RNA–Protein interactions for RNA: ENST00000425967.7

FGFR1-211, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 5,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-211ENST00000425967 MIER1Q8N108 512 aa16.72■□□□□ 0.27
FGFR1-211ENST00000425967 EIF4G2P78344 907 aaKnown RBP eCLIP16.71■□□□□ 0.27
FGFR1-211ENST00000425967 PLEKHD1A6NEE1 506 aa16.69■□□□□ 0.26
FGFR1-211ENST00000425967 KCNH8Q96L42 1107 aa16.69■□□□□ 0.26
FGFR1-211ENST00000425967 HIRIP3Q9BW71 556 aaPredicted RBP16.67■□□□□ 0.26
FGFR1-211ENST00000425967 PLEKHG5O94827 1062 aa16.66■□□□□ 0.26
FGFR1-211ENST00000425967 RRP7BPQ9NSQ0 103 aa16.66■□□□□ 0.26
FGFR1-211ENST00000425967 RSF1Q96T23 1441 aaPredicted RBP16.65■□□□□ 0.26
FGFR1-211ENST00000425967 NBR1Q14596 966 aa16.64■□□□□ 0.25
FGFR1-211ENST00000425967 CFAP53Q96M91 514 aa16.64■□□□□ 0.25
FGFR1-211ENST00000425967 CLIP1P30622 1438 aa16.64■□□□□ 0.25
FGFR1-211ENST00000425967 HAP1P54257 671 aaPredicted RBP16.64■□□□□ 0.25
FGFR1-211ENST00000425967 IRX6P78412 446 aaPredicted RBP16.64■□□□□ 0.25
FGFR1-211ENST00000425967 CDCA8Q53HL2 280 aa16.63■□□□□ 0.25
FGFR1-211ENST00000425967 ARXQ96QS3 562 aa16.62■□□□□ 0.25
FGFR1-211ENST00000425967 SENP3Q9H4L4 574 aaPredicted RBP16.62■□□□□ 0.25
FGFR1-211ENST00000425967 GLIPR1L2Q4G1C9 344 aa16.62■□□□□ 0.25
FGFR1-211ENST00000425967 NCLP19338 710 aaKnown RBP16.61■□□□□ 0.25
FGFR1-211ENST00000425967 ARID4BQ4LE39 1312 aaPredicted RBP16.6■□□□□ 0.25
FGFR1-211ENST00000425967 BECN1Q14457 450 aa16.6■□□□□ 0.25
FGFR1-211ENST00000425967 RGL3Q3MIN7 710 aa16.59■□□□□ 0.25
FGFR1-211ENST00000425967 KNSTRNQ9Y448 316 aa16.56■□□□□ 0.24
FGFR1-211ENST00000425967 DDRGK1Q96HY6 314 aa16.56■□□□□ 0.24
FGFR1-211ENST00000425967 GOLGA6L22H0YM25 854 aa16.54■□□□□ 0.24
FGFR1-211ENST00000425967 CFDP1Q9UEE9 299 aaPredicted RBP16.54■□□□□ 0.24
FGFR1-211ENST00000425967 ANP32EQ9BTT0 268 aa16.53■□□□□ 0.24
FGFR1-211ENST00000425967 NACADO15069 1562 aa16.52■□□□□ 0.24
FGFR1-211ENST00000425967 PPM1GO15355 546 aaPredicted RBP16.51■□□□□ 0.23
FGFR1-211ENST00000425967 CASC1Q6TDU7 716 aa16.51■□□□□ 0.23
FGFR1-211ENST00000425967 EEA1Q15075 1411 aa16.49■□□□□ 0.23
FGFR1-211ENST00000425967 ZRSR1Q15695 479 aaKnown RBP16.49■□□□□ 0.23
FGFR1-211ENST00000425967 RB1CC1Q8TDY2 1594 aa16.48■□□□□ 0.23
FGFR1-211ENST00000425967 MAPK8IP3Q9UPT6 1336 aa16.48■□□□□ 0.23
FGFR1-211ENST00000425967 FTSJ3Q8IY81 847 aaKnown RBP16.48■□□□□ 0.23
FGFR1-211ENST00000425967 NUDCQ9Y266 331 aa16.48■□□□□ 0.23
FGFR1-211ENST00000425967 CARD11Q9BXL7 1154 aa16.47■□□□□ 0.23
FGFR1-211ENST00000425967 GOLGA3Q08378 1498 aa16.47■□□□□ 0.23
FGFR1-211ENST00000425967 TRIM44Q96DX7 344 aaPredicted RBP16.46■□□□□ 0.23
FGFR1-211ENST00000425967 POGKQ9P215 609 aa16.46■□□□□ 0.23
FGFR1-211ENST00000425967 CEP162Q5TB80 1403 aa16.45■□□□□ 0.22
FGFR1-211ENST00000425967 LMOD2Q6P5Q4 547 aa16.43■□□□□ 0.22
FGFR1-211ENST00000425967 LAS1LQ9Y4W2 734 aaKnown RBP16.41■□□□□ 0.22
FGFR1-211ENST00000425967 SENP3-EIF4A1A0A087X0R7 540 aa16.41■□□□□ 0.22
FGFR1-211ENST00000425967 CHMP4BQ9H444 224 aaKnown RBP16.41■□□□□ 0.22
FGFR1-211ENST00000425967 NEUROD2Q15784 382 aa16.4■□□□□ 0.22
FGFR1-211ENST00000425967 KIF27Q86VH2 1401 aa16.39■□□□□ 0.21
FGFR1-211ENST00000425967 NPHP1O15259 732 aa16.39■□□□□ 0.21
FGFR1-211ENST00000425967 PTMAP06454 111 aaKnown RBP16.37■□□□□ 0.21
FGFR1-211ENST00000425967 WRNQ14191 1432 aaPredicted RBP eCLIP16.36■□□□□ 0.21
FGFR1-211ENST00000425967 PNNQ9H307 717 aaKnown RBP16.36■□□□□ 0.21
FGFR1-211ENST00000425967 MS4A1P11836 297 aa16.35■□□□□ 0.21
FGFR1-211ENST00000425967 SUPT16HQ9Y5B9 1047 aaKnown RBP16.35■□□□□ 0.21
FGFR1-211ENST00000425967 HDGFP51858 240 aaKnown RBP16.33■□□□□ 0.2
FGFR1-211ENST00000425967 OS9Q13438 667 aaPredicted RBP16.33■□□□□ 0.2
FGFR1-211ENST00000425967 BAZ1BQ9UIG0 1483 aaKnown RBP16.32■□□□□ 0.2
FGFR1-211ENST00000425967 FRAT1Q92837 279 aaPredicted RBP16.31■□□□□ 0.2
FGFR1-211ENST00000425967 U2SURPO15042 1029 aaKnown RBP16.3■□□□□ 0.2
FGFR1-211ENST00000425967 TULP1O00294 542 aaPredicted RBP16.3■□□□□ 0.2
FGFR1-211ENST00000425967 TNNT2P45379 298 aaPredicted RBP16.3■□□□□ 0.2
FGFR1-211ENST00000425967 ERCC6Q03468 1493 aa16.3■□□□□ 0.2
FGFR1-211ENST00000425967 FGD1P98174 961 aa16.29■□□□□ 0.2
FGFR1-211ENST00000425967 KANK1Q14678 1352 aa16.29■□□□□ 0.2
FGFR1-211ENST00000425967 TPRNQ4KMQ1 711 aa16.28■□□□□ 0.2
FGFR1-211ENST00000425967 CCNB3Q8WWL7 1395 aa16.28■□□□□ 0.2
FGFR1-211ENST00000425967 CEP164Q9UPV0 1460 aa16.28■□□□□ 0.2
FGFR1-211ENST00000425967 SIN3AQ96ST3 1273 aa16.28■□□□□ 0.2
FGFR1-211ENST00000425967 TNIKQ9UKE5 1360 aa16.27■□□□□ 0.2
FGFR1-211ENST00000425967 GOLGA2Q08379 1002 aa16.27■□□□□ 0.2
FGFR1-211ENST00000425967 TMF1P82094 1093 aa16.27■□□□□ 0.19
FGFR1-211ENST00000425967 CC2D1BQ5T0F9 858 aaKnown RBP16.26■□□□□ 0.19
FGFR1-211ENST00000425967 DNTTIP2Q5QJE6 756 aaKnown RBP16.26■□□□□ 0.19
FGFR1-211ENST00000425967 KCNJ4P48050 445 aa16.26■□□□□ 0.19
FGFR1-211ENST00000425967 RGS3P49796 1198 aa16.25■□□□□ 0.19
FGFR1-211ENST00000425967 PPP4R2Q9NY27 417 aa16.23■□□□□ 0.19
FGFR1-211ENST00000425967 GOLGA6L6A8MZA4 724 aa16.23■□□□□ 0.19
FGFR1-211ENST00000425967 HSP90AB1P08238 724 aaKnown RBP16.21■□□□□ 0.19
FGFR1-211ENST00000425967 TAOK2Q9UL54 1235 aa16.21■□□□□ 0.19
FGFR1-211ENST00000425967 DCAF11Q8TEB1 546 aa16.21■□□□□ 0.19
FGFR1-211ENST00000425967 TRHP20396 242 aaPredicted RBP16.21■□□□□ 0.18
FGFR1-211ENST00000425967 SRPK2P78362 688 aaKnown RBP16.21■□□□□ 0.18
FGFR1-211ENST00000425967 NAP1L2Q9ULW6 460 aaPredicted RBP16.2■□□□□ 0.18
FGFR1-211ENST00000425967 FHAD1B1AJZ9 1412 aa16.19■□□□□ 0.18
FGFR1-211ENST00000425967 MLECQ14165 292 aa16.19■□□□□ 0.18
FGFR1-211ENST00000425967 PLCB2Q00722 1185 aa16.18■□□□□ 0.18
FGFR1-211ENST00000425967 NRDCO43847 1150 aa16.18■□□□□ 0.18
FGFR1-211ENST00000425967 ERICH6BQ5W0A0 696 aa16.17■□□□□ 0.18
FGFR1-211ENST00000425967 MORC1Q86VD1 984 aa16.17■□□□□ 0.18
FGFR1-211ENST00000425967 GOLGA6L4A6NEF3 574 aa16.16■□□□□ 0.18
FGFR1-211ENST00000425967 SOX12O15370 315 aa16.15■□□□□ 0.18
FGFR1-211ENST00000425967 RTF1Q92541 710 aaKnown RBP16.15■□□□□ 0.18
FGFR1-211ENST00000425967 MCCP23508 829 aa16.14■□□□□ 0.17
FGFR1-211ENST00000425967 CFAP44Q96MT7 982 aa16.13■□□□□ 0.17
FGFR1-211ENST00000425967 TIMELESSQ9UNS1 1208 aa16.12■□□□□ 0.17
FGFR1-211ENST00000425967 B4GALNT3Q6L9W6 998 aa16.11■□□□□ 0.17
FGFR1-211ENST00000425967 HSCBQ8IWL3 235 aa16.11■□□□□ 0.17
FGFR1-211ENST00000425967 HDGFL2Q7Z4V5 671 aaPredicted RBP16.11■□□□□ 0.17
FGFR1-211ENST00000425967 EIF4G1Q04637 1599 aaKnown RBP16.11■□□□□ 0.17
FGFR1-211ENST00000425967 SAFB2Q14151 953 aaKnown RBP eCLIP16.1■□□□□ 0.17
FGFR1-211ENST00000425967 CARMIL1Q5VZK9 1371 aa16.1■□□□□ 0.17
FGFR1-211ENST00000425967 GGT6Q6P531 493 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms