RNA–Protein interactions for RNA: ENST00000427341.1

AL365356.3-201, humanhuman

TSL 3 BASIC

Gene AL365356.3, Length 657 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL365356.3-201ENST00000427341 USP35Q9P2H5 1018 aa11.95□□□□□ -0.5
AL365356.3-201ENST00000427341 CUX2O14529 1486 aa11.95□□□□□ -0.5
AL365356.3-201ENST00000427341 AAMPQ13685 434 aa11.94□□□□□ -0.5
AL365356.3-201ENST00000427341 PDS5BQ9NTI5 1447 aa11.94□□□□□ -0.5
AL365356.3-201ENST00000427341 MSH5O43196 834 aa11.93□□□□□ -0.5
AL365356.3-201ENST00000427341 CCDC88BA6NC98 1476 aa11.93□□□□□ -0.5
AL365356.3-201ENST00000427341 KLHL34Q8N239 644 aa11.91□□□□□ -0.5
AL365356.3-201ENST00000427341 CFTRP13569 1480 aa11.9□□□□□ -0.5
AL365356.3-201ENST00000427341 MIER1Q8N108 512 aa11.89□□□□□ -0.51
AL365356.3-201ENST00000427341 CDK11AQ9UQ88 783 aaPredicted RBP11.89□□□□□ -0.51
AL365356.3-201ENST00000427341 RRP9O43818 475 aaKnown RBP11.88□□□□□ -0.51
AL365356.3-201ENST00000427341 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.87□□□□□ -0.51
AL365356.3-201ENST00000427341 FANCD2Q9BXW9 1451 aa11.87□□□□□ -0.51
AL365356.3-201ENST00000427341 VSIG10Q8N0Z9 540 aa11.86□□□□□ -0.51
AL365356.3-201ENST00000427341 MRC2Q9UBG0 1479 aa11.85□□□□□ -0.51
AL365356.3-201ENST00000427341 NCLP19338 710 aaKnown RBP11.85□□□□□ -0.51
AL365356.3-201ENST00000427341 CEP164Q9UPV0 1460 aa11.84□□□□□ -0.51
AL365356.3-201ENST00000427341 BRD2P25440 801 aaKnown RBP11.84□□□□□ -0.51
AL365356.3-201ENST00000427341 NOP58Q9Y2X3 529 aaKnown RBP11.84□□□□□ -0.51
AL365356.3-201ENST00000427341 WDR62O43379 1518 aa11.82□□□□□ -0.52
AL365356.3-201ENST00000427341 RBM10P98175 930 aaKnown RBP11.82□□□□□ -0.52
AL365356.3-201ENST00000427341 RSPH4AQ5TD94 716 aa11.81□□□□□ -0.52
AL365356.3-201ENST00000427341 WASHC2CQ9Y4E1 1318 aa11.81□□□□□ -0.52
AL365356.3-201ENST00000427341 PRDM2Q13029 1718 aa11.8□□□□□ -0.52
AL365356.3-201ENST00000427341 FAM43AQ8N2R8 423 aa11.79□□□□□ -0.52
AL365356.3-201ENST00000427341 URB2Q14146 1524 aaKnown RBP11.78□□□□□ -0.52
AL365356.3-201ENST00000427341 IL27Q8NEV9 243 aa11.76□□□□□ -0.53
AL365356.3-201ENST00000427341 TIMELESSQ9UNS1 1208 aa11.76□□□□□ -0.53
AL365356.3-201ENST00000427341 WASHC2AQ641Q2 1341 aa11.76□□□□□ -0.53
AL365356.3-201ENST00000427341 CENPJQ9HC77 1338 aaPredicted RBP11.75□□□□□ -0.53
AL365356.3-201ENST00000427341 BCL11BQ9C0K0 894 aaPredicted RBP11.74□□□□□ -0.53
AL365356.3-201ENST00000427341 FBXO3Q9UK99 471 aa11.73□□□□□ -0.53
AL365356.3-201ENST00000427341 HSP90AA2PQ14568 343 aaPredicted RBP11.72□□□□□ -0.53
AL365356.3-201ENST00000427341 AMER1Q5JTC6 1135 aaPredicted RBP11.72□□□□□ -0.53
AL365356.3-201ENST00000427341 DNAJC5Q9H3Z4 198 aa11.72□□□□□ -0.53
AL365356.3-201ENST00000427341 FKBP8Q14318 412 aa11.71□□□□□ -0.53
AL365356.3-201ENST00000427341 NAP1L5Q96NT1 182 aaPredicted RBP11.7□□□□□ -0.54
AL365356.3-201ENST00000427341 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.69□□□□□ -0.54
AL365356.3-201ENST00000427341 CALD1Q05682 793 aaKnown RBP11.69□□□□□ -0.54
AL365356.3-201ENST00000427341 BCCIPQ9P287 314 aaKnown RBP eCLIP11.69□□□□□ -0.54
AL365356.3-201ENST00000427341 A0A0U1RQG5 324 aaPredicted RBP11.68□□□□□ -0.54
AL365356.3-201ENST00000427341 PPM1GO15355 546 aaPredicted RBP11.68□□□□□ -0.54
AL365356.3-201ENST00000427341 TOPBP1Q92547 1522 aa11.67□□□□□ -0.54
AL365356.3-201ENST00000427341 LOC105371045A0A1W2PR82 267 aa11.67□□□□□ -0.54
AL365356.3-201ENST00000427341 ANP32AP39687 249 aaKnown RBP11.66□□□□□ -0.54
AL365356.3-201ENST00000427341 NPM2Q86SE8 214 aaKnown RBP11.66□□□□□ -0.54
AL365356.3-201ENST00000427341 RTN4Q9NQC3 1192 aaKnown RBP11.66□□□□□ -0.54
AL365356.3-201ENST00000427341 DNMBPQ6XZF7 1577 aa11.64□□□□□ -0.55
AL365356.3-201ENST00000427341 HSP90AA1P07900 732 aaKnown RBP11.64□□□□□ -0.55
AL365356.3-201ENST00000427341 HSP90B1P14625 803 aaKnown RBP11.64□□□□□ -0.55
AL365356.3-201ENST00000427341 IPO4Q8TEX9 1081 aaKnown RBP11.63□□□□□ -0.55
AL365356.3-201ENST00000427341 ARID4BQ4LE39 1312 aaPredicted RBP11.62□□□□□ -0.55
AL365356.3-201ENST00000427341 ZNF608Q9ULD9 1512 aaPredicted RBP11.62□□□□□ -0.55
AL365356.3-201ENST00000427341 CNGB1Q14028 1251 aaPredicted RBP11.6□□□□□ -0.55
AL365356.3-201ENST00000427341 ZBTB47Q9UFB7 747 aaPredicted RBP11.6□□□□□ -0.55
AL365356.3-201ENST00000427341 ABCC8Q09428 1581 aa11.59□□□□□ -0.55
AL365356.3-201ENST00000427341 TULP1O00294 542 aaPredicted RBP11.59□□□□□ -0.55
AL365356.3-201ENST00000427341 NEFMP07197 916 aa11.59□□□□□ -0.55
AL365356.3-201ENST00000427341 IPO9Q96P70 1041 aaKnown RBP11.59□□□□□ -0.55
AL365356.3-201ENST00000427341 IFT140Q96RY7 1462 aa11.58□□□□□ -0.56
AL365356.3-201ENST00000427341 NBR1Q14596 966 aa11.58□□□□□ -0.56
AL365356.3-201ENST00000427341 ARID3AQ99856 593 aa11.58□□□□□ -0.56
AL365356.3-201ENST00000427341 CUX1P39880 1505 aa11.58□□□□□ -0.56
AL365356.3-201ENST00000427341 POLA1P09884 1462 aaPredicted RBP11.57□□□□□ -0.56
AL365356.3-201ENST00000427341 RAD54L2Q9Y4B4 1467 aa11.57□□□□□ -0.56
AL365356.3-201ENST00000427341 VGFO15240 615 aaPredicted RBP11.57□□□□□ -0.56
AL365356.3-201ENST00000427341 ANP32BQ92688 251 aaKnown RBP11.57□□□□□ -0.56
AL365356.3-201ENST00000427341 TARBP1Q13395 1621 aaKnown RBP11.57□□□□□ -0.56
AL365356.3-201ENST00000427341 CANXP27824 592 aaKnown RBP11.55□□□□□ -0.56
AL365356.3-201ENST00000427341 MAP7D2Q96T17 732 aa11.55□□□□□ -0.56
AL365356.3-201ENST00000427341 NAP1L2Q9ULW6 460 aaPredicted RBP11.55□□□□□ -0.56
AL365356.3-201ENST00000427341 AQRO60306 1485 aaKnown RBP eCLIP11.54□□□□□ -0.56
AL365356.3-201ENST00000427341 FGD5Q6ZNL6 1462 aa11.54□□□□□ -0.56
AL365356.3-201ENST00000427341 EIF4G3O43432 1585 aaKnown RBP11.54□□□□□ -0.56
AL365356.3-201ENST00000427341 EEA1Q15075 1411 aa11.53□□□□□ -0.56
AL365356.3-201ENST00000427341 HMGB1P09429 215 aaKnown RBP11.53□□□□□ -0.56
AL365356.3-201ENST00000427341 CNKSR2Q8WXI2 1034 aa11.53□□□□□ -0.56
AL365356.3-201ENST00000427341 PDCL3Q9H2J4 239 aa11.53□□□□□ -0.56
AL365356.3-201ENST00000427341 SOGA1O94964 1423 aa11.52□□□□□ -0.56
AL365356.3-201ENST00000427341 GSE1Q14687 1217 aa11.52□□□□□ -0.57
AL365356.3-201ENST00000427341 TEX2Q8IWB9 1127 aa11.52□□□□□ -0.57
AL365356.3-201ENST00000427341 BCANQ96GW7 911 aa11.52□□□□□ -0.57
AL365356.3-201ENST00000427341 PPP4R2Q9NY27 417 aa11.51□□□□□ -0.57
AL365356.3-201ENST00000427341 CDK11BP21127 795 aaKnown RBP11.5□□□□□ -0.57
AL365356.3-201ENST00000427341 CHMP4AQ9BY43 222 aa11.5□□□□□ -0.57
AL365356.3-201ENST00000427341 TDRD9Q8NDG6 1382 aaKnown RBP11.5□□□□□ -0.57
AL365356.3-201ENST00000427341 WRNQ14191 1432 aaPredicted RBP eCLIP11.5□□□□□ -0.57
AL365356.3-201ENST00000427341 TPM2P07951 284 aa11.48□□□□□ -0.57
AL365356.3-201ENST00000427341 CCER2I3L3R5 266 aa11.47□□□□□ -0.57
AL365356.3-201ENST00000427341 SYNJ1O43426 1573 aa11.46□□□□□ -0.57
AL365356.3-201ENST00000427341 FTSJ3Q8IY81 847 aaKnown RBP11.46□□□□□ -0.57
AL365356.3-201ENST00000427341 OSCARQ8IYS5 282 aa11.46□□□□□ -0.57
AL365356.3-201ENST00000427341 BBXQ8WY36 941 aaPredicted RBP11.46□□□□□ -0.57
AL365356.3-201ENST00000427341 WDR97A6NE52 1622 aa11.46□□□□□ -0.58
AL365356.3-201ENST00000427341 TAF3Q5VWG9 929 aa11.45□□□□□ -0.58
AL365356.3-201ENST00000427341 MTERF4Q7Z6M4 381 aaKnown RBP11.45□□□□□ -0.58
AL365356.3-201ENST00000427341 CHRM1P11229 460 aaPredicted RBP11.44□□□□□ -0.58
AL365356.3-201ENST00000427341 C14orf37Q86TY3 774 aa11.44□□□□□ -0.58
AL365356.3-201ENST00000427341 BIVM-ERCC5R4GMW8 1640 aa11.43□□□□□ -0.58
AL365356.3-201ENST00000427341 SMAP1Q8IYB5 467 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms