RNA–Protein interactions for RNA: ENST00000433539.1

GINM1-202, Transcript of glycoprotein integral membrane 1, humanhuman

TSL 3

Gene GINM1, Length 563 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINM1-202ENST00000433539 POTEJP0CG39 1038 aa13.81□□□□□ -0.2
GINM1-202ENST00000433539 SCUBE2Q9NQ36 999 aa13.81□□□□□ -0.2
GINM1-202ENST00000433539 LCE2DQ5TA82 110 aaPredicted RBP13.8□□□□□ -0.2
GINM1-202ENST00000433539 NPM1P06748 294 aaKnown RBP eCLIP13.79□□□□□ -0.2
GINM1-202ENST00000433539 ATMINO43313 823 aaPredicted RBP13.77□□□□□ -0.21
GINM1-202ENST00000433539 MS4A3Q96HJ5 214 aa13.73□□□□□ -0.21
GINM1-202ENST00000433539 CDAN1Q8IWY9 1227 aa13.62□□□□□ -0.23
GINM1-202ENST00000433539 MNX1P50219 401 aaPredicted RBP13.59□□□□□ -0.23
GINM1-202ENST00000433539 ATN1P54259 1190 aaPredicted RBP13.58□□□□□ -0.24
GINM1-202ENST00000433539 TSPYL2Q9H2G4 693 aaPredicted RBP13.47□□□□□ -0.25
GINM1-202ENST00000433539 POTEFA5A3E0 1075 aa13.46□□□□□ -0.25
GINM1-202ENST00000433539 SPDYE4A6NLX3 237 aa13.46□□□□□ -0.25
GINM1-202ENST00000433539 BMP2KQ9NSY1 1161 aaPredicted RBP13.44□□□□□ -0.26
GINM1-202ENST00000433539 SEC24BO95487 1268 aa13.43□□□□□ -0.26
GINM1-202ENST00000433539 CCDC61Q9Y6R9 512 aa13.41□□□□□ -0.26
GINM1-202ENST00000433539 KIF12Q96FN5 646 aa13.4□□□□□ -0.26
GINM1-202ENST00000433539 TIE1P35590 1138 aa13.37□□□□□ -0.27
GINM1-202ENST00000433539 MMRN1Q13201 1228 aa13.35□□□□□ -0.27
GINM1-202ENST00000433539 ST18O60284 1047 aa13.34□□□□□ -0.27
GINM1-202ENST00000433539 COLQQ9Y215 455 aaPredicted RBP13.34□□□□□ -0.27
GINM1-202ENST00000433539 TRPC6Q9Y210 931 aa13.31□□□□□ -0.28
GINM1-202ENST00000433539 SPNS2Q8IVW8 549 aa13.3□□□□□ -0.28
GINM1-202ENST00000433539 SLAIN1Q8ND83 568 aa13.3□□□□□ -0.28
GINM1-202ENST00000433539 MAP3K13O43283 966 aa13.27□□□□□ -0.29
GINM1-202ENST00000433539 IER5LQ5T953 404 aa13.27□□□□□ -0.29
GINM1-202ENST00000433539 TTLL13PA6NNM8 815 aa13.26□□□□□ -0.29
GINM1-202ENST00000433539 TMEM121BQ9BXQ6 578 aaPredicted RBP13.2□□□□□ -0.3
GINM1-202ENST00000433539 TRIM35Q9UPQ4 493 aa13.19□□□□□ -0.3
GINM1-202ENST00000433539 PLEKHG5O94827 1062 aa13.11□□□□□ -0.31
GINM1-202ENST00000433539 SNPHO15079 494 aa13.1□□□□□ -0.31
GINM1-202ENST00000433539 PLCG2P16885 1265 aa13.09□□□□□ -0.31
GINM1-202ENST00000433539 SGIP1Q9BQI5 828 aa13.09□□□□□ -0.31
GINM1-202ENST00000433539 RASEFQ8IZ41 740 aa13.06□□□□□ -0.32
GINM1-202ENST00000433539 PCDHB13Q9Y5F0 798 aa13.06□□□□□ -0.32
GINM1-202ENST00000433539 MARVELD3Q96A59 401 aa13.04□□□□□ -0.32
GINM1-202ENST00000433539 TMEM106CQ9BVX2 250 aa12.98□□□□□ -0.33
GINM1-202ENST00000433539 CSRNP3Q8WYN3 585 aa12.97□□□□□ -0.33
GINM1-202ENST00000433539 MIER1Q8N108 512 aa12.96□□□□□ -0.33
GINM1-202ENST00000433539 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.96□□□□□ -0.33
GINM1-202ENST00000433539 IRX5P78411 483 aaPredicted RBP12.94□□□□□ -0.34
GINM1-202ENST00000433539 PROM2Q8N271 834 aa12.93□□□□□ -0.34
GINM1-202ENST00000433539 IFNL1Q8IU54 200 aa12.92□□□□□ -0.34
GINM1-202ENST00000433539 EMP3P54852 163 aa12.91□□□□□ -0.34
GINM1-202ENST00000433539 OCEL1Q9H607 264 aa12.91□□□□□ -0.34
GINM1-202ENST00000433539 KRTAP3-3Q9BYR6 98 aa12.83□□□□□ -0.36
GINM1-202ENST00000433539 KRTAP3-2Q9BYR7 98 aa12.83□□□□□ -0.36
GINM1-202ENST00000433539 HS3ST6Q96QI5 342 aa12.8□□□□□ -0.36
GINM1-202ENST00000433539 FAM205CA6NFA0 338 aa12.78□□□□□ -0.36
GINM1-202ENST00000433539 ZBTB47Q9UFB7 747 aaPredicted RBP12.78□□□□□ -0.36
GINM1-202ENST00000433539 C3orf67Q6ZVT6 689 aa12.77□□□□□ -0.37
GINM1-202ENST00000433539 PLCD3Q8N3E9 789 aa12.77□□□□□ -0.37
GINM1-202ENST00000433539 FAM212AQ96EL1 285 aa12.75□□□□□ -0.37
GINM1-202ENST00000433539 POTEB3A0JP26 581 aa12.73□□□□□ -0.37
GINM1-202ENST00000433539 NUBP1P53384 320 aa12.73□□□□□ -0.37
GINM1-202ENST00000433539 POTEBQ6S5H4 581 aa12.73□□□□□ -0.37
GINM1-202ENST00000433539 L3MBTL3Q96JM7 780 aaPredicted RBP12.66□□□□□ -0.38
GINM1-202ENST00000433539 RNF166Q96A37 237 aaPredicted RBP12.62□□□□□ -0.39
GINM1-202ENST00000433539 PDCD7Q8N8D1 485 aaKnown RBP12.6□□□□□ -0.39
GINM1-202ENST00000433539 GOLGA2Q08379 1002 aa12.57□□□□□ -0.4
GINM1-202ENST00000433539 PYGBP11216 843 aa12.54□□□□□ -0.4
GINM1-202ENST00000433539 MKRN3Q13064 507 aaKnown RBP12.54□□□□□ -0.4
GINM1-202ENST00000433539 PCDHB8Q9UN66 801 aa12.54□□□□□ -0.4
GINM1-202ENST00000433539 DCAF8Q5TAQ9 597 aa12.51□□□□□ -0.41
GINM1-202ENST00000433539 MYT1LQ9UL68 1186 aa12.51□□□□□ -0.41
GINM1-202ENST00000433539 ERBB3P21860 1342 aa12.49□□□□□ -0.41
GINM1-202ENST00000433539 ZNF710Q8N1W2 664 aa12.48□□□□□ -0.41
GINM1-202ENST00000433539 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.48□□□□□ -0.41
GINM1-202ENST00000433539 HOXB1P14653 301 aaPredicted RBP12.45□□□□□ -0.42
GINM1-202ENST00000433539 HOXB3P14651 431 aaPredicted RBP12.43□□□□□ -0.42
GINM1-202ENST00000433539 G3V3G9 751 aa12.4□□□□□ -0.42
GINM1-202ENST00000433539 DOK7Q18PE1 504 aa12.4□□□□□ -0.42
GINM1-202ENST00000433539 ZNF467Q7Z7K2 595 aaPredicted RBP12.4□□□□□ -0.42
GINM1-202ENST00000433539 EHMT2Q96KQ7 1210 aa12.39□□□□□ -0.43
GINM1-202ENST00000433539 PTGER2P43116 358 aa12.37□□□□□ -0.43
GINM1-202ENST00000433539 RIMBP2O15034 1052 aa12.35□□□□□ -0.43
GINM1-202ENST00000433539 VARS2Q5ST30 1063 aaKnown RBP12.35□□□□□ -0.43
GINM1-202ENST00000433539 BOLA1Q9Y3E2 137 aa12.31□□□□□ -0.44
GINM1-202ENST00000433539 ILDR1Q86SU0 546 aaPredicted RBP12.3□□□□□ -0.44
GINM1-202ENST00000433539 PSEN1P49768 467 aa12.28□□□□□ -0.44
GINM1-202ENST00000433539 DPY19L2Q6NUT2 758 aa12.28□□□□□ -0.44
GINM1-202ENST00000433539 ZNF687Q8N1G0 1237 aa12.28□□□□□ -0.44
GINM1-202ENST00000433539 GSE1Q14687 1217 aa12.23□□□□□ -0.45
GINM1-202ENST00000433539 ZSWIM6Q9HCJ5 1215 aa12.2□□□□□ -0.46
GINM1-202ENST00000433539 CHRM1P11229 460 aaPredicted RBP12.18□□□□□ -0.46
GINM1-202ENST00000433539 ANKRD13DQ6ZTN6 518 aa12.18□□□□□ -0.46
GINM1-202ENST00000433539 PDAP1Q13442 181 aaKnown RBP12.15□□□□□ -0.46
GINM1-202ENST00000433539 PLA2G2EQ9NZK7 142 aa12.15□□□□□ -0.46
GINM1-202ENST00000433539 CABP2Q9NPB3 220 aa12.14□□□□□ -0.47
GINM1-202ENST00000433539 GPR153Q6NV75 609 aa12.08□□□□□ -0.48
GINM1-202ENST00000433539 LSM11P83369 360 aaKnown RBP eCLIP12.06□□□□□ -0.48
GINM1-202ENST00000433539 KLHL34Q8N239 644 aa12.04□□□□□ -0.48
GINM1-202ENST00000433539 HCSTQ9UBK5 93 aa12.04□□□□□ -0.48
GINM1-202ENST00000433539 FBXO3Q9UK99 471 aa11.99□□□□□ -0.49
GINM1-202ENST00000433539 ARSIQ5FYB1 569 aa11.97□□□□□ -0.49
GINM1-202ENST00000433539 ZNF316A6NFI3 1004 aaPredicted RBP11.96□□□□□ -0.49
GINM1-202ENST00000433539 TMEM92Q6UXU6 159 aa11.95□□□□□ -0.5
GINM1-202ENST00000433539 MICALL2Q8IY33 904 aa11.94□□□□□ -0.5
GINM1-202ENST00000433539 PBX2P40425 430 aa11.93□□□□□ -0.5
GINM1-202ENST00000433539 FKBP8Q14318 412 aa11.89□□□□□ -0.51
GINM1-202ENST00000433539 EFCAB3Q8N7B9 438 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms