RNA–Protein interactions for RNA: ENST00000428210.5

XPO1-206, Transcript of exportin 1, humanhuman

TSL 2

Gene XPO1, Length 6,776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPO1-206ENST00000428210 HIRIP3Q9BW71 556 aaPredicted RBP18.13■□□□□ 0.49
XPO1-206ENST00000428210 CFDP1Q9UEE9 299 aaPredicted RBP18.13■□□□□ 0.49
XPO1-206ENST00000428210 CUX2O14529 1486 aa18.12■□□□□ 0.49
XPO1-206ENST00000428210 EIF5BO60841 1220 aaKnown RBP18.12■□□□□ 0.49
XPO1-206ENST00000428210 SALL2Q9Y467 1007 aaPredicted RBP18.12■□□□□ 0.49
XPO1-206ENST00000428210 FKBP8Q14318 412 aa18.12■□□□□ 0.49
XPO1-206ENST00000428210 TMC1Q8TDI8 760 aa18.12■□□□□ 0.49
XPO1-206ENST00000428210 SOGA1O94964 1423 aa18.12■□□□□ 0.49
XPO1-206ENST00000428210 SMARCA2P51531 1590 aa18.09■□□□□ 0.49
XPO1-206ENST00000428210 EIF4G1Q04637 1599 aaKnown RBP18.08■□□□□ 0.49
XPO1-206ENST00000428210 CARMIL1Q5VZK9 1371 aa18.08■□□□□ 0.48
XPO1-206ENST00000428210 EIF4G2P78344 907 aaKnown RBP eCLIP18.08■□□□□ 0.483e-10■■□□□ 11.6
XPO1-206ENST00000428210 MRS2Q9HD23 443 aa18.06■□□□□ 0.48
XPO1-206ENST00000428210 ABCC8Q09428 1581 aa18.05■□□□□ 0.48
XPO1-206ENST00000428210 WDR43Q15061 677 aaKnown RBP eCLIP18.05■□□□□ 0.48
XPO1-206ENST00000428210 SENP3Q9H4L4 574 aaPredicted RBP18.04■□□□□ 0.48
XPO1-206ENST00000428210 RGL3Q3MIN7 710 aa18.02■□□□□ 0.47
XPO1-206ENST00000428210 ANP32AP39687 249 aaKnown RBP18.02■□□□□ 0.47
XPO1-206ENST00000428210 MIER1Q8N108 512 aa18.01■□□□□ 0.47
XPO1-206ENST00000428210 FHAD1B1AJZ9 1412 aa18.01■□□□□ 0.47
XPO1-206ENST00000428210 NPM2Q86SE8 214 aaKnown RBP18■□□□□ 0.47
XPO1-206ENST00000428210 ANP32BQ92688 251 aaKnown RBP17.99■□□□□ 0.47
XPO1-206ENST00000428210 WIZO95785 1651 aa17.99■□□□□ 0.47
XPO1-206ENST00000428210 PPP1R15AO75807 674 aaPredicted RBP17.99■□□□□ 0.47
XPO1-206ENST00000428210 GLIPR1L2Q4G1C9 344 aa17.98■□□□□ 0.47
XPO1-206ENST00000428210 TOP2AP11388 1531 aaKnown RBP17.97■□□□□ 0.47
XPO1-206ENST00000428210 CCNB3Q8WWL7 1395 aa17.95■□□□□ 0.46
XPO1-206ENST00000428210 PDS5BQ9NTI5 1447 aa17.93■□□□□ 0.46
XPO1-206ENST00000428210 ARID4BQ4LE39 1312 aaPredicted RBP17.91■□□□□ 0.46
XPO1-206ENST00000428210 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.91■□□□□ 0.46
XPO1-206ENST00000428210 SIN3AQ96ST3 1273 aa17.89■□□□□ 0.45
XPO1-206ENST00000428210 SCAF1Q9H7N4 1312 aaKnown RBP17.89■□□□□ 0.45
XPO1-206ENST00000428210 CCDC136Q96JN2 1154 aa17.87■□□□□ 0.45
XPO1-206ENST00000428210 CARD11Q9BXL7 1154 aa17.87■□□□□ 0.45
XPO1-206ENST00000428210 VPS8Q8N3P4 1428 aa17.85■□□□□ 0.45
XPO1-206ENST00000428210 TDRD9Q8NDG6 1382 aaKnown RBP17.84■□□□□ 0.45
XPO1-206ENST00000428210 ZBTB7CA1YPR0 619 aa17.83■□□□□ 0.44
XPO1-206ENST00000428210 C14orf37Q86TY3 774 aa17.82■□□□□ 0.44
XPO1-206ENST00000428210 IRX6P78412 446 aaPredicted RBP17.82■□□□□ 0.44
XPO1-206ENST00000428210 UPF2Q9HAU5 1272 aaKnown RBP17.82■□□□□ 0.44
XPO1-206ENST00000428210 CDCA8Q53HL2 280 aa17.81■□□□□ 0.44
XPO1-206ENST00000428210 ARHGAP35Q9NRY4 1499 aa17.81■□□□□ 0.44
XPO1-206ENST00000428210 PLEKHG5O94827 1062 aa17.8■□□□□ 0.44
XPO1-206ENST00000428210 SMARCA4P51532 1647 aa17.79■□□□□ 0.44
XPO1-206ENST00000428210 KNSTRNQ9Y448 316 aa17.78■□□□□ 0.44
XPO1-206ENST00000428210 CADPSQ9ULU8 1353 aa17.78■□□□□ 0.44
XPO1-206ENST00000428210 ATAD2BQ9ULI0 1458 aa17.78■□□□□ 0.44
XPO1-206ENST00000428210 CARMIL2Q6F5E8 1435 aa17.77■□□□□ 0.44
XPO1-206ENST00000428210 HSP90AA1P07900 732 aaKnown RBP17.77■□□□□ 0.44
XPO1-206ENST00000428210 KANK4Q5T7N3 995 aaPredicted RBP17.77■□□□□ 0.44
XPO1-206ENST00000428210 CFAP53Q96M91 514 aa17.74■□□□□ 0.43
XPO1-206ENST00000428210 SETD5Q9C0A6 1442 aa17.73■□□□□ 0.43
XPO1-206ENST00000428210 KANK1Q14678 1352 aa17.72■□□□□ 0.43
XPO1-206ENST00000428210 SENP3-EIF4A1A0A087X0R7 540 aa17.72■□□□□ 0.43
XPO1-206ENST00000428210 FMN1Q68DA7 1419 aa17.72■□□□□ 0.43
XPO1-206ENST00000428210 POGKQ9P215 609 aa17.7■□□□□ 0.42
XPO1-206ENST00000428210 CDK11BP21127 795 aaKnown RBP17.69■□□□□ 0.42
XPO1-206ENST00000428210 DCAF11Q8TEB1 546 aa17.69■□□□□ 0.42
XPO1-206ENST00000428210 RAPGEF2Q9Y4G8 1499 aa17.69■□□□□ 0.42
XPO1-206ENST00000428210 A0A0G2JS52 829 aa17.68■□□□□ 0.42
XPO1-206ENST00000428210 PPM1GO15355 546 aaPredicted RBP17.68■□□□□ 0.42
XPO1-206ENST00000428210 MYH16Q9H6N6 1097 aa17.68■□□□□ 0.42
XPO1-206ENST00000428210 FHOD3Q2V2M9 1422 aa17.63■□□□□ 0.41
XPO1-206ENST00000428210 MLECQ14165 292 aa17.63■□□□□ 0.41
XPO1-206ENST00000428210 CC2D1BQ5T0F9 858 aaKnown RBP17.62■□□□□ 0.41
XPO1-206ENST00000428210 PKD2Q13563 968 aa17.61■□□□□ 0.41
XPO1-206ENST00000428210 TIMELESSQ9UNS1 1208 aa17.61■□□□□ 0.41
XPO1-206ENST00000428210 TRHP20396 242 aaPredicted RBP17.6■□□□□ 0.41
XPO1-206ENST00000428210 FOXD1Q16676 465 aa17.6■□□□□ 0.41
XPO1-206ENST00000428210 TMF1P82094 1093 aa17.6■□□□□ 0.41
XPO1-206ENST00000428210 HAP1P54257 671 aaPredicted RBP17.6■□□□□ 0.41
XPO1-206ENST00000428210 FANCD2Q9BXW9 1451 aa17.6■□□□□ 0.41
XPO1-206ENST00000428210 TNNT2P45379 298 aaPredicted RBP17.59■□□□□ 0.41
XPO1-206ENST00000428210 NEUROD2Q15784 382 aa17.58■□□□□ 0.41
XPO1-206ENST00000428210 RAB3GAP2Q9H2M9 1393 aa17.58■□□□□ 0.4
XPO1-206ENST00000428210 GGT6Q6P531 493 aa17.58■□□□□ 0.4
XPO1-206ENST00000428210 MAPK8IP3Q9UPT6 1336 aa17.57■□□□□ 0.4
XPO1-206ENST00000428210 NUDCQ9Y266 331 aa17.56■□□□□ 0.4
XPO1-206ENST00000428210 ARXQ96QS3 562 aa17.56■□□□□ 0.4
XPO1-206ENST00000428210 SUPT16HQ9Y5B9 1047 aaKnown RBP17.56■□□□□ 0.4
XPO1-206ENST00000428210 EFCAB2Q5VUJ9 269 aa17.55■□□□□ 0.4
XPO1-206ENST00000428210 HSPA5P11021 654 aaKnown RBP17.54■□□□□ 0.4
XPO1-206ENST00000428210 ANKRD30AQ9BXX3 1397 aa17.54■□□□□ 0.4
XPO1-206ENST00000428210 RUSC2Q8N2Y8 1516 aa17.54■□□□□ 0.4
XPO1-206ENST00000428210 MPHOSPH9Q99550 1183 aa17.53■□□□□ 0.4
XPO1-206ENST00000428210 LAS1LQ9Y4W2 734 aaKnown RBP17.53■□□□□ 0.4
XPO1-206ENST00000428210 LMOD2Q6P5Q4 547 aa17.53■□□□□ 0.4
XPO1-206ENST00000428210 NUP155O75694 1391 aa17.52■□□□□ 0.39
XPO1-206ENST00000428210 HDGFP51858 240 aaKnown RBP17.51■□□□□ 0.39
XPO1-206ENST00000428210 FTSJ3Q8IY81 847 aaKnown RBP17.5■□□□□ 0.39
XPO1-206ENST00000428210 CCDC18Q5T9S5 1454 aa17.49■□□□□ 0.39
XPO1-206ENST00000428210 HNRNPMP52272 730 aaKnown RBP eCLIP17.49■□□□□ 0.395e-8■■□□□ 13.2
XPO1-206ENST00000428210 SRPK2P78362 688 aaKnown RBP17.49■□□□□ 0.39
XPO1-206ENST00000428210 U2SURPO15042 1029 aaKnown RBP17.49■□□□□ 0.39
XPO1-206ENST00000428210 SAFB2Q14151 953 aaKnown RBP eCLIP17.49■□□□□ 0.39
XPO1-206ENST00000428210 NBR1Q14596 966 aa17.49■□□□□ 0.39
XPO1-206ENST00000428210 JPH4Q96JJ6 628 aa17.48■□□□□ 0.39
XPO1-206ENST00000428210 STK26Q9P289 416 aa17.44■□□□□ 0.38
XPO1-206ENST00000428210 ROCK2O75116 1388 aaKnown RBP17.44■□□□□ 0.38
XPO1-206ENST00000428210 MORC1Q86VD1 984 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms