RNA–Protein interactions for RNA: ENST00000427505.5

ZNF440-203, Transcript of zinc finger protein 440, humanhuman

TSL 3

Gene ZNF440, Length 920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-203ENST00000427505 CLCN6P51797 869 aa11.74□□□□□ -0.53
ZNF440-203ENST00000427505 PHF12Q96QT6 1004 aa11.73□□□□□ -0.53
ZNF440-203ENST00000427505 GALR2O43603 387 aaPredicted RBP11.72□□□□□ -0.53
ZNF440-203ENST00000427505 LHX8Q68G74 356 aa11.72□□□□□ -0.53
ZNF440-203ENST00000427505 FAM212AQ96EL1 285 aa11.71□□□□□ -0.53
ZNF440-203ENST00000427505 CCDC61Q9Y6R9 512 aa11.71□□□□□ -0.53
ZNF440-203ENST00000427505 TSPYL2Q9H2G4 693 aaPredicted RBP11.69□□□□□ -0.54
ZNF440-203ENST00000427505 DCBLD2Q96PD2 775 aa11.67□□□□□ -0.54
ZNF440-203ENST00000427505 GSE1Q14687 1217 aa11.64□□□□□ -0.55
ZNF440-203ENST00000427505 DCAF8Q5TAQ9 597 aa11.59□□□□□ -0.55
ZNF440-203ENST00000427505 KIF12Q96FN5 646 aa11.59□□□□□ -0.55
ZNF440-203ENST00000427505 MS4A3Q96HJ5 214 aa11.55□□□□□ -0.56
ZNF440-203ENST00000427505 SGIP1Q9BQI5 828 aa11.55□□□□□ -0.56
ZNF440-203ENST00000427505 CHRM1P11229 460 aaPredicted RBP11.54□□□□□ -0.56
ZNF440-203ENST00000427505 TRIM41Q8WV44 630 aa11.53□□□□□ -0.56
ZNF440-203ENST00000427505 PELP1Q8IZL8 1130 aaKnown RBP11.52□□□□□ -0.57
ZNF440-203ENST00000427505 MAP3K13O43283 966 aa11.51□□□□□ -0.57
ZNF440-203ENST00000427505 CIZ1Q9ULV3 898 aaPredicted RBP11.51□□□□□ -0.57
ZNF440-203ENST00000427505 PYGBP11216 843 aa11.49□□□□□ -0.57
ZNF440-203ENST00000427505 POTEB2H3BUK9 544 aa11.47□□□□□ -0.57
ZNF440-203ENST00000427505 ASTLQ6HA08 431 aaPredicted RBP11.46□□□□□ -0.57
ZNF440-203ENST00000427505 PCDHB13Q9Y5F0 798 aa11.46□□□□□ -0.57
ZNF440-203ENST00000427505 ATMINO43313 823 aaPredicted RBP11.43□□□□□ -0.58
ZNF440-203ENST00000427505 PKD2Q13563 968 aa11.43□□□□□ -0.58
ZNF440-203ENST00000427505 IFNL1Q8IU54 200 aa11.43□□□□□ -0.58
ZNF440-203ENST00000427505 ZNF467Q7Z7K2 595 aaPredicted RBP11.41□□□□□ -0.58
ZNF440-203ENST00000427505 TRPC6Q9Y210 931 aa11.41□□□□□ -0.58
ZNF440-203ENST00000427505 TIE1P35590 1138 aa11.39□□□□□ -0.59
ZNF440-203ENST00000427505 OTUD5Q96G74 571 aa11.39□□□□□ -0.59
ZNF440-203ENST00000427505 METRNQ9UJH8 293 aa11.37□□□□□ -0.59
ZNF440-203ENST00000427505 RNF25Q96BH1 459 aaPredicted RBP11.36□□□□□ -0.59
ZNF440-203ENST00000427505 ATN1P54259 1190 aaPredicted RBP11.35□□□□□ -0.59
ZNF440-203ENST00000427505 BMP2KQ9NSY1 1161 aaPredicted RBP11.35□□□□□ -0.59
ZNF440-203ENST00000427505 PCDHB8Q9UN66 801 aa11.35□□□□□ -0.59
ZNF440-203ENST00000427505 ECM2O94769 699 aaPredicted RBP11.33□□□□□ -0.6
ZNF440-203ENST00000427505 SLC39A7Q92504 469 aa11.33□□□□□ -0.6
ZNF440-203ENST00000427505 POTEJP0CG39 1038 aa11.32□□□□□ -0.6
ZNF440-203ENST00000427505 TTLL13PA6NNM8 815 aa11.31□□□□□ -0.6
ZNF440-203ENST00000427505 RIOK3O14730 519 aaKnown RBP11.3□□□□□ -0.6
ZNF440-203ENST00000427505 C7P10643 843 aa11.3□□□□□ -0.6
ZNF440-203ENST00000427505 PDAP1Q13442 181 aaKnown RBP11.29□□□□□ -0.6
ZNF440-203ENST00000427505 POTEFA5A3E0 1075 aa11.27□□□□□ -0.61
ZNF440-203ENST00000427505 AMER1Q5JTC6 1135 aaPredicted RBP11.27□□□□□ -0.61
ZNF440-203ENST00000427505 PSEN1P49768 467 aa11.26□□□□□ -0.61
ZNF440-203ENST00000427505 TMEM106CQ9BVX2 250 aa11.26□□□□□ -0.61
ZNF440-203ENST00000427505 RGL2O15211 777 aa11.25□□□□□ -0.61
ZNF440-203ENST00000427505 VGFO15240 615 aaPredicted RBP11.25□□□□□ -0.61
ZNF440-203ENST00000427505 TAOK2Q9UL54 1235 aa11.22□□□□□ -0.61
ZNF440-203ENST00000427505 TRIM35Q9UPQ4 493 aa11.22□□□□□ -0.61
ZNF440-203ENST00000427505 IER5LQ5T953 404 aa11.2□□□□□ -0.62
ZNF440-203ENST00000427505 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.18□□□□□ -0.62
ZNF440-203ENST00000427505 ZFP91Q96JP5 570 aaPredicted RBP11.18□□□□□ -0.62
ZNF440-203ENST00000427505 RTN4Q9NQC3 1192 aaKnown RBP11.18□□□□□ -0.62
ZNF440-203ENST00000427505 COLQQ9Y215 455 aaPredicted RBP11.17□□□□□ -0.62
ZNF440-203ENST00000427505 NISCHQ9Y2I1 1504 aa11.12□□□□□ -0.63
ZNF440-203ENST00000427505 MAMSTRQ6ZN01 415 aa11.11□□□□□ -0.63
ZNF440-203ENST00000427505 IRX5P78411 483 aaPredicted RBP11.1□□□□□ -0.63
ZNF440-203ENST00000427505 ILDR1Q86SU0 546 aaPredicted RBP11.1□□□□□ -0.63
ZNF440-203ENST00000427505 CABP2Q9NPB3 220 aa11.1□□□□□ -0.63
ZNF440-203ENST00000427505 BCL11BQ9C0K0 894 aaPredicted RBP11.09□□□□□ -0.63
ZNF440-203ENST00000427505 GOLGA2Q08379 1002 aa11.08□□□□□ -0.64
ZNF440-203ENST00000427505 HS6ST3Q8IZP7 471 aa11.08□□□□□ -0.64
ZNF440-203ENST00000427505 SCUBE2Q9NQ36 999 aa11.08□□□□□ -0.64
ZNF440-203ENST00000427505 STK25O00506 426 aa11.07□□□□□ -0.64
ZNF440-203ENST00000427505 SEC24BO95487 1268 aa11.07□□□□□ -0.64
ZNF440-203ENST00000427505 LCE2DQ5TA82 110 aaPredicted RBP11.07□□□□□ -0.64
ZNF440-203ENST00000427505 MKRN3Q13064 507 aaKnown RBP11.06□□□□□ -0.64
ZNF440-203ENST00000427505 POTEMA6NI47 508 aa11.05□□□□□ -0.64
ZNF440-203ENST00000427505 DNAJC5Q9H3Z4 198 aa11.05□□□□□ -0.64
ZNF440-203ENST00000427505 EFCAB3Q8N7B9 438 aa11.04□□□□□ -0.64
ZNF440-203ENST00000427505 STK24Q9Y6E0 443 aa11.04□□□□□ -0.64
ZNF440-203ENST00000427505 POTEGQ6S5H5 508 aa11.03□□□□□ -0.64
ZNF440-203ENST00000427505 PDCD7Q8N8D1 485 aaKnown RBP11.03□□□□□ -0.64
ZNF440-203ENST00000427505 OCEL1Q9H607 264 aa11.03□□□□□ -0.64
ZNF440-203ENST00000427505 PLCG2P16885 1265 aa11.02□□□□□ -0.65
ZNF440-203ENST00000427505 SOX12O15370 315 aa11.01□□□□□ -0.65
ZNF440-203ENST00000427505 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.99□□□□□ -0.65
ZNF440-203ENST00000427505 CHGAP10645 457 aaKnown RBP10.97□□□□□ -0.65
ZNF440-203ENST00000427505 PLSCR2Q9NRY7 297 aa10.96□□□□□ -0.65
ZNF440-203ENST00000427505 FBXO22Q8NEZ5 403 aa10.95□□□□□ -0.66
ZNF440-203ENST00000427505 FAM163AQ96GL9 167 aaPredicted RBP10.94□□□□□ -0.66
ZNF440-203ENST00000427505 MFRPQ9BY79 579 aa10.94□□□□□ -0.66
ZNF440-203ENST00000427505 MS4A4AQ96JQ5 239 aa10.93□□□□□ -0.66
ZNF440-203ENST00000427505 PHF8Q9UPP1 1060 aa10.93□□□□□ -0.66
ZNF440-203ENST00000427505 NLRP6P59044 892 aa10.92□□□□□ -0.66
ZNF440-203ENST00000427505 DCAF8L2P0C7V8 631 aa10.91□□□□□ -0.66
ZNF440-203ENST00000427505 NKX1-1Q15270 411 aaPredicted RBP10.89□□□□□ -0.67
ZNF440-203ENST00000427505 SLAIN1Q8ND83 568 aa10.88□□□□□ -0.67
ZNF440-203ENST00000427505 DPY19L2Q6NUT2 758 aa10.87□□□□□ -0.67
ZNF440-203ENST00000427505 L3MBTL3Q96JM7 780 aaPredicted RBP10.87□□□□□ -0.67
ZNF440-203ENST00000427505 TMEM121BQ9BXQ6 578 aaPredicted RBP10.85□□□□□ -0.67
ZNF440-203ENST00000427505 RYDENQ9NUL5 291 aaKnown RBP10.83□□□□□ -0.68
ZNF440-203ENST00000427505 BOLA1Q9Y3E2 137 aa10.83□□□□□ -0.68
ZNF440-203ENST00000427505 MICALL2Q8IY33 904 aa10.8□□□□□ -0.68
ZNF440-203ENST00000427505 BBXQ8WY36 941 aaPredicted RBP10.8□□□□□ -0.68
ZNF440-203ENST00000427505 ST18O60284 1047 aa10.78□□□□□ -0.68
ZNF440-203ENST00000427505 PCDH10Q9P2E7 1040 aa10.78□□□□□ -0.68
ZNF440-203ENST00000427505 GTPBP6O43824 516 aaPredicted RBP10.77□□□□□ -0.69
ZNF440-203ENST00000427505 C3orf67Q6ZVT6 689 aa10.77□□□□□ -0.69
ZNF440-203ENST00000427505 G3V3G9 751 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms