RNA–Protein interactions for RNA: ENST00000429433.3

BEND3-202, Transcript of BEN domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEND3, Length 6,654 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEND3-202ENST00000429433 PLEKHG5O94827 1062 aa13.89□□□□□ -0.19
BEND3-202ENST00000429433 TPRNQ4KMQ1 711 aa13.88□□□□□ -0.19
BEND3-202ENST00000429433 MYH16Q9H6N6 1097 aa13.88□□□□□ -0.19
BEND3-202ENST00000429433 SUPT16HQ9Y5B9 1047 aaKnown RBP13.88□□□□□ -0.19
BEND3-202ENST00000429433 CHGAP10645 457 aaKnown RBP13.88□□□□□ -0.19
BEND3-202ENST00000429433 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.86□□□□□ -0.199e-8■■□□□ 14
BEND3-202ENST00000429433 LAS1LQ9Y4W2 734 aaKnown RBP13.83□□□□□ -0.2
BEND3-202ENST00000429433 CDK11BP21127 795 aaKnown RBP13.82□□□□□ -0.2
BEND3-202ENST00000429433 EIF4G2P78344 907 aaKnown RBP eCLIP13.81□□□□□ -0.2
BEND3-202ENST00000429433 RRP7BPQ9NSQ0 103 aa13.79□□□□□ -0.2
BEND3-202ENST00000429433 SIN3AQ96ST3 1273 aa13.77□□□□□ -0.21
BEND3-202ENST00000429433 SCRIBQ14160 1630 aa13.76□□□□□ -0.21
BEND3-202ENST00000429433 ESF1Q9H501 851 aaKnown RBP13.76□□□□□ -0.21
BEND3-202ENST00000429433 B4GALNT3Q6L9W6 998 aa13.75□□□□□ -0.21
BEND3-202ENST00000429433 PTMAP06454 111 aaKnown RBP13.75□□□□□ -0.21
BEND3-202ENST00000429433 PPP4R2Q9NY27 417 aa13.74□□□□□ -0.21
BEND3-202ENST00000429433 STAG3Q9UJ98 1225 aa13.73□□□□□ -0.21
BEND3-202ENST00000429433 ARID4BQ4LE39 1312 aaPredicted RBP13.71□□□□□ -0.22
BEND3-202ENST00000429433 TSPY4P0CV99 314 aa13.71□□□□□ -0.22
BEND3-202ENST00000429433 TSPY10P0CW01 314 aa13.71□□□□□ -0.22
BEND3-202ENST00000429433 ZRSR1Q15695 479 aaKnown RBP13.71□□□□□ -0.22
BEND3-202ENST00000429433 NOP58Q9Y2X3 529 aaKnown RBP13.71□□□□□ -0.22
BEND3-202ENST00000429433 CASC1Q6TDU7 716 aa13.7□□□□□ -0.22
BEND3-202ENST00000429433 DNTTIP2Q5QJE6 756 aaKnown RBP13.69□□□□□ -0.22
BEND3-202ENST00000429433 NAP1L5Q96NT1 182 aaPredicted RBP13.69□□□□□ -0.22
BEND3-202ENST00000429433 RGL3Q3MIN7 710 aa13.68□□□□□ -0.22
BEND3-202ENST00000429433 CDCA8Q53HL2 280 aa13.68□□□□□ -0.22
BEND3-202ENST00000429433 AMER1Q5JTC6 1135 aaPredicted RBP13.67□□□□□ -0.22
BEND3-202ENST00000429433 CHMP4BQ9H444 224 aaKnown RBP13.67□□□□□ -0.22
BEND3-202ENST00000429433 EEA1Q15075 1411 aa13.67□□□□□ -0.22
BEND3-202ENST00000429433 MTUS2Q5JR59 1369 aa13.67□□□□□ -0.22
BEND3-202ENST00000429433 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.67□□□□□ -0.22
BEND3-202ENST00000429433 L1TD1Q5T7N2 865 aaKnown RBP13.65□□□□□ -0.22
BEND3-202ENST00000429433 CFAP53Q96M91 514 aa13.65□□□□□ -0.22
BEND3-202ENST00000429433 NEUROD2Q15784 382 aa13.65□□□□□ -0.22
BEND3-202ENST00000429433 ZBTB7CA1YPR0 619 aa13.65□□□□□ -0.22
BEND3-202ENST00000429433 CLIP1P30622 1438 aa13.64□□□□□ -0.23
BEND3-202ENST00000429433 NRDCO43847 1150 aa13.64□□□□□ -0.23
BEND3-202ENST00000429433 SPRYD3Q8NCJ5 442 aa13.64□□□□□ -0.23
BEND3-202ENST00000429433 GOLGA6L6A8MZA4 724 aa13.63□□□□□ -0.23
BEND3-202ENST00000429433 MS4A1P11836 297 aa13.63□□□□□ -0.23
BEND3-202ENST00000429433 RGS3P49796 1198 aa13.62□□□□□ -0.23
BEND3-202ENST00000429433 TAOK2Q9UL54 1235 aa13.62□□□□□ -0.23
BEND3-202ENST00000429433 RSF1Q96T23 1441 aaPredicted RBP13.61□□□□□ -0.23
BEND3-202ENST00000429433 ZCCHC6Q5VYS8 1495 aaKnown RBP13.61□□□□□ -0.23
BEND3-202ENST00000429433 KCNH8Q96L42 1107 aa13.6□□□□□ -0.23
BEND3-202ENST00000429433 CCDC180Q9P1Z9 1646 aa13.6□□□□□ -0.23
BEND3-202ENST00000429433 NPM1P06748 294 aaKnown RBP eCLIP13.58□□□□□ -0.24
BEND3-202ENST00000429433 CHAF1AQ13111 956 aaPredicted RBP13.58□□□□□ -0.24
BEND3-202ENST00000429433 CFAP44Q96MT7 982 aa13.58□□□□□ -0.24
BEND3-202ENST00000429433 FTSJ3Q8IY81 847 aaKnown RBP13.57□□□□□ -0.24
BEND3-202ENST00000429433 RBM19Q9Y4C8 960 aaKnown RBP13.57□□□□□ -0.24
BEND3-202ENST00000429433 ARID3AQ99856 593 aa13.56□□□□□ -0.24
BEND3-202ENST00000429433 KNSTRNQ9Y448 316 aa13.56□□□□□ -0.24
BEND3-202ENST00000429433 TIMELESSQ9UNS1 1208 aa13.55□□□□□ -0.24
BEND3-202ENST00000429433 DEKP35659 375 aaKnown RBP13.55□□□□□ -0.24
BEND3-202ENST00000429433 PTMSP20962 102 aa13.55□□□□□ -0.24
BEND3-202ENST00000429433 GOLGA3Q08378 1498 aa13.54□□□□□ -0.24
BEND3-202ENST00000429433 CC2D1BQ5T0F9 858 aaKnown RBP13.53□□□□□ -0.24
BEND3-202ENST00000429433 MSNP26038 577 aaKnown RBP13.52□□□□□ -0.24
BEND3-202ENST00000429433 CCER2I3L3R5 266 aa13.52□□□□□ -0.24
BEND3-202ENST00000429433 HSP90AB1P08238 724 aaKnown RBP13.52□□□□□ -0.25
BEND3-202ENST00000429433 FOXD1Q16676 465 aa13.52□□□□□ -0.25
BEND3-202ENST00000429433 CEP162Q5TB80 1403 aa13.51□□□□□ -0.25
BEND3-202ENST00000429433 NUDCQ9Y266 331 aa13.5□□□□□ -0.25
BEND3-202ENST00000429433 HSCBQ8IWL3 235 aa13.5□□□□□ -0.25
BEND3-202ENST00000429433 A0A0G2JS52 829 aa13.49□□□□□ -0.25
BEND3-202ENST00000429433 FRAT1Q92837 279 aaPredicted RBP13.49□□□□□ -0.25
BEND3-202ENST00000429433 MAPK8IP3Q9UPT6 1336 aa13.48□□□□□ -0.25
BEND3-202ENST00000429433 PNNQ9H307 717 aaKnown RBP13.47□□□□□ -0.25
BEND3-202ENST00000429433 TSHZ2Q9NRE2 1034 aa13.46□□□□□ -0.25
BEND3-202ENST00000429433 CARD11Q9BXL7 1154 aa13.45□□□□□ -0.26
BEND3-202ENST00000429433 TNIKQ9UKE5 1360 aa13.45□□□□□ -0.26
BEND3-202ENST00000429433 PLCB2Q00722 1185 aa13.45□□□□□ -0.26
BEND3-202ENST00000429433 GOLGA6L4A6NEF3 574 aa13.44□□□□□ -0.26
BEND3-202ENST00000429433 BAZ1BQ9UIG0 1483 aaKnown RBP13.43□□□□□ -0.26
BEND3-202ENST00000429433 MCCP23508 829 aa13.42□□□□□ -0.26
BEND3-202ENST00000429433 HAP1P54257 671 aaPredicted RBP13.42□□□□□ -0.26
BEND3-202ENST00000429433 GZF1Q9H116 711 aaPredicted RBP13.41□□□□□ -0.26
BEND3-202ENST00000429433 GBP4Q96PP9 640 aa13.41□□□□□ -0.26
BEND3-202ENST00000429433 C14orf37Q86TY3 774 aa13.41□□□□□ -0.26
BEND3-202ENST00000429433 TULP1O00294 542 aaPredicted RBP13.39□□□□□ -0.27
BEND3-202ENST00000429433 TCERG1O14776 1098 aaKnown RBP13.39□□□□□ -0.27
BEND3-202ENST00000429433 KIAA2012Q0VF49 1180 aa13.39□□□□□ -0.27
BEND3-202ENST00000429433 PLEKHD1A6NEE1 506 aa13.38□□□□□ -0.27
BEND3-202ENST00000429433 CEP164Q9UPV0 1460 aa13.38□□□□□ -0.27
BEND3-202ENST00000429433 FGD1P98174 961 aa13.37□□□□□ -0.27
BEND3-202ENST00000429433 PPP1R15AO75807 674 aaPredicted RBP13.37□□□□□ -0.27
BEND3-202ENST00000429433 KCNJ4P48050 445 aa13.35□□□□□ -0.27
BEND3-202ENST00000429433 SOX12O15370 315 aa13.35□□□□□ -0.27
BEND3-202ENST00000429433 SLC4A3P48751 1232 aa13.35□□□□□ -0.27
BEND3-202ENST00000429433 KANK4Q5T7N3 995 aaPredicted RBP13.35□□□□□ -0.27
BEND3-202ENST00000429433 SYAP1Q96A49 352 aaPredicted RBP13.35□□□□□ -0.27
BEND3-202ENST00000429433 SLKQ9H2G2 1235 aaPredicted RBP13.33□□□□□ -0.28
BEND3-202ENST00000429433 APBB1O00213 710 aa13.33□□□□□ -0.28
BEND3-202ENST00000429433 TMF1P82094 1093 aa13.33□□□□□ -0.28
BEND3-202ENST00000429433 SAFB2Q14151 953 aaKnown RBP eCLIP13.33□□□□□ -0.28
BEND3-202ENST00000429433 HTATSF1O43719 755 aaKnown RBP13.32□□□□□ -0.28
BEND3-202ENST00000429433 CFDP1Q9UEE9 299 aaPredicted RBP13.32□□□□□ -0.28
BEND3-202ENST00000429433 DRC7Q8IY82 874 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms