RNA–Protein interactions for RNA: ENST00000425184.5

RBM39-210, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 526 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-210ENST00000425184 CLCN6P51797 869 aa11.62□□□□□ -0.55
RBM39-210ENST00000425184 DCAF8Q5TAQ9 597 aa11.62□□□□□ -0.55
RBM39-210ENST00000425184 PHF12Q96QT6 1004 aa11.61□□□□□ -0.55
RBM39-210ENST00000425184 CCDC61Q9Y6R9 512 aa11.61□□□□□ -0.55
RBM39-210ENST00000425184 GSE1Q14687 1217 aa11.59□□□□□ -0.55
RBM39-210ENST00000425184 GABBR2O75899 941 aa11.58□□□□□ -0.56
RBM39-210ENST00000425184 CIZ1Q9ULV3 898 aaPredicted RBP11.54□□□□□ -0.56
RBM39-210ENST00000425184 KIF12Q96FN5 646 aa11.51□□□□□ -0.57
RBM39-210ENST00000425184 MAP3K13O43283 966 aa11.47□□□□□ -0.57
RBM39-210ENST00000425184 GALR2O43603 387 aaPredicted RBP11.47□□□□□ -0.57
RBM39-210ENST00000425184 PYGBP11216 843 aa11.47□□□□□ -0.57
RBM39-210ENST00000425184 MS4A3Q96HJ5 214 aa11.46□□□□□ -0.57
RBM39-210ENST00000425184 SGIP1Q9BQI5 828 aa11.45□□□□□ -0.58
RBM39-210ENST00000425184 PCDHB13Q9Y5F0 798 aa11.44□□□□□ -0.58
RBM39-210ENST00000425184 CHRM1P11229 460 aaPredicted RBP11.43□□□□□ -0.58
RBM39-210ENST00000425184 TRIM41Q8WV44 630 aa11.43□□□□□ -0.58
RBM39-210ENST00000425184 DCBLD2Q96PD2 775 aa11.41□□□□□ -0.58
RBM39-210ENST00000425184 IFNL1Q8IU54 200 aa11.38□□□□□ -0.59
RBM39-210ENST00000425184 ZNF467Q7Z7K2 595 aaPredicted RBP11.35□□□□□ -0.59
RBM39-210ENST00000425184 PCDHB8Q9UN66 801 aa11.33□□□□□ -0.6
RBM39-210ENST00000425184 POTEIP0CG38 1075 aa11.31□□□□□ -0.6
RBM39-210ENST00000425184 TRPC6Q9Y210 931 aa11.31□□□□□ -0.6
RBM39-210ENST00000425184 ECM2O94769 699 aaPredicted RBP11.3□□□□□ -0.6
RBM39-210ENST00000425184 TIE1P35590 1138 aa11.3□□□□□ -0.6
RBM39-210ENST00000425184 PKD2Q13563 968 aa11.3□□□□□ -0.6
RBM39-210ENST00000425184 ASTLQ6HA08 431 aaPredicted RBP11.28□□□□□ -0.6
RBM39-210ENST00000425184 BMP2KQ9NSY1 1161 aaPredicted RBP11.28□□□□□ -0.6
RBM39-210ENST00000425184 ATMINO43313 823 aaPredicted RBP11.27□□□□□ -0.61
RBM39-210ENST00000425184 TTLL13PA6NNM8 815 aa11.24□□□□□ -0.61
RBM39-210ENST00000425184 RIOK3O14730 519 aaKnown RBP11.24□□□□□ -0.61
RBM39-210ENST00000425184 TMEM106CQ9BVX2 250 aa11.24□□□□□ -0.61
RBM39-210ENST00000425184 PDAP1Q13442 181 aaKnown RBP11.23□□□□□ -0.61
RBM39-210ENST00000425184 ATN1P54259 1190 aaPredicted RBP11.22□□□□□ -0.61
RBM39-210ENST00000425184 RNF25Q96BH1 459 aaPredicted RBP11.22□□□□□ -0.61
RBM39-210ENST00000425184 PSEN1P49768 467 aa11.21□□□□□ -0.61
RBM39-210ENST00000425184 PELP1Q8IZL8 1130 aaKnown RBP11.2□□□□□ -0.62
RBM39-210ENST00000425184 TAOK2Q9UL54 1235 aa11.18□□□□□ -0.62
RBM39-210ENST00000425184 RGL2O15211 777 aa11.17□□□□□ -0.62
RBM39-210ENST00000425184 VGFO15240 615 aaPredicted RBP11.17□□□□□ -0.62
RBM39-210ENST00000425184 SLC39A7Q92504 469 aa11.17□□□□□ -0.62
RBM39-210ENST00000425184 TRIM35Q9UPQ4 493 aa11.17□□□□□ -0.62
RBM39-210ENST00000425184 C7P10643 843 aa11.15□□□□□ -0.62
RBM39-210ENST00000425184 AMER1Q5JTC6 1135 aaPredicted RBP11.14□□□□□ -0.63
RBM39-210ENST00000425184 METRNQ9UJH8 293 aa11.13□□□□□ -0.63
RBM39-210ENST00000425184 GOLGA2Q08379 1002 aa11.12□□□□□ -0.63
RBM39-210ENST00000425184 IER5LQ5T953 404 aa11.11□□□□□ -0.63
RBM39-210ENST00000425184 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.1□□□□□ -0.63
RBM39-210ENST00000425184 ZFP91Q96JP5 570 aaPredicted RBP11.1□□□□□ -0.63
RBM39-210ENST00000425184 CABP2Q9NPB3 220 aa11.08□□□□□ -0.64
RBM39-210ENST00000425184 MKRN3Q13064 507 aaKnown RBP11.07□□□□□ -0.64
RBM39-210ENST00000425184 SEC24BO95487 1268 aa11.06□□□□□ -0.64
RBM39-210ENST00000425184 RTN4Q9NQC3 1192 aaKnown RBP11.06□□□□□ -0.64
RBM39-210ENST00000425184 STK25O00506 426 aa11.04□□□□□ -0.64
RBM39-210ENST00000425184 BCL11BQ9C0K0 894 aaPredicted RBP11.04□□□□□ -0.64
RBM39-210ENST00000425184 STK24Q9Y6E0 443 aa11.02□□□□□ -0.65
RBM39-210ENST00000425184 PLCG2P16885 1265 aa11.01□□□□□ -0.65
RBM39-210ENST00000425184 IRX5P78411 483 aaPredicted RBP11.01□□□□□ -0.65
RBM39-210ENST00000425184 LHX8Q68G74 356 aa11.01□□□□□ -0.65
RBM39-210ENST00000425184 COLQQ9Y215 455 aaPredicted RBP11.01□□□□□ -0.65
RBM39-210ENST00000425184 POTEFA5A3E0 1075 aa10.99□□□□□ -0.65
RBM39-210ENST00000425184 EFCAB3Q8N7B9 438 aa10.99□□□□□ -0.65
RBM39-210ENST00000425184 OCEL1Q9H607 264 aa10.99□□□□□ -0.65
RBM39-210ENST00000425184 DCAF8L2P0C7V8 631 aa10.98□□□□□ -0.65
RBM39-210ENST00000425184 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.98□□□□□ -0.658e-26■■■□□ 15
RBM39-210ENST00000425184 HS6ST3Q8IZP7 471 aa10.96□□□□□ -0.65
RBM39-210ENST00000425184 POTEB2H3BUK9 544 aa10.95□□□□□ -0.66
RBM39-210ENST00000425184 CHGAP10645 457 aaKnown RBP10.95□□□□□ -0.66
RBM39-210ENST00000425184 SOX12O15370 315 aa10.94□□□□□ -0.66
RBM39-210ENST00000425184 PDCD7Q8N8D1 485 aaKnown RBP10.93□□□□□ -0.66
RBM39-210ENST00000425184 ILDR1Q86SU0 546 aaPredicted RBP10.92□□□□□ -0.66
RBM39-210ENST00000425184 MAMSTRQ6ZN01 415 aa10.89□□□□□ -0.67
RBM39-210ENST00000425184 PHF8Q9UPP1 1060 aa10.88□□□□□ -0.67
RBM39-210ENST00000425184 POTEJP0CG39 1038 aa10.87□□□□□ -0.67
RBM39-210ENST00000425184 NLRP6P59044 892 aa10.87□□□□□ -0.67
RBM39-210ENST00000425184 L3MBTL3Q96JM7 780 aaPredicted RBP10.86□□□□□ -0.67
RBM39-210ENST00000425184 MFRPQ9BY79 579 aa10.85□□□□□ -0.67
RBM39-210ENST00000425184 SCUBE2Q9NQ36 999 aa10.85□□□□□ -0.67
RBM39-210ENST00000425184 DPY19L2Q6NUT2 758 aa10.83□□□□□ -0.68
RBM39-210ENST00000425184 DNAJC5Q9H3Z4 198 aa10.83□□□□□ -0.68
RBM39-210ENST00000425184 G3V3G9 751 aa10.82□□□□□ -0.68
RBM39-210ENST00000425184 FBXO22Q8NEZ5 403 aa10.82□□□□□ -0.68
RBM39-210ENST00000425184 OTUD5Q96G74 571 aa10.82□□□□□ -0.68
RBM39-210ENST00000425184 MS4A4AQ96JQ5 239 aa10.82□□□□□ -0.68
RBM39-210ENST00000425184 BOLA1Q9Y3E2 137 aa10.8□□□□□ -0.68
RBM39-210ENST00000425184 NKX1-1Q15270 411 aaPredicted RBP10.77□□□□□ -0.69
RBM39-210ENST00000425184 C3orf67Q6ZVT6 689 aa10.77□□□□□ -0.69
RBM39-210ENST00000425184 RYDENQ9NUL5 291 aaKnown RBP10.76□□□□□ -0.69
RBM39-210ENST00000425184 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.76□□□□□ -0.69
RBM39-210ENST00000425184 TMEM121BQ9BXQ6 578 aaPredicted RBP10.74□□□□□ -0.69
RBM39-210ENST00000425184 MICALL2Q8IY33 904 aa10.72□□□□□ -0.69
RBM39-210ENST00000425184 SLAIN1Q8ND83 568 aa10.71□□□□□ -0.69
RBM39-210ENST00000425184 BBXQ8WY36 941 aaPredicted RBP10.71□□□□□ -0.69
RBM39-210ENST00000425184 PPP1R37O75864 691 aa10.67□□□□□ -0.7
RBM39-210ENST00000425184 GTPBP6O43824 516 aaPredicted RBP10.66□□□□□ -0.7
RBM39-210ENST00000425184 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.66□□□□□ -0.7
RBM39-210ENST00000425184 SPRYD3Q8NCJ5 442 aa10.58□□□□□ -0.72
RBM39-210ENST00000425184 SNPHO15079 494 aa10.57□□□□□ -0.72
RBM39-210ENST00000425184 TMEM92Q6UXU6 159 aa10.57□□□□□ -0.72
RBM39-210ENST00000425184 TMC2Q8TDI7 906 aa10.54□□□□□ -0.72
RBM39-210ENST00000425184 PAXIP1Q6ZW49 1069 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms