RNA–Protein interactions for RNA: ENST00000425793.1

NEK2P4-201, Transcript of NEK2 pseudogene 4, humanhuman

BASIC

Gene NEK2P4, Length 1,329 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2P4-201ENST00000425793 NPM1P06748 294 aaKnown RBP eCLIP11.94□□□□□ -0.5
NEK2P4-201ENST00000425793 SUPT5HO00267 1087 aaKnown RBP11.89□□□□□ -0.51
NEK2P4-201ENST00000425793 GSE1Q14687 1217 aa11.88□□□□□ -0.51
NEK2P4-201ENST00000425793 TRIM41Q8WV44 630 aa11.87□□□□□ -0.51
NEK2P4-201ENST00000425793 ABCC9O60706 1549 aa11.87□□□□□ -0.51
NEK2P4-201ENST00000425793 NACADO15069 1562 aa11.86□□□□□ -0.51
NEK2P4-201ENST00000425793 DCAF8Q5TAQ9 597 aa11.85□□□□□ -0.51
NEK2P4-201ENST00000425793 RASEFQ8IZ41 740 aa11.85□□□□□ -0.51
NEK2P4-201ENST00000425793 BBXQ8WY36 941 aaPredicted RBP11.84□□□□□ -0.51
NEK2P4-201ENST00000425793 RNF25Q96BH1 459 aaPredicted RBP11.84□□□□□ -0.51
NEK2P4-201ENST00000425793 PRKAR2AP13861 404 aaKnown RBP11.83□□□□□ -0.52
NEK2P4-201ENST00000425793 CHADLQ6NUI6 762 aa11.8□□□□□ -0.52
NEK2P4-201ENST00000425793 FAM212AQ96EL1 285 aa11.79□□□□□ -0.52
NEK2P4-201ENST00000425793 SCRIBQ14160 1630 aa11.79□□□□□ -0.52
NEK2P4-201ENST00000425793 CHGAP10645 457 aaKnown RBP11.76□□□□□ -0.53
NEK2P4-201ENST00000425793 CHRM1P11229 460 aaPredicted RBP11.74□□□□□ -0.53
NEK2P4-201ENST00000425793 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.74□□□□□ -0.53
NEK2P4-201ENST00000425793 HAP1P54257 671 aaPredicted RBP11.73□□□□□ -0.53
NEK2P4-201ENST00000425793 FARP1Q9Y4F1 1045 aaPredicted RBP11.72□□□□□ -0.53
NEK2P4-201ENST00000425793 HS6ST3Q8IZP7 471 aa11.71□□□□□ -0.53
NEK2P4-201ENST00000425793 RIOK3O14730 519 aaKnown RBP11.7□□□□□ -0.54
NEK2P4-201ENST00000425793 PAXIP1Q6ZW49 1069 aaPredicted RBP11.7□□□□□ -0.54
NEK2P4-201ENST00000425793 RB1CC1Q8TDY2 1594 aa11.68□□□□□ -0.54
NEK2P4-201ENST00000425793 HAX1O00165 279 aa11.67□□□□□ -0.54
NEK2P4-201ENST00000425793 PYGBP11216 843 aa11.66□□□□□ -0.54
NEK2P4-201ENST00000425793 CFAP44Q96MT7 982 aa11.66□□□□□ -0.54
NEK2P4-201ENST00000425793 DNAJC5Q9H3Z4 198 aa11.66□□□□□ -0.54
NEK2P4-201ENST00000425793 SPRYD3Q8NCJ5 442 aa11.64□□□□□ -0.55
NEK2P4-201ENST00000425793 TSPYL2Q9H2G4 693 aaPredicted RBP11.62□□□□□ -0.55
NEK2P4-201ENST00000425793 VGFO15240 615 aaPredicted RBP11.61□□□□□ -0.55
NEK2P4-201ENST00000425793 RSF1Q96T23 1441 aaPredicted RBP11.61□□□□□ -0.55
NEK2P4-201ENST00000425793 NKX1-1Q15270 411 aaPredicted RBP11.6□□□□□ -0.55
NEK2P4-201ENST00000425793 VSIG10Q8N0Z9 540 aa11.6□□□□□ -0.55
NEK2P4-201ENST00000425793 SGIP1Q9BQI5 828 aa11.6□□□□□ -0.55
NEK2P4-201ENST00000425793 TAOK2Q9UL54 1235 aa11.6□□□□□ -0.55
NEK2P4-201ENST00000425793 KDM2AQ9Y2K7 1162 aa11.59□□□□□ -0.55
NEK2P4-201ENST00000425793 C19orf67A6NJJ6 358 aa11.58□□□□□ -0.56
NEK2P4-201ENST00000425793 CCDC61Q9Y6R9 512 aa11.57□□□□□ -0.56
NEK2P4-201ENST00000425793 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.56□□□□□ -0.56
NEK2P4-201ENST00000425793 STK25O00506 426 aa11.56□□□□□ -0.56
NEK2P4-201ENST00000425793 ZFP91Q96JP5 570 aaPredicted RBP11.56□□□□□ -0.56
NEK2P4-201ENST00000425793 TSHZ2Q9NRE2 1034 aa11.56□□□□□ -0.56
NEK2P4-201ENST00000425793 EVX2Q03828 476 aa11.53□□□□□ -0.56
NEK2P4-201ENST00000425793 SP7Q8TDD2 431 aaPredicted RBP11.52□□□□□ -0.57
NEK2P4-201ENST00000425793 BCL11BQ9C0K0 894 aaPredicted RBP11.52□□□□□ -0.57
NEK2P4-201ENST00000425793 GTPBP6O43824 516 aaPredicted RBP11.51□□□□□ -0.57
NEK2P4-201ENST00000425793 STK24Q9Y6E0 443 aa11.49□□□□□ -0.57
NEK2P4-201ENST00000425793 CECR2Q9BXF3 1484 aa11.49□□□□□ -0.57
NEK2P4-201ENST00000425793 PCDHB8Q9UN66 801 aa11.48□□□□□ -0.57
NEK2P4-201ENST00000425793 PCDHB13Q9Y5F0 798 aa11.48□□□□□ -0.57
NEK2P4-201ENST00000425793 CD44P16070 742 aaKnown RBP11.47□□□□□ -0.57
NEK2P4-201ENST00000425793 ZNF467Q7Z7K2 595 aaPredicted RBP11.47□□□□□ -0.57
NEK2P4-201ENST00000425793 MROH2BQ7Z745 1585 aa11.45□□□□□ -0.58
NEK2P4-201ENST00000425793 ZNF579Q8NAF0 562 aaKnown RBP11.43□□□□□ -0.58
NEK2P4-201ENST00000425793 PDAP1Q13442 181 aaKnown RBP11.42□□□□□ -0.58
NEK2P4-201ENST00000425793 KIF12Q96FN5 646 aa11.42□□□□□ -0.58
NEK2P4-201ENST00000425793 BAZ1AQ9NRL2 1556 aaPredicted RBP11.41□□□□□ -0.58
NEK2P4-201ENST00000425793 MAP3K13O43283 966 aa11.4□□□□□ -0.58
NEK2P4-201ENST00000425793 PAK3O75914 559 aaPredicted RBP11.4□□□□□ -0.58
NEK2P4-201ENST00000425793 IFNL1Q8IU54 200 aa11.39□□□□□ -0.59
NEK2P4-201ENST00000425793 PSEN1P49768 467 aa11.37□□□□□ -0.59
NEK2P4-201ENST00000425793 ZRANB1Q9UGI0 708 aa11.36□□□□□ -0.59
NEK2P4-201ENST00000425793 UNC13AQ9UPW8 1703 aa11.35□□□□□ -0.59
NEK2P4-201ENST00000425793 BCANQ96GW7 911 aa11.34□□□□□ -0.59
NEK2P4-201ENST00000425793 BICRAQ9NZM4 1560 aa11.33□□□□□ -0.6
NEK2P4-201ENST00000425793 PHF12Q96QT6 1004 aa11.33□□□□□ -0.6
NEK2P4-201ENST00000425793 WIZO95785 1651 aa11.32□□□□□ -0.6
NEK2P4-201ENST00000425793 SMARCA4P51532 1647 aa11.32□□□□□ -0.6
NEK2P4-201ENST00000425793 GABBR2O75899 941 aa11.32□□□□□ -0.6
NEK2P4-201ENST00000425793 RYDENQ9NUL5 291 aaKnown RBP11.31□□□□□ -0.6
NEK2P4-201ENST00000425793 CLCN6P51797 869 aa11.3□□□□□ -0.6
NEK2P4-201ENST00000425793 MFRPQ9BY79 579 aa11.29□□□□□ -0.6
NEK2P4-201ENST00000425793 TOP2AP11388 1531 aaKnown RBP11.27□□□□□ -0.61
NEK2P4-201ENST00000425793 EFCAB3Q8N7B9 438 aa11.24□□□□□ -0.61
NEK2P4-201ENST00000425793 CABP2Q9NPB3 220 aa11.23□□□□□ -0.61
NEK2P4-201ENST00000425793 TRPC6Q9Y210 931 aa11.23□□□□□ -0.61
NEK2P4-201ENST00000425793 FBXO22Q8NEZ5 403 aa11.21□□□□□ -0.61
NEK2P4-201ENST00000425793 CADPS2Q86UW7 1296 aa11.2□□□□□ -0.62
NEK2P4-201ENST00000425793 MS4A3Q96HJ5 214 aa11.2□□□□□ -0.62
NEK2P4-201ENST00000425793 EIF4G1Q04637 1599 aaKnown RBP11.19□□□□□ -0.62
NEK2P4-201ENST00000425793 PEG3Q9GZU2 1588 aa11.19□□□□□ -0.62
NEK2P4-201ENST00000425793 PPP1R37O75864 691 aa11.18□□□□□ -0.62
NEK2P4-201ENST00000425793 PHF8Q9UPP1 1060 aa11.18□□□□□ -0.62
NEK2P4-201ENST00000425793 SOX12O15370 315 aa11.17□□□□□ -0.62
NEK2P4-201ENST00000425793 SMARCA2P51531 1590 aa11.16□□□□□ -0.62
NEK2P4-201ENST00000425793 CCDC88BA6NC98 1476 aa11.15□□□□□ -0.62
NEK2P4-201ENST00000425793 GALR2O43603 387 aaPredicted RBP11.14□□□□□ -0.63
NEK2P4-201ENST00000425793 NLRP6P59044 892 aa11.14□□□□□ -0.63
NEK2P4-201ENST00000425793 TMEM106CQ9BVX2 250 aa11.14□□□□□ -0.63
NEK2P4-201ENST00000425793 MS4A4AQ96JQ5 239 aa11.11□□□□□ -0.63
NEK2P4-201ENST00000425793 PRKCSHP14314 528 aaPredicted RBP11.1□□□□□ -0.63
NEK2P4-201ENST00000425793 ATAD2BQ9ULI0 1458 aa11.1□□□□□ -0.63
NEK2P4-201ENST00000425793 LOC105371045A0A1W2PR82 267 aa11.09□□□□□ -0.63
NEK2P4-201ENST00000425793 DCBLD2Q96PD2 775 aa11.09□□□□□ -0.63
NEK2P4-201ENST00000425793 TTLL13PA6NNM8 815 aa11.08□□□□□ -0.64
NEK2P4-201ENST00000425793 TIE1P35590 1138 aa11.08□□□□□ -0.64
NEK2P4-201ENST00000425793 POTEIP0CG38 1075 aa11.07□□□□□ -0.64
NEK2P4-201ENST00000425793 BMP2KQ9NSY1 1161 aaPredicted RBP11.06□□□□□ -0.64
NEK2P4-201ENST00000425793 BAZ1BQ9UIG0 1483 aaKnown RBP11.05□□□□□ -0.64
NEK2P4-201ENST00000425793 NBR1Q14596 966 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms