RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 ESF1Q9H501 851 aaKnown RBP15.49■□□□□ 0.07
RIMKLA-202ENST00000431473 NCLP19338 710 aaKnown RBP15.49■□□□□ 0.07
RIMKLA-202ENST00000431473 SUPT16HQ9Y5B9 1047 aaKnown RBP15.47■□□□□ 0.07
RIMKLA-202ENST00000431473 SENP3Q9H4L4 574 aaPredicted RBP15.47■□□□□ 0.07
RIMKLA-202ENST00000431473 LAS1LQ9Y4W2 734 aaKnown RBP15.47■□□□□ 0.07
RIMKLA-202ENST00000431473 MYO15BQ96JP2 1530 aa15.46■□□□□ 0.07
RIMKLA-202ENST00000431473 TNNT2P45379 298 aaPredicted RBP15.46■□□□□ 0.06
RIMKLA-202ENST00000431473 DNTTIP2Q5QJE6 756 aaKnown RBP15.46■□□□□ 0.06
RIMKLA-202ENST00000431473 NAP1L5Q96NT1 182 aaPredicted RBP15.46■□□□□ 0.06
RIMKLA-202ENST00000431473 CDK11BP21127 795 aaKnown RBP15.44■□□□□ 0.06
RIMKLA-202ENST00000431473 PTMAP06454 111 aaKnown RBP15.44■□□□□ 0.06
RIMKLA-202ENST00000431473 GOLGA6L22H0YM25 854 aa15.43■□□□□ 0.06
RIMKLA-202ENST00000431473 EIF4G2P78344 907 aaKnown RBP eCLIP15.4■□□□□ 0.06
RIMKLA-202ENST00000431473 PLEKHG5O94827 1062 aa15.37■□□□□ 0.05
RIMKLA-202ENST00000431473 NOP58Q9Y2X3 529 aaKnown RBP15.36■□□□□ 0.05
RIMKLA-202ENST00000431473 MTUS2Q5JR59 1369 aa15.35■□□□□ 0.05
RIMKLA-202ENST00000431473 RRP7BPQ9NSQ0 103 aa15.35■□□□□ 0.05
RIMKLA-202ENST00000431473 ERICH6BQ5W0A0 696 aa15.34■□□□□ 0.05
RIMKLA-202ENST00000431473 A0A0G2JS52 829 aa15.34■□□□□ 0.05
RIMKLA-202ENST00000431473 FTSJ3Q8IY81 847 aaKnown RBP15.33■□□□□ 0.04
RIMKLA-202ENST00000431473 ZBTB7CA1YPR0 619 aa15.33■□□□□ 0.04
RIMKLA-202ENST00000431473 ZRSR1Q15695 479 aaKnown RBP15.32■□□□□ 0.04
RIMKLA-202ENST00000431473 CLIP1P30622 1438 aa15.31■□□□□ 0.04
RIMKLA-202ENST00000431473 CASC1Q6TDU7 716 aa15.31■□□□□ 0.04
RIMKLA-202ENST00000431473 PPM1GO15355 546 aaPredicted RBP15.3■□□□□ 0.04
RIMKLA-202ENST00000431473 RGS3P49796 1198 aa15.3■□□□□ 0.04
RIMKLA-202ENST00000431473 PLCB2Q00722 1185 aa15.29■□□□□ 0.04
RIMKLA-202ENST00000431473 TAOK2Q9UL54 1235 aa15.27■□□□□ 0.03
RIMKLA-202ENST00000431473 B4GALNT3Q6L9W6 998 aa15.27■□□□□ 0.03
RIMKLA-202ENST00000431473 TULP1O00294 542 aaPredicted RBP15.26■□□□□ 0.03
RIMKLA-202ENST00000431473 C14orf37Q86TY3 774 aa15.26■□□□□ 0.03
RIMKLA-202ENST00000431473 TSPY4P0CV99 314 aa15.26■□□□□ 0.03
RIMKLA-202ENST00000431473 TSPY10P0CW01 314 aa15.26■□□□□ 0.03
RIMKLA-202ENST00000431473 AMER1Q5JTC6 1135 aaPredicted RBP15.25■□□□□ 0.03
RIMKLA-202ENST00000431473 DEKP35659 375 aaKnown RBP15.24■□□□□ 0.03
RIMKLA-202ENST00000431473 ARID4BQ4LE39 1312 aaPredicted RBP15.24■□□□□ 0.03
RIMKLA-202ENST00000431473 NEUROD2Q15784 382 aa15.24■□□□□ 0.03
RIMKLA-202ENST00000431473 PPP4R2Q9NY27 417 aa15.24■□□□□ 0.03
RIMKLA-202ENST00000431473 RGL3Q3MIN7 710 aa15.24■□□□□ 0.03
RIMKLA-202ENST00000431473 ZCCHC6Q5VYS8 1495 aaKnown RBP15.23■□□□□ 0.03
RIMKLA-202ENST00000431473 HSP90AB1P08238 724 aaKnown RBP15.23■□□□□ 0.03
RIMKLA-202ENST00000431473 KNSTRNQ9Y448 316 aa15.22■□□□□ 0.03
RIMKLA-202ENST00000431473 CEP162Q5TB80 1403 aa15.22■□□□□ 0.03
RIMKLA-202ENST00000431473 SPRYD3Q8NCJ5 442 aa15.21■□□□□ 0.03
RIMKLA-202ENST00000431473 FRAT1Q92837 279 aaPredicted RBP15.21■□□□□ 0.02
RIMKLA-202ENST00000431473 NPM1P06748 294 aaKnown RBP eCLIP15.17■□□□□ 0.02
RIMKLA-202ENST00000431473 GOLGA3Q08378 1498 aa15.16■□□□□ 0.02
RIMKLA-202ENST00000431473 CC2D1BQ5T0F9 858 aaKnown RBP15.15■□□□□ 0.02
RIMKLA-202ENST00000431473 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.15■□□□□ 0.02
RIMKLA-202ENST00000431473 CFAP53Q96M91 514 aa15.15■□□□□ 0.02
RIMKLA-202ENST00000431473 MSNP26038 577 aaKnown RBP15.14■□□□□ 0.01
RIMKLA-202ENST00000431473 CARD11Q9BXL7 1154 aa15.14■□□□□ 0.01
RIMKLA-202ENST00000431473 RBM19Q9Y4C8 960 aaKnown RBP15.13■□□□□ 0.01
RIMKLA-202ENST00000431473 ARID3AQ99856 593 aa15.12■□□□□ 0.01
RIMKLA-202ENST00000431473 GOLGA6L6A8MZA4 724 aa15.12■□□□□ 0.01
RIMKLA-202ENST00000431473 PPP1R15AO75807 674 aaPredicted RBP15.11■□□□□ 0.01
RIMKLA-202ENST00000431473 CHAF1AQ13111 956 aaPredicted RBP15.11■□□□□ 0.01
RIMKLA-202ENST00000431473 SIN3AQ96ST3 1273 aa15.11■□□□□ 0.01
RIMKLA-202ENST00000431473 HSCBQ8IWL3 235 aa15.1■□□□□ 0.01
RIMKLA-202ENST00000431473 NAP1L2Q9ULW6 460 aaPredicted RBP15.1■□□□□ 0.01
RIMKLA-202ENST00000431473 MAPK8IP3Q9UPT6 1336 aa15.09■□□□□ 0.01
RIMKLA-202ENST00000431473 RSF1Q96T23 1441 aaPredicted RBP15.09■□□□□ 0.01
RIMKLA-202ENST00000431473 FGD1P98174 961 aa15.07■□□□□ 0
RIMKLA-202ENST00000431473 DRC7Q8IY82 874 aa15.07■□□□□ 0
RIMKLA-202ENST00000431473 KCNH8Q96L42 1107 aa15.07■□□□□ 0
RIMKLA-202ENST00000431473 L1TD1Q5T7N2 865 aaKnown RBP15.06■□□□□ 0
RIMKLA-202ENST00000431473 OS9Q13438 667 aaPredicted RBP15.06■□□□□ 0
RIMKLA-202ENST00000431473 CDCA8Q53HL2 280 aa15.06■□□□□ 0
RIMKLA-202ENST00000431473 KCNJ4P48050 445 aa15.05■□□□□ 0
RIMKLA-202ENST00000431473 CHMP7Q8WUX9 453 aaPredicted RBP15.05■□□□□ -0
RIMKLA-202ENST00000431473 GZF1Q9H116 711 aaPredicted RBP15.05■□□□□ -0
RIMKLA-202ENST00000431473 GOLGA6L4A6NEF3 574 aa15.02□□□□□ -0.01
RIMKLA-202ENST00000431473 U2SURPO15042 1029 aaKnown RBP15.01□□□□□ -0.01
RIMKLA-202ENST00000431473 NRDCO43847 1150 aa15□□□□□ -0.01
RIMKLA-202ENST00000431473 NUDCQ9Y266 331 aa14.97□□□□□ -0.01
RIMKLA-202ENST00000431473 HAP1P54257 671 aaPredicted RBP14.96□□□□□ -0.01
RIMKLA-202ENST00000431473 SLKQ9H2G2 1235 aaPredicted RBP14.96□□□□□ -0.02
RIMKLA-202ENST00000431473 CFDP1Q9UEE9 299 aaPredicted RBP14.96□□□□□ -0.02
RIMKLA-202ENST00000431473 CHMP4BQ9H444 224 aaKnown RBP14.94□□□□□ -0.02
RIMKLA-202ENST00000431473 MS4A1P11836 297 aa14.94□□□□□ -0.02
RIMKLA-202ENST00000431473 CEP164Q9UPV0 1460 aa14.93□□□□□ -0.02
RIMKLA-202ENST00000431473 PLEKHD1A6NEE1 506 aa14.93□□□□□ -0.02
RIMKLA-202ENST00000431473 MCCP23508 829 aa14.93□□□□□ -0.02
RIMKLA-202ENST00000431473 EEA1Q15075 1411 aa14.92□□□□□ -0.02
RIMKLA-202ENST00000431473 POGKQ9P215 609 aa14.92□□□□□ -0.02
RIMKLA-202ENST00000431473 APBB1O00213 710 aa14.92□□□□□ -0.02
RIMKLA-202ENST00000431473 NPHP1O15259 732 aa14.91□□□□□ -0.02
RIMKLA-202ENST00000431473 LMOD2Q6P5Q4 547 aa14.91□□□□□ -0.02
RIMKLA-202ENST00000431473 DCAF11Q8TEB1 546 aa14.91□□□□□ -0.02
RIMKLA-202ENST00000431473 GOLGA2Q08379 1002 aa14.9□□□□□ -0.02
RIMKLA-202ENST00000431473 NCBP3Q53F19 620 aaKnown RBP14.88□□□□□ -0.03
RIMKLA-202ENST00000431473 CCNB3Q8WWL7 1395 aa14.88□□□□□ -0.03
RIMKLA-202ENST00000431473 CLSTN1O94985 981 aa14.88□□□□□ -0.03
RIMKLA-202ENST00000431473 GBP4Q96PP9 640 aa14.88□□□□□ -0.03
RIMKLA-202ENST00000431473 TNIKQ9UKE5 1360 aa14.87□□□□□ -0.03
RIMKLA-202ENST00000431473 PNNQ9H307 717 aaKnown RBP14.87□□□□□ -0.03
RIMKLA-202ENST00000431473 SOX12O15370 315 aa14.87□□□□□ -0.03
RIMKLA-202ENST00000431473 GNL2Q13823 731 aaKnown RBP14.87□□□□□ -0.03
RIMKLA-202ENST00000431473 KIAA2012Q0VF49 1180 aa14.87□□□□□ -0.03
RIMKLA-202ENST00000431473 WRNQ14191 1432 aaPredicted RBP eCLIP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms