RNA–Protein interactions for RNA: ENST00000424867.1

PBRM1-212, Transcript of polybromo 1, humanhuman

TSL 5

Gene PBRM1, Length 457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-212ENST00000424867 METRNQ9UJH8 293 aa16.34■□□□□ 0.21
PBRM1-212ENST00000424867 SLC39A7Q92504 469 aa16.31■□□□□ 0.2
PBRM1-212ENST00000424867 C7P10643 843 aa16.3■□□□□ 0.2
PBRM1-212ENST00000424867 PROM2Q8N271 834 aa16.29■□□□□ 0.2
PBRM1-212ENST00000424867 POTEMA6NI47 508 aa16.27■□□□□ 0.2
PBRM1-212ENST00000424867 CCDC61Q9Y6R9 512 aa16.24■□□□□ 0.19
PBRM1-212ENST00000424867 POTEJP0CG39 1038 aa16.22■□□□□ 0.19
PBRM1-212ENST00000424867 POTEGQ6S5H5 508 aa16.22■□□□□ 0.19
PBRM1-212ENST00000424867 ATN1P54259 1190 aaPredicted RBP16.18■□□□□ 0.18
PBRM1-212ENST00000424867 MAMSTRQ6ZN01 415 aa16.18■□□□□ 0.18
PBRM1-212ENST00000424867 KIF12Q96FN5 646 aa16.18■□□□□ 0.18
PBRM1-212ENST00000424867 PLEKHG5O94827 1062 aa16.13■□□□□ 0.17
PBRM1-212ENST00000424867 MIER1Q8N108 512 aa16.13■□□□□ 0.17
PBRM1-212ENST00000424867 BMP2KQ9NSY1 1161 aaPredicted RBP16.09■□□□□ 0.17
PBRM1-212ENST00000424867 MAP3K13O43283 966 aa16.07■□□□□ 0.16
PBRM1-212ENST00000424867 SCUBE2Q9NQ36 999 aa16.07■□□□□ 0.16
PBRM1-212ENST00000424867 TRPC6Q9Y210 931 aa16.07■□□□□ 0.16
PBRM1-212ENST00000424867 RASEFQ8IZ41 740 aa16.05■□□□□ 0.16
PBRM1-212ENST00000424867 POTEFA5A3E0 1075 aa16.02■□□□□ 0.16
PBRM1-212ENST00000424867 FAM163AQ96GL9 167 aaPredicted RBP16.02■□□□□ 0.16
PBRM1-212ENST00000424867 PCDH10Q9P2E7 1040 aa16.02■□□□□ 0.16
PBRM1-212ENST00000424867 TIE1P35590 1138 aa16.01■□□□□ 0.15
PBRM1-212ENST00000424867 LCE2DQ5TA82 110 aaPredicted RBP15.95■□□□□ 0.14
PBRM1-212ENST00000424867 PLCD3Q8N3E9 789 aa15.94■□□□□ 0.14
PBRM1-212ENST00000424867 TTLL13PA6NNM8 815 aa15.92■□□□□ 0.14
PBRM1-212ENST00000424867 SEC24BO95487 1268 aa15.92■□□□□ 0.14
PBRM1-212ENST00000424867 COLQQ9Y215 455 aaPredicted RBP15.91■□□□□ 0.14
PBRM1-212ENST00000424867 PCDHB13Q9Y5F0 798 aa15.86■□□□□ 0.13
PBRM1-212ENST00000424867 SGIP1Q9BQI5 828 aa15.85■□□□□ 0.13
PBRM1-212ENST00000424867 TRIM35Q9UPQ4 493 aa15.83■□□□□ 0.12
PBRM1-212ENST00000424867 ZBTB47Q9UFB7 747 aaPredicted RBP15.82■□□□□ 0.12
PBRM1-212ENST00000424867 NUBP1P53384 320 aa15.8■□□□□ 0.12
PBRM1-212ENST00000424867 IER5LQ5T953 404 aa15.8■□□□□ 0.12
PBRM1-212ENST00000424867 IFNL1Q8IU54 200 aa15.75■□□□□ 0.11
PBRM1-212ENST00000424867 FAM212AQ96EL1 285 aa15.72■□□□□ 0.11
PBRM1-212ENST00000424867 TMEM106CQ9BVX2 250 aa15.7■□□□□ 0.1
PBRM1-212ENST00000424867 SLAIN1Q8ND83 568 aa15.66■□□□□ 0.1
PBRM1-212ENST00000424867 PLCG2P16885 1265 aa15.63■□□□□ 0.09
PBRM1-212ENST00000424867 CDAN1Q8IWY9 1227 aa15.63■□□□□ 0.09
PBRM1-212ENST00000424867 FKBP8Q14318 412 aa15.58■□□□□ 0.08
PBRM1-212ENST00000424867 ST18O60284 1047 aa15.57■□□□□ 0.08
PBRM1-212ENST00000424867 IRX5P78411 483 aaPredicted RBP15.56■□□□□ 0.08
PBRM1-212ENST00000424867 DCAF8Q5TAQ9 597 aa15.56■□□□□ 0.08
PBRM1-212ENST00000424867 PYGBP11216 843 aa15.53■□□□□ 0.08
PBRM1-212ENST00000424867 OCEL1Q9H607 264 aa15.51■□□□□ 0.07
PBRM1-212ENST00000424867 PCDHB8Q9UN66 801 aa15.47■□□□□ 0.07
PBRM1-212ENST00000424867 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.41■□□□□ 0.06
PBRM1-212ENST00000424867 SNPHO15079 494 aa15.38■□□□□ 0.05
PBRM1-212ENST00000424867 FBXO3Q9UK99 471 aa15.38■□□□□ 0.05
PBRM1-212ENST00000424867 TMEM121BQ9BXQ6 578 aaPredicted RBP15.36■□□□□ 0.05
PBRM1-212ENST00000424867 KLHL34Q8N239 644 aa15.3■□□□□ 0.04
PBRM1-212ENST00000424867 MARVELD3Q96A59 401 aa15.29■□□□□ 0.04
PBRM1-212ENST00000424867 GOLGA2Q08379 1002 aa15.28■□□□□ 0.04
PBRM1-212ENST00000424867 GSE1Q14687 1217 aa15.28■□□□□ 0.04
PBRM1-212ENST00000424867 ZNF467Q7Z7K2 595 aaPredicted RBP15.28■□□□□ 0.04
PBRM1-212ENST00000424867 PDCD7Q8N8D1 485 aaKnown RBP15.27■□□□□ 0.04
PBRM1-212ENST00000424867 MKRN3Q13064 507 aaKnown RBP15.26■□□□□ 0.03
PBRM1-212ENST00000424867 SPNS2Q8IVW8 549 aa15.25■□□□□ 0.03
PBRM1-212ENST00000424867 MMRN1Q13201 1228 aa15.24■□□□□ 0.03
PBRM1-212ENST00000424867 C3orf67Q6ZVT6 689 aa15.24■□□□□ 0.03
PBRM1-212ENST00000424867 L3MBTL3Q96JM7 780 aaPredicted RBP15.23■□□□□ 0.03
PBRM1-212ENST00000424867 VASPP50552 380 aaPredicted RBP15.2■□□□□ 0.02
PBRM1-212ENST00000424867 CHRM1P11229 460 aaPredicted RBP15.19■□□□□ 0.02
PBRM1-212ENST00000424867 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.19■□□□□ 0.022e-8■□□□□ 11.2
PBRM1-212ENST00000424867 PSEN1P49768 467 aa15.17■□□□□ 0.02
PBRM1-212ENST00000424867 EMP3P54852 163 aa15.14■□□□□ 0.01
PBRM1-212ENST00000424867 PDAP1Q13442 181 aaKnown RBP15.06■□□□□ 0
PBRM1-212ENST00000424867 DPY19L2Q6NUT2 758 aa15.05■□□□□ -0
PBRM1-212ENST00000424867 FAM205CA6NFA0 338 aa15.03■□□□□ -0
PBRM1-212ENST00000424867 ILDR1Q86SU0 546 aaPredicted RBP15.03■□□□□ -0
PBRM1-212ENST00000424867 HS3ST6Q96QI5 342 aa15.03■□□□□ -0
PBRM1-212ENST00000424867 POTEB3A0JP26 581 aa15.02■□□□□ -0
PBRM1-212ENST00000424867 POTEBQ6S5H4 581 aa15.02■□□□□ -0
PBRM1-212ENST00000424867 CABP2Q9NPB3 220 aa14.99□□□□□ -0.01
PBRM1-212ENST00000424867 G3V3G9 751 aa14.98□□□□□ -0.01
PBRM1-212ENST00000424867 KRTAP3-3Q9BYR6 98 aa14.98□□□□□ -0.01
PBRM1-212ENST00000424867 KRTAP3-2Q9BYR7 98 aa14.98□□□□□ -0.01
PBRM1-212ENST00000424867 CIZ1Q9ULV3 898 aaPredicted RBP14.98□□□□□ -0.01
PBRM1-212ENST00000424867 BOLA1Q9Y3E2 137 aa14.96□□□□□ -0.01
PBRM1-212ENST00000424867 SPOCK2Q92563 424 aa14.95□□□□□ -0.02
PBRM1-212ENST00000424867 HOXB3P14651 431 aaPredicted RBP14.9□□□□□ -0.02
PBRM1-212ENST00000424867 IFNLR1Q8IU57 520 aaPredicted RBP14.9□□□□□ -0.02
PBRM1-212ENST00000424867 ZNF710Q8N1W2 664 aa14.86□□□□□ -0.03
PBRM1-212ENST00000424867 HOXB1P14653 301 aaPredicted RBP14.82□□□□□ -0.04
PBRM1-212ENST00000424867 DOK7Q18PE1 504 aa14.81□□□□□ -0.04
PBRM1-212ENST00000424867 ERBB3P21860 1342 aa14.79□□□□□ -0.04
PBRM1-212ENST00000424867 EFCAB3Q8N7B9 438 aa14.77□□□□□ -0.05
PBRM1-212ENST00000424867 RIMBP2O15034 1052 aa14.72□□□□□ -0.05
PBRM1-212ENST00000424867 TRIM41Q8WV44 630 aa14.69□□□□□ -0.06
PBRM1-212ENST00000424867 VARS2Q5ST30 1063 aaKnown RBP14.67□□□□□ -0.06
PBRM1-212ENST00000424867 MICALL2Q8IY33 904 aa14.65□□□□□ -0.06
PBRM1-212ENST00000424867 TMEM92Q6UXU6 159 aa14.64□□□□□ -0.07
PBRM1-212ENST00000424867 RNF166Q96A37 237 aaPredicted RBP14.62□□□□□ -0.07
PBRM1-212ENST00000424867 ZSWIM6Q9HCJ5 1215 aa14.6□□□□□ -0.07
PBRM1-212ENST00000424867 SOX12O15370 315 aa14.59□□□□□ -0.07
PBRM1-212ENST00000424867 ZNF687Q8N1G0 1237 aa14.57□□□□□ -0.08
PBRM1-212ENST00000424867 MYT1LQ9UL68 1186 aa14.57□□□□□ -0.08
PBRM1-212ENST00000424867 GPR153Q6NV75 609 aa14.56□□□□□ -0.08
PBRM1-212ENST00000424867 MS4A4AQ96JQ5 239 aa14.55□□□□□ -0.08
PBRM1-212ENST00000424867 RIOK3O14730 519 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms