RNA–Protein interactions for RNA: ENST00000424555.5

SEMA3A-203, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-203ENST00000424555 POTEB2H3BUK9 544 aa14.08□□□□□ -0.16
SEMA3A-203ENST00000424555 RASEFQ8IZ41 740 aa14.08□□□□□ -0.16
SEMA3A-203ENST00000424555 KIF12Q96FN5 646 aa14.05□□□□□ -0.16
SEMA3A-203ENST00000424555 ASTLQ6HA08 431 aaPredicted RBP14.03□□□□□ -0.16
SEMA3A-203ENST00000424555 ATMINO43313 823 aaPredicted RBP14.02□□□□□ -0.17
SEMA3A-203ENST00000424555 PLEKHG5O94827 1062 aa14□□□□□ -0.17
SEMA3A-203ENST00000424555 PLCD3Q8N3E9 789 aa14□□□□□ -0.17
SEMA3A-203ENST00000424555 OTUD5Q96G74 571 aa13.98□□□□□ -0.17
SEMA3A-203ENST00000424555 TRPC6Q9Y210 931 aa13.97□□□□□ -0.17
SEMA3A-203ENST00000424555 MAP3K13O43283 966 aa13.95□□□□□ -0.18
SEMA3A-203ENST00000424555 NUBP1P53384 320 aa13.95□□□□□ -0.18
SEMA3A-203ENST00000424555 ATN1P54259 1190 aaPredicted RBP13.92□□□□□ -0.18
SEMA3A-203ENST00000424555 POTEJP0CG39 1038 aa13.91□□□□□ -0.18
SEMA3A-203ENST00000424555 METRNQ9UJH8 293 aa13.91□□□□□ -0.18
SEMA3A-203ENST00000424555 BMP2KQ9NSY1 1161 aaPredicted RBP13.89□□□□□ -0.19
SEMA3A-203ENST00000424555 C7P10643 843 aa13.88□□□□□ -0.19
SEMA3A-203ENST00000424555 SLC39A7Q92504 469 aa13.88□□□□□ -0.19
SEMA3A-203ENST00000424555 ZBTB47Q9UFB7 747 aaPredicted RBP13.83□□□□□ -0.2
SEMA3A-203ENST00000424555 POTEFA5A3E0 1075 aa13.82□□□□□ -0.2
SEMA3A-203ENST00000424555 TIE1P35590 1138 aa13.8□□□□□ -0.2
SEMA3A-203ENST00000424555 TTLL13PA6NNM8 815 aa13.77□□□□□ -0.21
SEMA3A-203ENST00000424555 SGIP1Q9BQI5 828 aa13.76□□□□□ -0.21
SEMA3A-203ENST00000424555 PCDHB13Q9Y5F0 798 aa13.76□□□□□ -0.21
SEMA3A-203ENST00000424555 IFNL1Q8IU54 200 aa13.74□□□□□ -0.21
SEMA3A-203ENST00000424555 FAM212AQ96EL1 285 aa13.73□□□□□ -0.21
SEMA3A-203ENST00000424555 FBXO3Q9UK99 471 aa13.73□□□□□ -0.21
SEMA3A-203ENST00000424555 COLQQ9Y215 455 aaPredicted RBP13.71□□□□□ -0.21
SEMA3A-203ENST00000424555 TRIM35Q9UPQ4 493 aa13.66□□□□□ -0.22
SEMA3A-203ENST00000424555 VASPP50552 380 aaPredicted RBP13.65□□□□□ -0.22
SEMA3A-203ENST00000424555 DCAF8Q5TAQ9 597 aa13.65□□□□□ -0.22
SEMA3A-203ENST00000424555 MAMSTRQ6ZN01 415 aa13.63□□□□□ -0.23
SEMA3A-203ENST00000424555 PYGBP11216 843 aa13.62□□□□□ -0.23
SEMA3A-203ENST00000424555 TMEM106CQ9BVX2 250 aa13.6□□□□□ -0.23
SEMA3A-203ENST00000424555 IER5LQ5T953 404 aa13.58□□□□□ -0.24
SEMA3A-203ENST00000424555 SEC24BO95487 1268 aa13.57□□□□□ -0.24
SEMA3A-203ENST00000424555 PCDHB8Q9UN66 801 aa13.56□□□□□ -0.24
SEMA3A-203ENST00000424555 LCE2DQ5TA82 110 aaPredicted RBP13.55□□□□□ -0.24
SEMA3A-203ENST00000424555 KLHL34Q8N239 644 aa13.55□□□□□ -0.24
SEMA3A-203ENST00000424555 SCUBE2Q9NQ36 999 aa13.55□□□□□ -0.24
SEMA3A-203ENST00000424555 POTEMA6NI47 508 aa13.53□□□□□ -0.24
SEMA3A-203ENST00000424555 POTEGQ6S5H5 508 aa13.51□□□□□ -0.25
SEMA3A-203ENST00000424555 IRX5P78411 483 aaPredicted RBP13.48□□□□□ -0.25
SEMA3A-203ENST00000424555 IFNLR1Q8IU57 520 aaPredicted RBP13.47□□□□□ -0.25
SEMA3A-203ENST00000424555 FAM163AQ96GL9 167 aaPredicted RBP13.46□□□□□ -0.25
SEMA3A-203ENST00000424555 GSE1Q14687 1217 aa13.45□□□□□ -0.26
SEMA3A-203ENST00000424555 CHRM1P11229 460 aaPredicted RBP13.43□□□□□ -0.26
SEMA3A-203ENST00000424555 PLSCR2Q9NRY7 297 aa13.42□□□□□ -0.26
SEMA3A-203ENST00000424555 PLCG2P16885 1265 aa13.41□□□□□ -0.26
SEMA3A-203ENST00000424555 OCEL1Q9H607 264 aa13.38□□□□□ -0.27
SEMA3A-203ENST00000424555 ZNF467Q7Z7K2 595 aaPredicted RBP13.35□□□□□ -0.27
SEMA3A-203ENST00000424555 SPOCK2Q92563 424 aa13.35□□□□□ -0.27
SEMA3A-203ENST00000424555 SLAIN1Q8ND83 568 aa13.33□□□□□ -0.28
SEMA3A-203ENST00000424555 PSEN1P49768 467 aa13.3□□□□□ -0.28
SEMA3A-203ENST00000424555 PDCD7Q8N8D1 485 aaKnown RBP13.3□□□□□ -0.28
SEMA3A-203ENST00000424555 CIZ1Q9ULV3 898 aaPredicted RBP13.28□□□□□ -0.28
SEMA3A-203ENST00000424555 PCDH10Q9P2E7 1040 aa13.26□□□□□ -0.29
SEMA3A-203ENST00000424555 ST18O60284 1047 aa13.22□□□□□ -0.29
SEMA3A-203ENST00000424555 PDAP1Q13442 181 aaKnown RBP13.22□□□□□ -0.29
SEMA3A-203ENST00000424555 MKRN3Q13064 507 aaKnown RBP13.21□□□□□ -0.29
SEMA3A-203ENST00000424555 ILDR1Q86SU0 546 aaPredicted RBP13.2□□□□□ -0.3
SEMA3A-203ENST00000424555 GOLGA2Q08379 1002 aa13.18□□□□□ -0.3
SEMA3A-203ENST00000424555 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.18□□□□□ -0.3
SEMA3A-203ENST00000424555 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.17□□□□□ -0.3
SEMA3A-203ENST00000424555 DPY19L2Q6NUT2 758 aa13.15□□□□□ -0.3
SEMA3A-203ENST00000424555 CABP2Q9NPB3 220 aa13.13□□□□□ -0.31
SEMA3A-203ENST00000424555 L3MBTL3Q96JM7 780 aaPredicted RBP13.11□□□□□ -0.31
SEMA3A-203ENST00000424555 CDAN1Q8IWY9 1227 aa13.1□□□□□ -0.31
SEMA3A-203ENST00000424555 C3orf67Q6ZVT6 689 aa13.05□□□□□ -0.32
SEMA3A-203ENST00000424555 TRIM41Q8WV44 630 aa13.04□□□□□ -0.32
SEMA3A-203ENST00000424555 SNPHO15079 494 aa13.03□□□□□ -0.32
SEMA3A-203ENST00000424555 RNF25Q96BH1 459 aaPredicted RBP13.03□□□□□ -0.32
SEMA3A-203ENST00000424555 EFCAB3Q8N7B9 438 aa13□□□□□ -0.33
SEMA3A-203ENST00000424555 MARVELD3Q96A59 401 aa13□□□□□ -0.33
SEMA3A-203ENST00000424555 TMEM121BQ9BXQ6 578 aaPredicted RBP13□□□□□ -0.33
SEMA3A-203ENST00000424555 BOLA1Q9Y3E2 137 aa12.99□□□□□ -0.33
SEMA3A-203ENST00000424555 RIOK3O14730 519 aaKnown RBP12.94□□□□□ -0.34
SEMA3A-203ENST00000424555 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.91□□□□□ -0.34
SEMA3A-203ENST00000424555 ZFP91Q96JP5 570 aaPredicted RBP12.91□□□□□ -0.34
SEMA3A-203ENST00000424555 POTEB3A0JP26 581 aa12.9□□□□□ -0.34
SEMA3A-203ENST00000424555 POTEBQ6S5H4 581 aa12.9□□□□□ -0.34
SEMA3A-203ENST00000424555 HOXB3P14651 431 aaPredicted RBP12.89□□□□□ -0.35
SEMA3A-203ENST00000424555 MS4A4AQ96JQ5 239 aa12.88□□□□□ -0.35
SEMA3A-203ENST00000424555 G3V3G9 751 aa12.85□□□□□ -0.35
SEMA3A-203ENST00000424555 VGFO15240 615 aaPredicted RBP12.85□□□□□ -0.35
SEMA3A-203ENST00000424555 EMP3P54852 163 aa12.84□□□□□ -0.35
SEMA3A-203ENST00000424555 SOX12O15370 315 aa12.83□□□□□ -0.36
SEMA3A-203ENST00000424555 TMEM92Q6UXU6 159 aa12.83□□□□□ -0.36
SEMA3A-203ENST00000424555 PHF8Q9UPP1 1060 aa12.83□□□□□ -0.36
SEMA3A-203ENST00000424555 MICALL2Q8IY33 904 aa12.82□□□□□ -0.36
SEMA3A-203ENST00000424555 SPNS2Q8IVW8 549 aa12.81□□□□□ -0.36
SEMA3A-203ENST00000424555 FAM205CA6NFA0 338 aa12.79□□□□□ -0.36
SEMA3A-203ENST00000424555 HS3ST6Q96QI5 342 aa12.79□□□□□ -0.36
SEMA3A-203ENST00000424555 MMRN1Q13201 1228 aa12.76□□□□□ -0.37
SEMA3A-203ENST00000424555 KRTAP3-3Q9BYR6 98 aa12.76□□□□□ -0.37
SEMA3A-203ENST00000424555 KRTAP3-2Q9BYR7 98 aa12.76□□□□□ -0.37
SEMA3A-203ENST00000424555 HOXB1P14653 301 aaPredicted RBP12.74□□□□□ -0.37
SEMA3A-203ENST00000424555 BCL11BQ9C0K0 894 aaPredicted RBP12.74□□□□□ -0.37
SEMA3A-203ENST00000424555 FBXO22Q8NEZ5 403 aa12.73□□□□□ -0.37
SEMA3A-203ENST00000424555 PKD2Q13563 968 aa12.71□□□□□ -0.37
SEMA3A-203ENST00000424555 DOK7Q18PE1 504 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms