RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 C19orf67A6NJJ6 358 aa10.65□□□□□ -0.7
HDAC9-209ENST00000425071 CD44P16070 742 aaKnown RBP10.65□□□□□ -0.7
HDAC9-209ENST00000425071 PKD2Q13563 968 aa10.65□□□□□ -0.7
HDAC9-209ENST00000425071 TSPYL2Q9H2G4 693 aaPredicted RBP10.64□□□□□ -0.71
HDAC9-209ENST00000425071 CHRM1P11229 460 aaPredicted RBP10.63□□□□□ -0.71
HDAC9-209ENST00000425071 EVX2Q03828 476 aa10.62□□□□□ -0.71
HDAC9-209ENST00000425071 ECM2O94769 699 aaPredicted RBP10.61□□□□□ -0.71
HDAC9-209ENST00000425071 ZRANB1Q9UGI0 708 aa10.59□□□□□ -0.71
HDAC9-209ENST00000425071 CCDC61Q9Y6R9 512 aa10.59□□□□□ -0.71
HDAC9-209ENST00000425071 CLCN6P51797 869 aa10.57□□□□□ -0.72
HDAC9-209ENST00000425071 ZNF579Q8NAF0 562 aaKnown RBP10.55□□□□□ -0.72
HDAC9-209ENST00000425071 SGIP1Q9BQI5 828 aa10.54□□□□□ -0.72
HDAC9-209ENST00000425071 TAOK2Q9UL54 1235 aa10.53□□□□□ -0.72
HDAC9-209ENST00000425071 PYGBP11216 843 aa10.52□□□□□ -0.73
HDAC9-209ENST00000425071 ZNF467Q7Z7K2 595 aaPredicted RBP10.49□□□□□ -0.73
HDAC9-209ENST00000425071 KIF12Q96FN5 646 aa10.48□□□□□ -0.73
HDAC9-209ENST00000425071 RIOK3O14730 519 aaKnown RBP10.46□□□□□ -0.73
HDAC9-209ENST00000425071 RGL2O15211 777 aa10.44□□□□□ -0.74
HDAC9-209ENST00000425071 MAP3K13O43283 966 aa10.44□□□□□ -0.74
HDAC9-209ENST00000425071 PHF12Q96QT6 1004 aa10.44□□□□□ -0.74
HDAC9-209ENST00000425071 PCDHB13Q9Y5F0 798 aa10.44□□□□□ -0.74
HDAC9-209ENST00000425071 VGFO15240 615 aaPredicted RBP10.41□□□□□ -0.74
HDAC9-209ENST00000425071 RNF25Q96BH1 459 aaPredicted RBP10.41□□□□□ -0.74
HDAC9-209ENST00000425071 GABBR2O75899 941 aa10.4□□□□□ -0.74
HDAC9-209ENST00000425071 DCAF8L2P0C7V8 631 aa10.38□□□□□ -0.75
HDAC9-209ENST00000425071 IFNL1Q8IU54 200 aa10.37□□□□□ -0.75
HDAC9-209ENST00000425071 PDAP1Q13442 181 aaKnown RBP10.36□□□□□ -0.75
HDAC9-209ENST00000425071 MS4A3Q96HJ5 214 aa10.35□□□□□ -0.75
HDAC9-209ENST00000425071 PCDHB8Q9UN66 801 aa10.35□□□□□ -0.75
HDAC9-209ENST00000425071 PSEN1P49768 467 aa10.31□□□□□ -0.76
HDAC9-209ENST00000425071 TIE1P35590 1138 aa10.3□□□□□ -0.76
HDAC9-209ENST00000425071 HS6ST3Q8IZP7 471 aa10.3□□□□□ -0.76
HDAC9-209ENST00000425071 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.29□□□□□ -0.76
HDAC9-209ENST00000425071 GALR2O43603 387 aaPredicted RBP10.29□□□□□ -0.76
HDAC9-209ENST00000425071 ZFP91Q96JP5 570 aaPredicted RBP10.29□□□□□ -0.76
HDAC9-209ENST00000425071 STK25O00506 426 aa10.28□□□□□ -0.76
HDAC9-209ENST00000425071 CHGAP10645 457 aaKnown RBP10.28□□□□□ -0.76
HDAC9-209ENST00000425071 DNAJC5Q9H3Z4 198 aa10.27□□□□□ -0.77
HDAC9-209ENST00000425071 BCL11BQ9C0K0 894 aaPredicted RBP10.25□□□□□ -0.77
HDAC9-209ENST00000425071 BBXQ8WY36 941 aaPredicted RBP10.24□□□□□ -0.77
HDAC9-209ENST00000425071 TMEM106CQ9BVX2 250 aa10.23□□□□□ -0.77
HDAC9-209ENST00000425071 STK24Q9Y6E0 443 aa10.23□□□□□ -0.77
HDAC9-209ENST00000425071 DCBLD2Q96PD2 775 aa10.21□□□□□ -0.77
HDAC9-209ENST00000425071 BMP2KQ9NSY1 1161 aaPredicted RBP10.21□□□□□ -0.77
HDAC9-209ENST00000425071 TRPC6Q9Y210 931 aa10.21□□□□□ -0.77
HDAC9-209ENST00000425071 TTLL13PA6NNM8 815 aa10.2□□□□□ -0.78
HDAC9-209ENST00000425071 ASTLQ6HA08 431 aaPredicted RBP10.2□□□□□ -0.78
HDAC9-209ENST00000425071 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.2□□□□□ -0.78
HDAC9-209ENST00000425071 GOLGA2Q08379 1002 aa10.19□□□□□ -0.78
HDAC9-209ENST00000425071 RYDENQ9NUL5 291 aaKnown RBP10.18□□□□□ -0.78
HDAC9-209ENST00000425071 ATMINO43313 823 aaPredicted RBP10.17□□□□□ -0.78
HDAC9-209ENST00000425071 SOX12O15370 315 aa10.16□□□□□ -0.78
HDAC9-209ENST00000425071 POTEIP0CG38 1075 aa10.16□□□□□ -0.78
HDAC9-209ENST00000425071 CABP2Q9NPB3 220 aa10.16□□□□□ -0.78
HDAC9-209ENST00000425071 MKRN3Q13064 507 aaKnown RBP10.14□□□□□ -0.79
HDAC9-209ENST00000425071 TRIM35Q9UPQ4 493 aa10.14□□□□□ -0.79
HDAC9-209ENST00000425071 ATN1P54259 1190 aaPredicted RBP10.13□□□□□ -0.79
HDAC9-209ENST00000425071 IER5LQ5T953 404 aa10.13□□□□□ -0.79
HDAC9-209ENST00000425071 EFCAB3Q8N7B9 438 aa10.11□□□□□ -0.79
HDAC9-209ENST00000425071 NLRP6P59044 892 aa10.09□□□□□ -0.79
HDAC9-209ENST00000425071 LHX8Q68G74 356 aa10.09□□□□□ -0.79
HDAC9-209ENST00000425071 SPRYD3Q8NCJ5 442 aa10.09□□□□□ -0.79
HDAC9-209ENST00000425071 NKX1-1Q15270 411 aaPredicted RBP10.08□□□□□ -0.8
HDAC9-209ENST00000425071 C7P10643 843 aa10.07□□□□□ -0.8
HDAC9-209ENST00000425071 SLC39A7Q92504 469 aa10.07□□□□□ -0.8
HDAC9-209ENST00000425071 PLCB2Q00722 1185 aa10.05□□□□□ -0.8
HDAC9-209ENST00000425071 MFRPQ9BY79 579 aa10.05□□□□□ -0.8
HDAC9-209ENST00000425071 ILDR1Q86SU0 546 aaPredicted RBP10.04□□□□□ -0.8
HDAC9-209ENST00000425071 GTPBP6O43824 516 aaPredicted RBP10.03□□□□□ -0.8
HDAC9-209ENST00000425071 PAXIP1Q6ZW49 1069 aaPredicted RBP10.03□□□□□ -0.8
HDAC9-209ENST00000425071 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.03□□□□□ -0.8
HDAC9-209ENST00000425071 PELP1Q8IZL8 1130 aaKnown RBP10.02□□□□□ -0.81
HDAC9-209ENST00000425071 FBXO22Q8NEZ5 403 aa10.02□□□□□ -0.81
HDAC9-209ENST00000425071 OCEL1Q9H607 264 aa10.02□□□□□ -0.81
HDAC9-209ENST00000425071 IRX5P78411 483 aaPredicted RBP10.01□□□□□ -0.81
HDAC9-209ENST00000425071 PHF8Q9UPP1 1060 aa10.01□□□□□ -0.81
HDAC9-209ENST00000425071 CFAP44Q96MT7 982 aa10□□□□□ -0.81
HDAC9-209ENST00000425071 SEC24BO95487 1268 aa9.99□□□□□ -0.81
HDAC9-209ENST00000425071 PLCG2P16885 1265 aa9.98□□□□□ -0.81
HDAC9-209ENST00000425071 METRNQ9UJH8 293 aa9.98□□□□□ -0.81
HDAC9-209ENST00000425071 PDCD7Q8N8D1 485 aaKnown RBP9.95□□□□□ -0.82
HDAC9-209ENST00000425071 MS4A4AQ96JQ5 239 aa9.94□□□□□ -0.82
HDAC9-209ENST00000425071 L3MBTL3Q96JM7 780 aaPredicted RBP9.93□□□□□ -0.82
HDAC9-209ENST00000425071 G3V3G9 751 aa9.9□□□□□ -0.82
HDAC9-209ENST00000425071 COLQQ9Y215 455 aaPredicted RBP9.9□□□□□ -0.82
HDAC9-209ENST00000425071 POTEFA5A3E0 1075 aa9.88□□□□□ -0.83
HDAC9-209ENST00000425071 PPP1R37O75864 691 aa9.86□□□□□ -0.83
HDAC9-209ENST00000425071 HAP1P54257 671 aaPredicted RBP9.86□□□□□ -0.83
HDAC9-209ENST00000425071 BOLA1Q9Y3E2 137 aa9.86□□□□□ -0.83
HDAC9-209ENST00000425071 DPY19L2Q6NUT2 758 aa9.85□□□□□ -0.83
HDAC9-209ENST00000425071 TMEM121BQ9BXQ6 578 aaPredicted RBP9.85□□□□□ -0.83
HDAC9-209ENST00000425071 SLC24A1O60721 1099 aa9.84□□□□□ -0.83
HDAC9-209ENST00000425071 POTEB2H3BUK9 544 aa9.83□□□□□ -0.84
HDAC9-209ENST00000425071 MICALL2Q8IY33 904 aa9.83□□□□□ -0.84
HDAC9-209ENST00000425071 MAMSTRQ6ZN01 415 aa9.8□□□□□ -0.84
HDAC9-209ENST00000425071 VSIG10Q8N0Z9 540 aa9.8□□□□□ -0.84
HDAC9-209ENST00000425071 TSHZ2Q9NRE2 1034 aa9.8□□□□□ -0.84
HDAC9-209ENST00000425071 OTUD5Q96G74 571 aa9.79□□□□□ -0.84
HDAC9-209ENST00000425071 C3orf67Q6ZVT6 689 aa9.77□□□□□ -0.85
HDAC9-209ENST00000425071 PDE4AP27815 886 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms