RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 ESF1Q9H501 851 aaKnown RBP15.21■□□□□ 0.03
SEC16A-206ENST00000431893 LAS1LQ9Y4W2 734 aaKnown RBP15.2■□□□□ 0.02
SEC16A-206ENST00000431893 NAP1L5Q96NT1 182 aaPredicted RBP15.19■□□□□ 0.02
SEC16A-206ENST00000431893 DNTTIP2Q5QJE6 756 aaKnown RBP15.18■□□□□ 0.02
SEC16A-206ENST00000431893 PTMAP06454 111 aaKnown RBP15.18■□□□□ 0.02
SEC16A-206ENST00000431893 MYH16Q9H6N6 1097 aa15.17■□□□□ 0.02
SEC16A-206ENST00000431893 ABCC9O60706 1549 aa15.13■□□□□ 0.01
SEC16A-206ENST00000431893 CSRNP3Q8WYN3 585 aa15.12■□□□□ 0.01
SEC16A-206ENST00000431893 BECN1Q14457 450 aa15.12■□□□□ 0.01
SEC16A-206ENST00000431893 DDRGK1Q96HY6 314 aa15.11■□□□□ 0.01
SEC16A-206ENST00000431893 ANP32EQ9BTT0 268 aa15.11■□□□□ 0.01
SEC16A-206ENST00000431893 PLCB2Q00722 1185 aa15.1■□□□□ 0.01
SEC16A-206ENST00000431893 TNNT2P45379 298 aaPredicted RBP15.1■□□□□ 0.01
SEC16A-206ENST00000431893 ARID4BQ4LE39 1312 aaPredicted RBP15.09■□□□□ 0.01
SEC16A-206ENST00000431893 C14orf37Q86TY3 774 aa15.09■□□□□ 0.01
SEC16A-206ENST00000431893 SUPT16HQ9Y5B9 1047 aaKnown RBP15.06■□□□□ 0
SEC16A-206ENST00000431893 GOLGA6L22H0YM25 854 aa15.05■□□□□ -0
SEC16A-206ENST00000431893 ZRSR1Q15695 479 aaKnown RBP15.01□□□□□ -0.01
SEC16A-206ENST00000431893 RGS3P49796 1198 aa15□□□□□ -0.01
SEC16A-206ENST00000431893 ARID3AQ99856 593 aa15□□□□□ -0.01
SEC16A-206ENST00000431893 SPRYD3Q8NCJ5 442 aa14.99□□□□□ -0.01
SEC16A-206ENST00000431893 NEUROD2Q15784 382 aa14.99□□□□□ -0.01
SEC16A-206ENST00000431893 PPM1GO15355 546 aaPredicted RBP14.98□□□□□ -0.01
SEC16A-206ENST00000431893 RRP7BPQ9NSQ0 103 aa14.96□□□□□ -0.01
SEC16A-206ENST00000431893 NCBP3Q53F19 620 aaKnown RBP14.96□□□□□ -0.02
SEC16A-206ENST00000431893 FTSJ3Q8IY81 847 aaKnown RBP14.94□□□□□ -0.02
SEC16A-206ENST00000431893 NOP58Q9Y2X3 529 aaKnown RBP14.94□□□□□ -0.02
SEC16A-206ENST00000431893 RGL3Q3MIN7 710 aa14.93□□□□□ -0.02
SEC16A-206ENST00000431893 ERICH6BQ5W0A0 696 aa14.92□□□□□ -0.02
SEC16A-206ENST00000431893 CASC1Q6TDU7 716 aa14.92□□□□□ -0.02
SEC16A-206ENST00000431893 NAP1L2Q9ULW6 460 aaPredicted RBP14.91□□□□□ -0.02
SEC16A-206ENST00000431893 FRAT1Q92837 279 aaPredicted RBP14.91□□□□□ -0.02
SEC16A-206ENST00000431893 EIF4G2P78344 907 aaKnown RBP eCLIP14.91□□□□□ -0.02
SEC16A-206ENST00000431893 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.91□□□□□ -0.02
SEC16A-206ENST00000431893 HSP90AB1P08238 724 aaKnown RBP14.91□□□□□ -0.02
SEC16A-206ENST00000431893 B4GALNT3Q6L9W6 998 aa14.89□□□□□ -0.03
SEC16A-206ENST00000431893 DEKP35659 375 aaKnown RBP14.87□□□□□ -0.03
SEC16A-206ENST00000431893 DCAF1Q9Y4B6 1507 aa14.87□□□□□ -0.03
SEC16A-206ENST00000431893 NPM1P06748 294 aaKnown RBP eCLIP14.84□□□□□ -0.03
SEC16A-206ENST00000431893 PPP1R15AO75807 674 aaPredicted RBP14.83□□□□□ -0.04
SEC16A-206ENST00000431893 CC2D1BQ5T0F9 858 aaKnown RBP14.83□□□□□ -0.04
SEC16A-206ENST00000431893 TSPY4P0CV99 314 aa14.82□□□□□ -0.04
SEC16A-206ENST00000431893 TSPY10P0CW01 314 aa14.82□□□□□ -0.04
SEC16A-206ENST00000431893 HAP1P54257 671 aaPredicted RBP14.8□□□□□ -0.04
SEC16A-206ENST00000431893 MTUS2Q5JR59 1369 aa14.8□□□□□ -0.04
SEC16A-206ENST00000431893 CLSTN1O94985 981 aa14.8□□□□□ -0.04
SEC16A-206ENST00000431893 FGD1P98174 961 aa14.8□□□□□ -0.04
SEC16A-206ENST00000431893 OS9Q13438 667 aaPredicted RBP14.8□□□□□ -0.04
SEC16A-206ENST00000431893 DRC7Q8IY82 874 aa14.79□□□□□ -0.04
SEC16A-206ENST00000431893 PPP4R2Q9NY27 417 aa14.78□□□□□ -0.04
SEC16A-206ENST00000431893 GOLGA6L6A8MZA4 724 aa14.78□□□□□ -0.04
SEC16A-206ENST00000431893 KCNH8Q96L42 1107 aa14.78□□□□□ -0.04
SEC16A-206ENST00000431893 KNSTRNQ9Y448 316 aa14.78□□□□□ -0.04
SEC16A-206ENST00000431893 MSNP26038 577 aaKnown RBP14.77□□□□□ -0.04
SEC16A-206ENST00000431893 KCNJ4P48050 445 aa14.77□□□□□ -0.05
SEC16A-206ENST00000431893 CFAP53Q96M91 514 aa14.77□□□□□ -0.05
SEC16A-206ENST00000431893 GZF1Q9H116 711 aaPredicted RBP14.76□□□□□ -0.05
SEC16A-206ENST00000431893 LMOD2Q6P5Q4 547 aa14.75□□□□□ -0.05
SEC16A-206ENST00000431893 MAPK8IP3Q9UPT6 1336 aa14.74□□□□□ -0.05
SEC16A-206ENST00000431893 NPHP1O15259 732 aa14.73□□□□□ -0.05
SEC16A-206ENST00000431893 SCRIBQ14160 1630 aa14.73□□□□□ -0.05
SEC16A-206ENST00000431893 CHAF1AQ13111 956 aaPredicted RBP14.73□□□□□ -0.05
SEC16A-206ENST00000431893 HSCBQ8IWL3 235 aa14.73□□□□□ -0.05
SEC16A-206ENST00000431893 CARD11Q9BXL7 1154 aa14.73□□□□□ -0.05
SEC16A-206ENST00000431893 U2SURPO15042 1029 aaKnown RBP14.72□□□□□ -0.05
SEC16A-206ENST00000431893 SIN3AQ96ST3 1273 aa14.72□□□□□ -0.05
SEC16A-206ENST00000431893 APBB1O00213 710 aa14.71□□□□□ -0.05
SEC16A-206ENST00000431893 GOLGA6L4A6NEF3 574 aa14.71□□□□□ -0.05
SEC16A-206ENST00000431893 SOX12O15370 315 aa14.7□□□□□ -0.06
SEC16A-206ENST00000431893 MYO15BQ96JP2 1530 aa14.67□□□□□ -0.06
SEC16A-206ENST00000431893 PDE4CQ08493 712 aa14.67□□□□□ -0.06
SEC16A-206ENST00000431893 RBM19Q9Y4C8 960 aaKnown RBP14.67□□□□□ -0.06
SEC16A-206ENST00000431893 ISY1Q9ULR0 285 aaKnown RBP14.66□□□□□ -0.06
SEC16A-206ENST00000431893 L1TD1Q5T7N2 865 aaKnown RBP14.64□□□□□ -0.07
SEC16A-206ENST00000431893 SLKQ9H2G2 1235 aaPredicted RBP14.64□□□□□ -0.07
SEC16A-206ENST00000431893 GOLGA2Q08379 1002 aa14.64□□□□□ -0.07
SEC16A-206ENST00000431893 CLIP1P30622 1438 aa14.63□□□□□ -0.07
SEC16A-206ENST00000431893 NRDCO43847 1150 aa14.63□□□□□ -0.07
SEC16A-206ENST00000431893 ANO8Q9HCE9 1232 aaPredicted RBP14.62□□□□□ -0.07
SEC16A-206ENST00000431893 ZCCHC6Q5VYS8 1495 aaKnown RBP14.61□□□□□ -0.07
SEC16A-206ENST00000431893 FOXD4L1Q9NU39 408 aa14.6□□□□□ -0.07
SEC16A-206ENST00000431893 CHMP7Q8WUX9 453 aaPredicted RBP14.6□□□□□ -0.07
SEC16A-206ENST00000431893 POGKQ9P215 609 aa14.6□□□□□ -0.07
SEC16A-206ENST00000431893 GNL2Q13823 731 aaKnown RBP14.59□□□□□ -0.07
SEC16A-206ENST00000431893 NUDCQ9Y266 331 aa14.59□□□□□ -0.07
SEC16A-206ENST00000431893 SAFB2Q14151 953 aaKnown RBP eCLIP14.57□□□□□ -0.08
SEC16A-206ENST00000431893 NOC3LQ8WTT2 800 aaKnown RBP14.57□□□□□ -0.08
SEC16A-206ENST00000431893 PNNQ9H307 717 aaKnown RBP14.57□□□□□ -0.08
SEC16A-206ENST00000431893 TNNT3P45378 269 aaPredicted RBP14.55□□□□□ -0.08
SEC16A-206ENST00000431893 NOL8Q76FK4 1167 aaKnown RBP14.55□□□□□ -0.08
SEC16A-206ENST00000431893 MCCP23508 829 aa14.55□□□□□ -0.08
SEC16A-206ENST00000431893 CDCA8Q53HL2 280 aa14.55□□□□□ -0.08
SEC16A-206ENST00000431893 HSP90B1P14625 803 aaKnown RBP14.53□□□□□ -0.08
SEC16A-206ENST00000431893 FOXD4L5Q5VV16 416 aaPredicted RBP14.52□□□□□ -0.08
SEC16A-206ENST00000431893 FOXD4L4Q8WXT5 416 aaPredicted RBP14.52□□□□□ -0.08
SEC16A-206ENST00000431893 CEP162Q5TB80 1403 aa14.51□□□□□ -0.09
SEC16A-206ENST00000431893 CREBRFQ8IUR6 639 aa14.51□□□□□ -0.09
SEC16A-206ENST00000431893 MFAP1P55081 439 aaKnown RBP14.51□□□□□ -0.09
SEC16A-206ENST00000431893 KIAA2012Q0VF49 1180 aa14.5□□□□□ -0.09
SEC16A-206ENST00000431893 PRM3Q9NNZ6 103 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms