RNA–Protein interactions for RNA: ENST00000428457.1

TNS3-204, Transcript of tensin 3, humanhuman

TSL 1 (best)

Gene TNS3, Length 5,070 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNS3-204ENST00000428457 SLC24A1O60721 1099 aa13.47□□□□□ -0.25
TNS3-204ENST00000428457 SUPT16HQ9Y5B9 1047 aaKnown RBP13.47□□□□□ -0.25
TNS3-204ENST00000428457 ARID4BQ4LE39 1312 aaPredicted RBP13.46□□□□□ -0.25
TNS3-204ENST00000428457 KIF27Q86VH2 1401 aa13.45□□□□□ -0.26
TNS3-204ENST00000428457 TRHP20396 242 aaPredicted RBP13.44□□□□□ -0.26
TNS3-204ENST00000428457 KCNH8Q96L42 1107 aa13.43□□□□□ -0.26
TNS3-204ENST00000428457 SMARCA2P51531 1590 aa13.43□□□□□ -0.26
TNS3-204ENST00000428457 ANP32BQ92688 251 aaKnown RBP13.41□□□□□ -0.26
TNS3-204ENST00000428457 MRS2Q9HD23 443 aa13.41□□□□□ -0.26
TNS3-204ENST00000428457 PPP1R15AO75807 674 aaPredicted RBP13.41□□□□□ -0.26
TNS3-204ENST00000428457 WRNQ14191 1432 aaPredicted RBP eCLIP13.4□□□□□ -0.26
TNS3-204ENST00000428457 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.4□□□□□ -0.27
TNS3-204ENST00000428457 CECR2Q9BXF3 1484 aa13.39□□□□□ -0.27
TNS3-204ENST00000428457 HSP90AA1P07900 732 aaKnown RBP13.39□□□□□ -0.27
TNS3-204ENST00000428457 SENP3-EIF4A1A0A087X0R7 540 aa13.36□□□□□ -0.27
TNS3-204ENST00000428457 UPF2Q9HAU5 1272 aaKnown RBP13.36□□□□□ -0.27
TNS3-204ENST00000428457 C14orf37Q86TY3 774 aa13.34□□□□□ -0.27
TNS3-204ENST00000428457 TMC1Q8TDI8 760 aa13.34□□□□□ -0.27
TNS3-204ENST00000428457 LAS1LQ9Y4W2 734 aaKnown RBP13.32□□□□□ -0.28
TNS3-204ENST00000428457 DEKP35659 375 aaKnown RBP13.3□□□□□ -0.28
TNS3-204ENST00000428457 GOLGA3Q08378 1498 aa13.29□□□□□ -0.28
TNS3-204ENST00000428457 RBM19Q9Y4C8 960 aaKnown RBP13.29□□□□□ -0.28
TNS3-204ENST00000428457 CARMIL2Q6F5E8 1435 aa13.29□□□□□ -0.28
TNS3-204ENST00000428457 CLIP1P30622 1438 aa13.28□□□□□ -0.28
TNS3-204ENST00000428457 NOP58Q9Y2X3 529 aaKnown RBP13.28□□□□□ -0.28
TNS3-204ENST00000428457 HDGFP51858 240 aaKnown RBP13.27□□□□□ -0.28
TNS3-204ENST00000428457 CFDP1Q9UEE9 299 aaPredicted RBP13.27□□□□□ -0.29
TNS3-204ENST00000428457 CHIC2Q9UKJ5 165 aa13.26□□□□□ -0.29
TNS3-204ENST00000428457 CEP164Q9UPV0 1460 aa13.26□□□□□ -0.29
TNS3-204ENST00000428457 HAP1P54257 671 aaPredicted RBP13.24□□□□□ -0.29
TNS3-204ENST00000428457 TSHZ2Q9NRE2 1034 aa13.23□□□□□ -0.29
TNS3-204ENST00000428457 B4GALNT3Q6L9W6 998 aa13.22□□□□□ -0.29
TNS3-204ENST00000428457 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.22□□□□□ -0.29
TNS3-204ENST00000428457 DDRGK1Q96HY6 314 aa13.22□□□□□ -0.29
TNS3-204ENST00000428457 PPP4R2Q9NY27 417 aa13.2□□□□□ -0.3
TNS3-204ENST00000428457 MROH2BQ7Z745 1585 aa13.2□□□□□ -0.3
TNS3-204ENST00000428457 CEP162Q5TB80 1403 aa13.19□□□□□ -0.3
TNS3-204ENST00000428457 KANK1Q14678 1352 aa13.19□□□□□ -0.3
TNS3-204ENST00000428457 CUX2O14529 1486 aa13.19□□□□□ -0.3
TNS3-204ENST00000428457 PPM1GO15355 546 aaPredicted RBP13.18□□□□□ -0.3
TNS3-204ENST00000428457 NAP1L5Q96NT1 182 aaPredicted RBP13.18□□□□□ -0.3
TNS3-204ENST00000428457 TRIM44Q96DX7 344 aaPredicted RBP13.18□□□□□ -0.3
TNS3-204ENST00000428457 ERICH6BQ5W0A0 696 aa13.17□□□□□ -0.3
TNS3-204ENST00000428457 EIF4G1Q04637 1599 aaKnown RBP13.17□□□□□ -0.3
TNS3-204ENST00000428457 FHAD1B1AJZ9 1412 aa13.17□□□□□ -0.3
TNS3-204ENST00000428457 CARMIL1Q5VZK9 1371 aa13.17□□□□□ -0.3
TNS3-204ENST00000428457 EIF4G2P78344 907 aaKnown RBP eCLIP13.17□□□□□ -0.3
TNS3-204ENST00000428457 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.16□□□□□ -0.3
TNS3-204ENST00000428457 CADPSQ9ULU8 1353 aa13.16□□□□□ -0.3
TNS3-204ENST00000428457 SOGA1O94964 1423 aa13.15□□□□□ -0.3
TNS3-204ENST00000428457 CCNB3Q8WWL7 1395 aa13.14□□□□□ -0.31
TNS3-204ENST00000428457 WDR43Q15061 677 aaKnown RBP eCLIP13.14□□□□□ -0.317e-6■■□□□ 14.2
TNS3-204ENST00000428457 CDCA8Q53HL2 280 aa13.14□□□□□ -0.31
TNS3-204ENST00000428457 BECN1Q14457 450 aa13.13□□□□□ -0.31
TNS3-204ENST00000428457 ABCC8Q09428 1581 aa13.13□□□□□ -0.31
TNS3-204ENST00000428457 KDM2AQ9Y2K7 1162 aa13.13□□□□□ -0.31
TNS3-204ENST00000428457 A0A0G2JS52 829 aa13.11□□□□□ -0.31
TNS3-204ENST00000428457 SIN3AQ96ST3 1273 aa13.11□□□□□ -0.31
TNS3-204ENST00000428457 TNIKQ9UKE5 1360 aa13.11□□□□□ -0.31
TNS3-204ENST00000428457 CCDC88BA6NC98 1476 aa13.1□□□□□ -0.31
TNS3-204ENST00000428457 OSCARQ8IYS5 282 aa13.08□□□□□ -0.32
TNS3-204ENST00000428457 RRP7BPQ9NSQ0 103 aa13.07□□□□□ -0.32
TNS3-204ENST00000428457 RGS3P49796 1198 aa13.07□□□□□ -0.32
TNS3-204ENST00000428457 ZBTB7CA1YPR0 619 aa13.06□□□□□ -0.32
TNS3-204ENST00000428457 EFCAB2Q5VUJ9 269 aa13.05□□□□□ -0.32
TNS3-204ENST00000428457 NCLP19338 710 aaKnown RBP13.04□□□□□ -0.32
TNS3-204ENST00000428457 POGKQ9P215 609 aa13.04□□□□□ -0.32
TNS3-204ENST00000428457 MLECQ14165 292 aa13.02□□□□□ -0.33
TNS3-204ENST00000428457 TOP2AP11388 1531 aaKnown RBP13.01□□□□□ -0.33
TNS3-204ENST00000428457 CFAP53Q96M91 514 aa13.01□□□□□ -0.33
TNS3-204ENST00000428457 ATAD2BQ9ULI0 1458 aa13.01□□□□□ -0.33
TNS3-204ENST00000428457 WIZO95785 1651 aa13□□□□□ -0.33
TNS3-204ENST00000428457 TDRD9Q8NDG6 1382 aaKnown RBP13□□□□□ -0.33
TNS3-204ENST00000428457 TNNT2P45379 298 aaPredicted RBP13□□□□□ -0.33
TNS3-204ENST00000428457 GOLGA6L22H0YM25 854 aa12.99□□□□□ -0.33
TNS3-204ENST00000428457 AEBP2Q6ZN18 517 aaPredicted RBP12.99□□□□□ -0.33
TNS3-204ENST00000428457 PTMAP06454 111 aaKnown RBP12.98□□□□□ -0.33
TNS3-204ENST00000428457 DNTTIP2Q5QJE6 756 aaKnown RBP12.98□□□□□ -0.33
TNS3-204ENST00000428457 FMN1Q68DA7 1419 aa12.97□□□□□ -0.33
TNS3-204ENST00000428457 TPRNQ4KMQ1 711 aa12.97□□□□□ -0.33
TNS3-204ENST00000428457 RGL3Q3MIN7 710 aa12.95□□□□□ -0.34
TNS3-204ENST00000428457 LMOD2Q6P5Q4 547 aa12.95□□□□□ -0.34
TNS3-204ENST00000428457 CCER2I3L3R5 266 aa12.95□□□□□ -0.34
TNS3-204ENST00000428457 RSPH4AQ5TD94 716 aa12.95□□□□□ -0.34
TNS3-204ENST00000428457 FANCD2Q9BXW9 1451 aa12.95□□□□□ -0.34
TNS3-204ENST00000428457 PLEKHG5O94827 1062 aa12.92□□□□□ -0.34
TNS3-204ENST00000428457 EID1Q9Y6B2 187 aa12.92□□□□□ -0.34
TNS3-204ENST00000428457 SPRYD3Q8NCJ5 442 aa12.92□□□□□ -0.34
TNS3-204ENST00000428457 MYH16Q9H6N6 1097 aa12.92□□□□□ -0.34
TNS3-204ENST00000428457 GGT6Q6P531 493 aa12.91□□□□□ -0.34
TNS3-204ENST00000428457 JPH4Q96JJ6 628 aa12.91□□□□□ -0.34
TNS3-204ENST00000428457 SMARCA4P51532 1647 aa12.9□□□□□ -0.34
TNS3-204ENST00000428457 NUDCQ9Y266 331 aa12.89□□□□□ -0.35
TNS3-204ENST00000428457 UNC13AQ9UPW8 1703 aa12.89□□□□□ -0.35
TNS3-204ENST00000428457 NEUROD2Q15784 382 aa12.89□□□□□ -0.35
TNS3-204ENST00000428457 KNSTRNQ9Y448 316 aa12.89□□□□□ -0.35
TNS3-204ENST00000428457 FRAT1Q92837 279 aaPredicted RBP12.88□□□□□ -0.35
TNS3-204ENST00000428457 IPO9Q96P70 1041 aaKnown RBP12.88□□□□□ -0.35
TNS3-204ENST00000428457 AMER1Q5JTC6 1135 aaPredicted RBP12.88□□□□□ -0.35
TNS3-204ENST00000428457 CYB5RLQ6IPT4 315 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms