RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 PELP1Q8IZL8 1130 aaKnown RBP14.96□□□□□ -0.01
LINC00458-201ENST00000423442 PLCD3Q8N3E9 789 aa14.96□□□□□ -0.01
LINC00458-201ENST00000423442 OTUD5Q96G74 571 aa14.95□□□□□ -0.02
LINC00458-201ENST00000423442 RASEFQ8IZ41 740 aa14.94□□□□□ -0.02
LINC00458-201ENST00000423442 ASTLQ6HA08 431 aaPredicted RBP14.91□□□□□ -0.02
LINC00458-201ENST00000423442 KIF12Q96FN5 646 aa14.88□□□□□ -0.03
LINC00458-201ENST00000423442 ATMINO43313 823 aaPredicted RBP14.87□□□□□ -0.03
LINC00458-201ENST00000423442 METRNQ9UJH8 293 aa14.83□□□□□ -0.04
LINC00458-201ENST00000423442 C7P10643 843 aa14.82□□□□□ -0.04
LINC00458-201ENST00000423442 SLC39A7Q92504 469 aa14.82□□□□□ -0.04
LINC00458-201ENST00000423442 MAP3K13O43283 966 aa14.81□□□□□ -0.04
LINC00458-201ENST00000423442 TRPC6Q9Y210 931 aa14.79□□□□□ -0.04
LINC00458-201ENST00000423442 NUBP1P53384 320 aa14.78□□□□□ -0.04
LINC00458-201ENST00000423442 ZBTB47Q9UFB7 747 aaPredicted RBP14.77□□□□□ -0.05
LINC00458-201ENST00000423442 ATN1P54259 1190 aaPredicted RBP14.76□□□□□ -0.05
LINC00458-201ENST00000423442 POTEJP0CG39 1038 aa14.73□□□□□ -0.05
LINC00458-201ENST00000423442 BMP2KQ9NSY1 1161 aaPredicted RBP14.72□□□□□ -0.05
LINC00458-201ENST00000423442 MAMSTRQ6ZN01 415 aa14.66□□□□□ -0.06
LINC00458-201ENST00000423442 FBXO3Q9UK99 471 aa14.66□□□□□ -0.06
LINC00458-201ENST00000423442 TIE1P35590 1138 aa14.65□□□□□ -0.06
LINC00458-201ENST00000423442 PLSCR2Q9NRY7 297 aa14.65□□□□□ -0.06
LINC00458-201ENST00000423442 PCDHB13Q9Y5F0 798 aa14.65□□□□□ -0.06
LINC00458-201ENST00000423442 FAM212AQ96EL1 285 aa14.64□□□□□ -0.07
LINC00458-201ENST00000423442 TTLL13PA6NNM8 815 aa14.61□□□□□ -0.07
LINC00458-201ENST00000423442 POTEMA6NI47 508 aa14.6□□□□□ -0.07
LINC00458-201ENST00000423442 SGIP1Q9BQI5 828 aa14.6□□□□□ -0.07
LINC00458-201ENST00000423442 POTEFA5A3E0 1075 aa14.59□□□□□ -0.07
LINC00458-201ENST00000423442 IFNL1Q8IU54 200 aa14.58□□□□□ -0.08
LINC00458-201ENST00000423442 POTEGQ6S5H5 508 aa14.57□□□□□ -0.08
LINC00458-201ENST00000423442 DCAF8Q5TAQ9 597 aa14.56□□□□□ -0.08
LINC00458-201ENST00000423442 SCUBE2Q9NQ36 999 aa14.55□□□□□ -0.08
LINC00458-201ENST00000423442 VASPP50552 380 aaPredicted RBP14.54□□□□□ -0.08
LINC00458-201ENST00000423442 TRIM35Q9UPQ4 493 aa14.52□□□□□ -0.09
LINC00458-201ENST00000423442 PYGBP11216 843 aa14.51□□□□□ -0.09
LINC00458-201ENST00000423442 COLQQ9Y215 455 aaPredicted RBP14.51□□□□□ -0.09
LINC00458-201ENST00000423442 KLHL34Q8N239 644 aa14.5□□□□□ -0.09
LINC00458-201ENST00000423442 TMEM106CQ9BVX2 250 aa14.47□□□□□ -0.09
LINC00458-201ENST00000423442 SEC24BO95487 1268 aa14.46□□□□□ -0.09
LINC00458-201ENST00000423442 IER5LQ5T953 404 aa14.44□□□□□ -0.1
LINC00458-201ENST00000423442 LCE2DQ5TA82 110 aaPredicted RBP14.43□□□□□ -0.1
LINC00458-201ENST00000423442 PCDH10Q9P2E7 1040 aa14.43□□□□□ -0.1
LINC00458-201ENST00000423442 FAM163AQ96GL9 167 aaPredicted RBP14.42□□□□□ -0.1
LINC00458-201ENST00000423442 PCDHB8Q9UN66 801 aa14.41□□□□□ -0.1
LINC00458-201ENST00000423442 GSE1Q14687 1217 aa14.34□□□□□ -0.11
LINC00458-201ENST00000423442 IFNLR1Q8IU57 520 aaPredicted RBP14.31□□□□□ -0.12
LINC00458-201ENST00000423442 PLCG2P16885 1265 aa14.29□□□□□ -0.12
LINC00458-201ENST00000423442 IRX5P78411 483 aaPredicted RBP14.28□□□□□ -0.12
LINC00458-201ENST00000423442 CHRM1P11229 460 aaPredicted RBP14.23□□□□□ -0.13
LINC00458-201ENST00000423442 ZNF467Q7Z7K2 595 aaPredicted RBP14.23□□□□□ -0.13
LINC00458-201ENST00000423442 SPOCK2Q92563 424 aa14.23□□□□□ -0.13
LINC00458-201ENST00000423442 OCEL1Q9H607 264 aa14.21□□□□□ -0.13
LINC00458-201ENST00000423442 SLAIN1Q8ND83 568 aa14.2□□□□□ -0.14
LINC00458-201ENST00000423442 CIZ1Q9ULV3 898 aaPredicted RBP14.2□□□□□ -0.14
LINC00458-201ENST00000423442 PSEN1P49768 467 aa14.15□□□□□ -0.14
LINC00458-201ENST00000423442 ST18O60284 1047 aa14.1□□□□□ -0.15
LINC00458-201ENST00000423442 GOLGA2Q08379 1002 aa14.1□□□□□ -0.15
LINC00458-201ENST00000423442 MKRN3Q13064 507 aaKnown RBP14.09□□□□□ -0.15
LINC00458-201ENST00000423442 PDCD7Q8N8D1 485 aaKnown RBP14.09□□□□□ -0.15
LINC00458-201ENST00000423442 CDAN1Q8IWY9 1227 aa14.08□□□□□ -0.16
LINC00458-201ENST00000423442 PDAP1Q13442 181 aaKnown RBP14.07□□□□□ -0.16
LINC00458-201ENST00000423442 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.04□□□□□ -0.16
LINC00458-201ENST00000423442 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.03□□□□□ -0.16
LINC00458-201ENST00000423442 CABP2Q9NPB3 220 aa13.99□□□□□ -0.17
LINC00458-201ENST00000423442 SNPHO15079 494 aa13.97□□□□□ -0.17
LINC00458-201ENST00000423442 TMEM121BQ9BXQ6 578 aaPredicted RBP13.96□□□□□ -0.17
LINC00458-201ENST00000423442 DPY19L2Q6NUT2 758 aa13.95□□□□□ -0.18
LINC00458-201ENST00000423442 L3MBTL3Q96JM7 780 aaPredicted RBP13.95□□□□□ -0.18
LINC00458-201ENST00000423442 ILDR1Q86SU0 546 aaPredicted RBP13.94□□□□□ -0.18
LINC00458-201ENST00000423442 C3orf67Q6ZVT6 689 aa13.93□□□□□ -0.18
LINC00458-201ENST00000423442 TRIM41Q8WV44 630 aa13.9□□□□□ -0.18
LINC00458-201ENST00000423442 EFCAB3Q8N7B9 438 aa13.83□□□□□ -0.2
LINC00458-201ENST00000423442 MARVELD3Q96A59 401 aa13.83□□□□□ -0.2
LINC00458-201ENST00000423442 RNF25Q96BH1 459 aaPredicted RBP13.83□□□□□ -0.2
LINC00458-201ENST00000423442 BOLA1Q9Y3E2 137 aa13.81□□□□□ -0.2
LINC00458-201ENST00000423442 RIOK3O14730 519 aaKnown RBP13.79□□□□□ -0.2
LINC00458-201ENST00000423442 G3V3G9 751 aa13.77□□□□□ -0.21
LINC00458-201ENST00000423442 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.75□□□□□ -0.21
LINC00458-201ENST00000423442 SPNS2Q8IVW8 549 aa13.75□□□□□ -0.21
LINC00458-201ENST00000423442 ZFP91Q96JP5 570 aaPredicted RBP13.75□□□□□ -0.21
LINC00458-201ENST00000423442 MMRN1Q13201 1228 aa13.72□□□□□ -0.21
LINC00458-201ENST00000423442 EMP3P54852 163 aa13.71□□□□□ -0.21
LINC00458-201ENST00000423442 VGFO15240 615 aaPredicted RBP13.7□□□□□ -0.22
LINC00458-201ENST00000423442 MS4A4AQ96JQ5 239 aa13.65□□□□□ -0.22
LINC00458-201ENST00000423442 PHF8Q9UPP1 1060 aa13.65□□□□□ -0.22
LINC00458-201ENST00000423442 POTEB3A0JP26 581 aa13.64□□□□□ -0.23
LINC00458-201ENST00000423442 SOX12O15370 315 aa13.64□□□□□ -0.23
LINC00458-201ENST00000423442 HOXB3P14651 431 aaPredicted RBP13.64□□□□□ -0.23
LINC00458-201ENST00000423442 POTEBQ6S5H4 581 aa13.64□□□□□ -0.23
LINC00458-201ENST00000423442 HS3ST6Q96QI5 342 aa13.63□□□□□ -0.23
LINC00458-201ENST00000423442 MICALL2Q8IY33 904 aa13.62□□□□□ -0.23
LINC00458-201ENST00000423442 FAM205CA6NFA0 338 aa13.61□□□□□ -0.23
LINC00458-201ENST00000423442 NISCHQ9Y2I1 1504 aa13.59□□□□□ -0.23
LINC00458-201ENST00000423442 TMEM92Q6UXU6 159 aa13.59□□□□□ -0.23
LINC00458-201ENST00000423442 KRTAP3-3Q9BYR6 98 aa13.59□□□□□ -0.23
LINC00458-201ENST00000423442 KRTAP3-2Q9BYR7 98 aa13.59□□□□□ -0.23
LINC00458-201ENST00000423442 BCL11BQ9C0K0 894 aaPredicted RBP13.58□□□□□ -0.24
LINC00458-201ENST00000423442 ECM2O94769 699 aaPredicted RBP13.55□□□□□ -0.24
LINC00458-201ENST00000423442 STK24Q9Y6E0 443 aa13.55□□□□□ -0.24
LINC00458-201ENST00000423442 ZNF710Q8N1W2 664 aa13.54□□□□□ -0.24
LINC00458-201ENST00000423442 HOXB1P14653 301 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms