RNA–Protein interactions for RNA: ENST00000433661.1

PTP4A1P3-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 3, humanhuman

BASIC

Gene PTP4A1P3, Length 420 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P3-201ENST00000433661 RNF25Q96BH1 459 aaPredicted RBP12.54□□□□□ -0.4
PTP4A1P3-201ENST00000433661 TAOK2Q9UL54 1235 aa12.53□□□□□ -0.4
PTP4A1P3-201ENST00000433661 HAP1P54257 671 aaPredicted RBP12.51□□□□□ -0.41
PTP4A1P3-201ENST00000433661 DCAF8Q5TAQ9 597 aa12.5□□□□□ -0.41
PTP4A1P3-201ENST00000433661 SGIP1Q9BQI5 828 aa12.49□□□□□ -0.41
PTP4A1P3-201ENST00000433661 RIOK3O14730 519 aaKnown RBP12.48□□□□□ -0.41
PTP4A1P3-201ENST00000433661 RASEFQ8IZ41 740 aa12.48□□□□□ -0.41
PTP4A1P3-201ENST00000433661 CHGAP10645 457 aaKnown RBP12.47□□□□□ -0.41
PTP4A1P3-201ENST00000433661 SPRYD3Q8NCJ5 442 aa12.46□□□□□ -0.41
PTP4A1P3-201ENST00000433661 PAXIP1Q6ZW49 1069 aaPredicted RBP12.44□□□□□ -0.42
PTP4A1P3-201ENST00000433661 VGFO15240 615 aaPredicted RBP12.42□□□□□ -0.42
PTP4A1P3-201ENST00000433661 FXR2P51116 673 aaKnown RBP eCLIP12.38□□□□□ -0.43
PTP4A1P3-201ENST00000433661 CFAP44Q96MT7 982 aa12.37□□□□□ -0.43
PTP4A1P3-201ENST00000433661 FARP1Q9Y4F1 1045 aaPredicted RBP12.36□□□□□ -0.43
PTP4A1P3-201ENST00000433661 KDM2AQ9Y2K7 1162 aa12.32□□□□□ -0.44
PTP4A1P3-201ENST00000433661 NKX1-1Q15270 411 aaPredicted RBP12.3□□□□□ -0.44
PTP4A1P3-201ENST00000433661 CHADLQ6NUI6 762 aa12.3□□□□□ -0.44
PTP4A1P3-201ENST00000433661 PYGBP11216 843 aa12.27□□□□□ -0.45
PTP4A1P3-201ENST00000433661 PRKAR2AP13861 404 aaKnown RBP12.27□□□□□ -0.45
PTP4A1P3-201ENST00000433661 BCANQ96GW7 911 aa12.27□□□□□ -0.45
PTP4A1P3-201ENST00000433661 STK25O00506 426 aa12.26□□□□□ -0.45
PTP4A1P3-201ENST00000433661 GTPBP6O43824 516 aaPredicted RBP12.26□□□□□ -0.45
PTP4A1P3-201ENST00000433661 ZNF467Q7Z7K2 595 aaPredicted RBP12.26□□□□□ -0.45
PTP4A1P3-201ENST00000433661 RYDENQ9NUL5 291 aaKnown RBP12.26□□□□□ -0.45
PTP4A1P3-201ENST00000433661 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.25□□□□□ -0.45
PTP4A1P3-201ENST00000433661 ZFP91Q96JP5 570 aaPredicted RBP12.25□□□□□ -0.45
PTP4A1P3-201ENST00000433661 TSHZ2Q9NRE2 1034 aa12.25□□□□□ -0.45
PTP4A1P3-201ENST00000433661 CCDC61Q9Y6R9 512 aa12.25□□□□□ -0.45
PTP4A1P3-201ENST00000433661 CHRDL2Q6WN34 429 aa12.23□□□□□ -0.45
PTP4A1P3-201ENST00000433661 BCL11BQ9C0K0 894 aaPredicted RBP12.21□□□□□ -0.45
PTP4A1P3-201ENST00000433661 PIP4P2Q8N4L2 257 aa12.18□□□□□ -0.46
PTP4A1P3-201ENST00000433661 ZNF579Q8NAF0 562 aaKnown RBP12.18□□□□□ -0.46
PTP4A1P3-201ENST00000433661 TSPYL2Q9H2G4 693 aaPredicted RBP12.18□□□□□ -0.46
PTP4A1P3-201ENST00000433661 STK24Q9Y6E0 443 aa12.17□□□□□ -0.46
PTP4A1P3-201ENST00000433661 PDAP1Q13442 181 aaKnown RBP12.16□□□□□ -0.46
PTP4A1P3-201ENST00000433661 PAK3O75914 559 aaPredicted RBP12.13□□□□□ -0.47
PTP4A1P3-201ENST00000433661 KIF12Q96FN5 646 aa12.07□□□□□ -0.48
PTP4A1P3-201ENST00000433661 PSEN1P49768 467 aa12.05□□□□□ -0.48
PTP4A1P3-201ENST00000433661 PCDHB8Q9UN66 801 aa12.05□□□□□ -0.48
PTP4A1P3-201ENST00000433661 PCDHB13Q9Y5F0 798 aa12.05□□□□□ -0.48
PTP4A1P3-201ENST00000433661 IFNL1Q8IU54 200 aa12.02□□□□□ -0.49
PTP4A1P3-201ENST00000433661 MAP3K13O43283 966 aa12□□□□□ -0.49
PTP4A1P3-201ENST00000433661 MFRPQ9BY79 579 aa11.97□□□□□ -0.49
PTP4A1P3-201ENST00000433661 CD44P16070 742 aaKnown RBP11.96□□□□□ -0.49
PTP4A1P3-201ENST00000433661 SOX12O15370 315 aa11.95□□□□□ -0.5
PTP4A1P3-201ENST00000433661 ZRANB1Q9UGI0 708 aa11.93□□□□□ -0.5
PTP4A1P3-201ENST00000433661 C19orf67A6NJJ6 358 aa11.92□□□□□ -0.5
PTP4A1P3-201ENST00000433661 FBXO22Q8NEZ5 403 aa11.92□□□□□ -0.5
PTP4A1P3-201ENST00000433661 NLRP6P59044 892 aa11.89□□□□□ -0.51
PTP4A1P3-201ENST00000433661 NBR1Q14596 966 aa11.87□□□□□ -0.51
PTP4A1P3-201ENST00000433661 P3H3Q8IVL6 736 aa11.86□□□□□ -0.51
PTP4A1P3-201ENST00000433661 EFCAB3Q8N7B9 438 aa11.86□□□□□ -0.51
PTP4A1P3-201ENST00000433661 PHF12Q96QT6 1004 aa11.85□□□□□ -0.51
PTP4A1P3-201ENST00000433661 CABP2Q9NPB3 220 aa11.84□□□□□ -0.51
PTP4A1P3-201ENST00000433661 CLCN6P51797 869 aa11.83□□□□□ -0.52
PTP4A1P3-201ENST00000433661 CADPS2Q86UW7 1296 aa11.82□□□□□ -0.52
PTP4A1P3-201ENST00000433661 TIE1P35590 1138 aa11.79□□□□□ -0.52
PTP4A1P3-201ENST00000433661 ILDR1Q86SU0 546 aaPredicted RBP11.79□□□□□ -0.52
PTP4A1P3-201ENST00000433661 PHF8Q9UPP1 1060 aa11.79□□□□□ -0.52
PTP4A1P3-201ENST00000433661 MS4A3Q96HJ5 214 aa11.78□□□□□ -0.52
PTP4A1P3-201ENST00000433661 PPP1R37O75864 691 aa11.77□□□□□ -0.53
PTP4A1P3-201ENST00000433661 PRKCSHP14314 528 aaPredicted RBP11.75□□□□□ -0.53
PTP4A1P3-201ENST00000433661 TPRNQ4KMQ1 711 aa11.75□□□□□ -0.53
PTP4A1P3-201ENST00000433661 MS4A4AQ96JQ5 239 aa11.75□□□□□ -0.53
PTP4A1P3-201ENST00000433661 TMEM106CQ9BVX2 250 aa11.75□□□□□ -0.53
PTP4A1P3-201ENST00000433661 WDR70Q9NW82 654 aa11.74□□□□□ -0.53
PTP4A1P3-201ENST00000433661 KCNV2Q8TDN2 545 aa11.7□□□□□ -0.54
PTP4A1P3-201ENST00000433661 TRPC6Q9Y210 931 aa11.7□□□□□ -0.54
PTP4A1P3-201ENST00000433661 TTLL13PA6NNM8 815 aa11.69□□□□□ -0.54
PTP4A1P3-201ENST00000433661 GOLGA2Q08379 1002 aa11.69□□□□□ -0.54
PTP4A1P3-201ENST00000433661 MFSD10Q14728 455 aa11.68□□□□□ -0.54
PTP4A1P3-201ENST00000433661 ARHGEF1Q92888 912 aaKnown RBP11.68□□□□□ -0.54
PTP4A1P3-201ENST00000433661 MKRN3Q13064 507 aaKnown RBP11.67□□□□□ -0.54
PTP4A1P3-201ENST00000433661 CRISPLD2Q9H0B8 497 aa11.66□□□□□ -0.54
PTP4A1P3-201ENST00000433661 NCKAP5LQ9HCH0 1330 aa11.65□□□□□ -0.54
PTP4A1P3-201ENST00000433661 BMP2KQ9NSY1 1161 aaPredicted RBP11.65□□□□□ -0.54
PTP4A1P3-201ENST00000433661 ARIH1Q9Y4X5 557 aaPredicted RBP11.65□□□□□ -0.54
PTP4A1P3-201ENST00000433661 PDE4AP27815 886 aa11.63□□□□□ -0.55
PTP4A1P3-201ENST00000433661 E2F4Q16254 413 aa11.63□□□□□ -0.55
PTP4A1P3-201ENST00000433661 GALR2O43603 387 aaPredicted RBP11.59□□□□□ -0.55
PTP4A1P3-201ENST00000433661 CAMK2BQ13554 666 aa11.58□□□□□ -0.56
PTP4A1P3-201ENST00000433661 TRIM35Q9UPQ4 493 aa11.57□□□□□ -0.56
PTP4A1P3-201ENST00000433661 IER5LQ5T953 404 aa11.56□□□□□ -0.56
PTP4A1P3-201ENST00000433661 ASTLQ6HA08 431 aaPredicted RBP11.56□□□□□ -0.56
PTP4A1P3-201ENST00000433661 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.56□□□□□ -0.56
PTP4A1P3-201ENST00000433661 HAX1O00165 279 aa11.55□□□□□ -0.56
PTP4A1P3-201ENST00000433661 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.54□□□□□ -0.56
PTP4A1P3-201ENST00000433661 DDX27Q96GQ7 796 aaKnown RBP11.54□□□□□ -0.56
PTP4A1P3-201ENST00000433661 EVX2Q03828 476 aa11.53□□□□□ -0.56
PTP4A1P3-201ENST00000433661 LARP6Q9BRS8 491 aaKnown RBP11.53□□□□□ -0.56
PTP4A1P3-201ENST00000433661 PDCD7Q8N8D1 485 aaKnown RBP11.52□□□□□ -0.57
PTP4A1P3-201ENST00000433661 IRX5P78411 483 aaPredicted RBP11.51□□□□□ -0.57
PTP4A1P3-201ENST00000433661 GPHNQ9NQX3 736 aaPredicted RBP11.51□□□□□ -0.57
PTP4A1P3-201ENST00000433661 TESPA1A2RU30 521 aaPredicted RBP11.5□□□□□ -0.57
PTP4A1P3-201ENST00000433661 ATMINO43313 823 aaPredicted RBP11.5□□□□□ -0.57
PTP4A1P3-201ENST00000433661 TMEM121BQ9BXQ6 578 aaPredicted RBP11.5□□□□□ -0.57
PTP4A1P3-201ENST00000433661 ATN1P54259 1190 aaPredicted RBP11.48□□□□□ -0.57
PTP4A1P3-201ENST00000433661 TULP1O00294 542 aaPredicted RBP11.47□□□□□ -0.57
PTP4A1P3-201ENST00000433661 LMOD2Q6P5Q4 547 aa11.47□□□□□ -0.57
PTP4A1P3-201ENST00000433661 MICALL2Q8IY33 904 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms