□□ -0.94
SCG2-203ENST00000433889 VASPP50552 380 aaPredicted RBP9.14□□□□□ -0.95
SCG2-203ENST00000433889 CHRM1P11229 460 aaPredicted RBP9.13□□□□□ -0.95
SCG2-203ENST00000433889 GSE1Q14687 1217 aa9.13□□□□□ -0.95
SCG2-203ENST00000433889 KLHL34Q8N239 644 aa9.13□□□□□ -0.95
SCG2-203ENST00000433889 MKRN3Q13064 507 aaKnown RBP9.12□□□□□ -0.95
SCG2-203ENST00000433889 C3orf67Q6ZVT6 689 aa9.12□□□□□ -0.95
SCG2-203ENST00000433889 POTEB3A0JP26 581 aa9.11□□□□□ -0.95
SCG2-203ENST00000433889 PSEN1P49768 467 aa9.11□□□□□ -0.95
SCG2-203ENST00000433889 POTEBQ6S5H4 581 aa9.11□□□□□ -0.95
SCG2-203ENST00000433889 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.11□□□□□ -0.95
SCG2-203ENST00000433889 GOLGA2Q08379 1002 aa9.1□□□□□ -0.95
SCG2-203ENST00000433889 L3MBTL3Q96JM7 780 aaPredicted RBP9.1□□□□□ -0.95
SCG2-203ENST00000433889 ILDR1Q86SU0 546 aaPredicted RBP9.09□□□□□ -0.95
SCG2-203ENST00000433889 EMP3P54852 163 aa9.08□□□□□ -0.96
SCG2-203ENST00000433889 DPY19L2Q6NUT2 758 aa9.08□□□□□ -0.96
SCG2-203ENST00000433889 KRTAP3-3Q9BYR6 98 aa9.07□□□□□ -0.96
SCG2-203ENST00000433889 KRTAP3-2Q9BYR7 98 aa9.07□□□□□ -0.96
SCG2-203ENST00000433889 HS3ST6Q96QI5 342 aa9.05□□□□□ -0.96
SCG2-203ENST00000433889 FAM205CA6NFA0 338 aa9.03□□□□□ -0.96
SCG2-203ENST00000433889 PDAP1Q13442 181 aaKnown RBP9.03□□□□□ -0.96
SCG2-203ENST00000433889 HOXB3P14651 431 aaPredicted RBP9.01□□□□□ -0.97
SCG2-203ENST00000433889 CABP2Q9NPB3 220 aa9.01□□□□□ -0.97
SCG2-203ENST00000433889 IFNLR1Q8IU57 520 aaPredicted RBP8.98□□□□□ -0.97
SCG2-203ENST00000433889 BOLA1Q9Y3E2 137 aa8.98□□□□□ -0.97
SCG2-203ENST00000433889 SPOCK2Q92563 424 aa8.96□□□□□ -0.98
SCG2-203ENST00000433889 CIZ1Q9ULV3 898 aaPredicted RBP8.96□□□□□ -0.98
SCG2-203ENST00000433889 G3V3G9 751 aa8.91□□□□□ -0.98
SCG2-203ENST00000433889 HOXB1P14653 301 aaPredicted RBP8.91□□□□□ -0.98
SCG2-203ENST00000433889 EFCAB3Q8N7B9 438 aa8.89□□□□□ -0.99
SCG2-203ENST00000433889 ZNF710Q8N1W2 664 aa8.87□□□□□ -0.99
SCG2-203ENST00000433889 DOK7Q18PE1 504 aa8.86□□□□□ -0.99
SCG2-203ENST00000433889 TMEM92Q6UXU6 159 aa8.86□□□□□ -0.99
SCG2-203ENST00000433889 ERBB3P21860 1342 aa8.85□□□□□ -0.99
SCG2-203ENST00000433889 VARS2Q5ST30 1063 aaKnown RBP8.82□□□□□ -1
SCG2-203ENST00000433889 MICALL2Q8IY33 904 aa8.82□□□□□ -1
SCG2-203ENST00000433889 MS4A4AQ96JQ5 239 aa8.8□□□□□ -1
SCG2-203ENST00000433889 GPR153Q6NV75 609 aa8.78□□□□□ -1
SCG2-203ENST00000433889 RNF25Q96BH1 459 aaPredicted RBP8.78□□□□□ -1
SCG2-203ENST00000433889 RIMBP2O15034 1052 aa8.77□□□□□ -1.01
SCG2-203ENST00000433889 TRIM41Q8WV44 630 aa8.77□□□□□ -1.01
SCG2-203ENST00000433889 RNF166Q96A37 237 aaPredicted RBP8.77□□□□□ -1.01
SCG2-203ENST00000433889 ZNF687Q8N1G0 1237 aa8.75□□□□□ -1.01
SCG2-203ENST00000433889 ZSWIM6Q9HCJ5 1215 aa8.75□□□□□ -1.01
SCG2-203ENST00000433889 PHF8Q9UPP1 1060 aa8.75□□□□□ -1.01
SCG2-203ENST00000433889 SOX12O15370 315 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms