RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 TMC1Q8TDI8 760 aa13.33□□□□□ -0.28
CLTCL1-202ENST00000427926 MYH16Q9H6N6 1097 aa13.32□□□□□ -0.28
CLTCL1-202ENST00000427926 ACIN1Q9UKV3 1341 aaKnown RBP13.31□□□□□ -0.28
CLTCL1-202ENST00000427926 ANP32BQ92688 251 aaKnown RBP13.29□□□□□ -0.28
CLTCL1-202ENST00000427926 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.29□□□□□ -0.28
CLTCL1-202ENST00000427926 ANP32AP39687 249 aaKnown RBP13.27□□□□□ -0.29
CLTCL1-202ENST00000427926 MLECQ14165 292 aa13.26□□□□□ -0.29
CLTCL1-202ENST00000427926 FAM9BQ8IZU0 186 aa13.26□□□□□ -0.29
CLTCL1-202ENST00000427926 MYO15BQ96JP2 1530 aa13.25□□□□□ -0.29
CLTCL1-202ENST00000427926 PPM1GO15355 546 aaPredicted RBP13.24□□□□□ -0.29
CLTCL1-202ENST00000427926 POGKQ9P215 609 aa13.23□□□□□ -0.29
CLTCL1-202ENST00000427926 RGL3Q3MIN7 710 aa13.22□□□□□ -0.29
CLTCL1-202ENST00000427926 HDGFP51858 240 aaKnown RBP13.21□□□□□ -0.29
CLTCL1-202ENST00000427926 RSF1Q96T23 1441 aaPredicted RBP13.21□□□□□ -0.3
CLTCL1-202ENST00000427926 CFDP1Q9UEE9 299 aaPredicted RBP13.2□□□□□ -0.3
CLTCL1-202ENST00000427926 CFAP53Q96M91 514 aa13.2□□□□□ -0.3
CLTCL1-202ENST00000427926 RRP7BPQ9NSQ0 103 aa13.2□□□□□ -0.3
CLTCL1-202ENST00000427926 TULP1O00294 542 aaPredicted RBP13.18□□□□□ -0.3
CLTCL1-202ENST00000427926 HNRNPUQ00839 825 aaKnown RBP eCLIP13.18□□□□□ -0.3
CLTCL1-202ENST00000427926 AEBP2Q6ZN18 517 aaPredicted RBP13.17□□□□□ -0.3
CLTCL1-202ENST00000427926 EEA1Q15075 1411 aa13.16□□□□□ -0.3
CLTCL1-202ENST00000427926 BAZ1BQ9UIG0 1483 aaKnown RBP13.16□□□□□ -0.3
CLTCL1-202ENST00000427926 CDCA8Q53HL2 280 aa13.15□□□□□ -0.3
CLTCL1-202ENST00000427926 GOLGA2Q08379 1002 aa13.13□□□□□ -0.31
CLTCL1-202ENST00000427926 DDX10Q13206 875 aaKnown RBP13.13□□□□□ -0.31
CLTCL1-202ENST00000427926 MRS2Q9HD23 443 aa13.1□□□□□ -0.31
CLTCL1-202ENST00000427926 CCDC9Q9Y3X0 531 aaKnown RBP13.1□□□□□ -0.31
CLTCL1-202ENST00000427926 CLIP1P30622 1438 aa13.09□□□□□ -0.31
CLTCL1-202ENST00000427926 EIF4G2P78344 907 aaKnown RBP eCLIP13.09□□□□□ -0.31
CLTCL1-202ENST00000427926 MAPK8IP3Q9UPT6 1336 aa13.09□□□□□ -0.31
CLTCL1-202ENST00000427926 BAZ1AQ9NRL2 1556 aaPredicted RBP13.08□□□□□ -0.31
CLTCL1-202ENST00000427926 KNSTRNQ9Y448 316 aa13.08□□□□□ -0.32
CLTCL1-202ENST00000427926 KANK1Q14678 1352 aa13.07□□□□□ -0.32
CLTCL1-202ENST00000427926 NUDCQ9Y266 331 aa13.07□□□□□ -0.32
CLTCL1-202ENST00000427926 LAS1LQ9Y4W2 734 aaKnown RBP13.07□□□□□ -0.32
CLTCL1-202ENST00000427926 WRNQ14191 1432 aaPredicted RBP eCLIP13.06□□□□□ -0.32
CLTCL1-202ENST00000427926 SOX12O15370 315 aa13.05□□□□□ -0.32
CLTCL1-202ENST00000427926 GOLGA3Q08378 1498 aa13.05□□□□□ -0.32
CLTCL1-202ENST00000427926 TMX4Q9H1E5 349 aaPredicted RBP13.05□□□□□ -0.32
CLTCL1-202ENST00000427926 CCDC136Q96JN2 1154 aa13.04□□□□□ -0.32
CLTCL1-202ENST00000427926 CSB-PGBD3P0DP91 1061 aa13.02□□□□□ -0.32
CLTCL1-202ENST00000427926 OS9Q13438 667 aaPredicted RBP13.02□□□□□ -0.33
CLTCL1-202ENST00000427926 ZRSR1Q15695 479 aaKnown RBP13.01□□□□□ -0.33
CLTCL1-202ENST00000427926 GGT6Q6P531 493 aa13.01□□□□□ -0.33
CLTCL1-202ENST00000427926 NCLP19338 710 aaKnown RBP13□□□□□ -0.33
CLTCL1-202ENST00000427926 CASC1Q6TDU7 716 aa13□□□□□ -0.33
CLTCL1-202ENST00000427926 SMARCA2P51531 1590 aa13□□□□□ -0.33
CLTCL1-202ENST00000427926 ISY1Q9ULR0 285 aaKnown RBP13□□□□□ -0.33
CLTCL1-202ENST00000427926 CARD11Q9BXL7 1154 aa12.99□□□□□ -0.33
CLTCL1-202ENST00000427926 FKBP8Q14318 412 aa12.99□□□□□ -0.33
CLTCL1-202ENST00000427926 PAK3O75914 559 aaPredicted RBP12.99□□□□□ -0.33
CLTCL1-202ENST00000427926 TAOK2Q9UL54 1235 aa12.99□□□□□ -0.33
CLTCL1-202ENST00000427926 CEP162Q5TB80 1403 aa12.98□□□□□ -0.33
CLTCL1-202ENST00000427926 NEUROD2Q15784 382 aa12.98□□□□□ -0.33
CLTCL1-202ENST00000427926 FTSJ3Q8IY81 847 aaKnown RBP12.98□□□□□ -0.33
CLTCL1-202ENST00000427926 CECR2Q9BXF3 1484 aa12.98□□□□□ -0.33
CLTCL1-202ENST00000427926 TNNT2P45379 298 aaPredicted RBP12.98□□□□□ -0.33
CLTCL1-202ENST00000427926 SRPK2P78362 688 aaKnown RBP12.98□□□□□ -0.33
CLTCL1-202ENST00000427926 KIF27Q86VH2 1401 aa12.98□□□□□ -0.33
CLTCL1-202ENST00000427926 U2SURPO15042 1029 aaKnown RBP12.96□□□□□ -0.33
CLTCL1-202ENST00000427926 CCNB3Q8WWL7 1395 aa12.96□□□□□ -0.33
CLTCL1-202ENST00000427926 EIF5BO60841 1220 aaKnown RBP12.96□□□□□ -0.34
CLTCL1-202ENST00000427926 PNNQ9H307 717 aaKnown RBP12.95□□□□□ -0.34
CLTCL1-202ENST00000427926 CLSTN1O94985 981 aa12.95□□□□□ -0.34
CLTCL1-202ENST00000427926 NCBP3Q53F19 620 aaKnown RBP12.95□□□□□ -0.34
CLTCL1-202ENST00000427926 EIF4G1Q04637 1599 aaKnown RBP12.94□□□□□ -0.34
CLTCL1-202ENST00000427926 SAFB2Q14151 953 aaKnown RBP eCLIP12.94□□□□□ -0.341e-12■■■□□ 15
CLTCL1-202ENST00000427926 HIRIP3Q9BW71 556 aaPredicted RBP12.94□□□□□ -0.34
CLTCL1-202ENST00000427926 ZNF330Q9Y3S2 320 aaPredicted RBP12.94□□□□□ -0.34
CLTCL1-202ENST00000427926 CEP164Q9UPV0 1460 aa12.94□□□□□ -0.34
CLTCL1-202ENST00000427926 FGD1P98174 961 aa12.94□□□□□ -0.34
CLTCL1-202ENST00000427926 PDS5BQ9NTI5 1447 aa12.94□□□□□ -0.34
CLTCL1-202ENST00000427926 TNIKQ9UKE5 1360 aa12.93□□□□□ -0.34
CLTCL1-202ENST00000427926 EID1Q9Y6B2 187 aa12.92□□□□□ -0.34
CLTCL1-202ENST00000427926 STK26Q9P289 416 aa12.91□□□□□ -0.34
CLTCL1-202ENST00000427926 RTF1Q92541 710 aaKnown RBP12.9□□□□□ -0.34
CLTCL1-202ENST00000427926 NAP1L2Q9ULW6 460 aaPredicted RBP12.9□□□□□ -0.34
CLTCL1-202ENST00000427926 KCNJ4P48050 445 aa12.89□□□□□ -0.35
CLTCL1-202ENST00000427926 G3V3G9 751 aa12.89□□□□□ -0.35
CLTCL1-202ENST00000427926 DCAF8Q5TAQ9 597 aa12.89□□□□□ -0.35
CLTCL1-202ENST00000427926 CHMP4BQ9H444 224 aaKnown RBP12.89□□□□□ -0.35
CLTCL1-202ENST00000427926 CARMIL2Q6F5E8 1435 aa12.88□□□□□ -0.35
CLTCL1-202ENST00000427926 HDGFL2Q7Z4V5 671 aaPredicted RBP12.87□□□□□ -0.35
CLTCL1-202ENST00000427926 GOLGA6L22H0YM25 854 aa12.86□□□□□ -0.35
CLTCL1-202ENST00000427926 TPRNQ4KMQ1 711 aa12.85□□□□□ -0.35
CLTCL1-202ENST00000427926 MEX3CQ5U5Q3 659 aaKnown RBP12.85□□□□□ -0.35
CLTCL1-202ENST00000427926 BECN1Q14457 450 aa12.85□□□□□ -0.35
CLTCL1-202ENST00000427926 MIER1Q8N108 512 aa12.85□□□□□ -0.35
CLTCL1-202ENST00000427926 TMF1P82094 1093 aa12.84□□□□□ -0.35
CLTCL1-202ENST00000427926 PHF23Q9BUL5 403 aaPredicted RBP12.84□□□□□ -0.35
CLTCL1-202ENST00000427926 DCAF8L1A6NGE4 600 aa12.83□□□□□ -0.36
CLTCL1-202ENST00000427926 EFCAB2Q5VUJ9 269 aa12.83□□□□□ -0.36
CLTCL1-202ENST00000427926 DCAF11Q8TEB1 546 aa12.82□□□□□ -0.36
CLTCL1-202ENST00000427926 FRAT1Q92837 279 aaPredicted RBP12.82□□□□□ -0.36
CLTCL1-202ENST00000427926 CC2D1BQ5T0F9 858 aaKnown RBP12.82□□□□□ -0.36
CLTCL1-202ENST00000427926 MROH2BQ7Z745 1585 aa12.81□□□□□ -0.36
CLTCL1-202ENST00000427926 MORC1Q86VD1 984 aa12.81□□□□□ -0.36
CLTCL1-202ENST00000427926 SENP3-EIF4A1A0A087X0R7 540 aa12.81□□□□□ -0.36
CLTCL1-202ENST00000427926 MSH5O43196 834 aa12.8□□□□□ -0.36
CLTCL1-202ENST00000427926 MS4A1P11836 297 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms