RNA–Protein interactions for RNA: ENST00000423105.5

NIFK-202, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 3

Gene NIFK, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-202ENST00000423105 FAM163AQ96GL9 167 aaPredicted RBP12.67□□□□□ -0.38
NIFK-202ENST00000423105 ATMINO43313 823 aaPredicted RBP12.65□□□□□ -0.38
NIFK-202ENST00000423105 SLC39A7Q92504 469 aa12.62□□□□□ -0.39
NIFK-202ENST00000423105 MS4A3Q96HJ5 214 aa12.62□□□□□ -0.39
NIFK-202ENST00000423105 PROM2Q8N271 834 aa12.61□□□□□ -0.39
NIFK-202ENST00000423105 C7P10643 843 aa12.6□□□□□ -0.39
NIFK-202ENST00000423105 PAK3O75914 559 aaPredicted RBP12.59□□□□□ -0.39
NIFK-202ENST00000423105 MNX1P50219 401 aaPredicted RBP12.58□□□□□ -0.4
NIFK-202ENST00000423105 MAMSTRQ6ZN01 415 aa12.56□□□□□ -0.4
NIFK-202ENST00000423105 POTEFA5A3E0 1075 aa12.54□□□□□ -0.4
NIFK-202ENST00000423105 STAG3Q9UJ98 1225 aa12.51□□□□□ -0.41
NIFK-202ENST00000423105 ATN1P54259 1190 aaPredicted RBP12.49□□□□□ -0.41
NIFK-202ENST00000423105 SCUBE2Q9NQ36 999 aa12.49□□□□□ -0.41
NIFK-202ENST00000423105 CDAN1Q8IWY9 1227 aa12.48□□□□□ -0.41
NIFK-202ENST00000423105 FBXO3Q9UK99 471 aa12.43□□□□□ -0.42
NIFK-202ENST00000423105 NPM1P06748 294 aaKnown RBP eCLIP12.42□□□□□ -0.42
NIFK-202ENST00000423105 TRPC6Q9Y210 931 aa12.38□□□□□ -0.43
NIFK-202ENST00000423105 BMP2KQ9NSY1 1161 aaPredicted RBP12.35□□□□□ -0.43
NIFK-202ENST00000423105 CCDC61Q9Y6R9 512 aa12.32□□□□□ -0.44
NIFK-202ENST00000423105 COLQQ9Y215 455 aaPredicted RBP12.31□□□□□ -0.44
NIFK-202ENST00000423105 TSPYL2Q9H2G4 693 aaPredicted RBP12.29□□□□□ -0.44
NIFK-202ENST00000423105 KIF12Q96FN5 646 aa12.28□□□□□ -0.44
NIFK-202ENST00000423105 MMRN1Q13201 1228 aa12.27□□□□□ -0.45
NIFK-202ENST00000423105 ST18O60284 1047 aa12.25□□□□□ -0.45
NIFK-202ENST00000423105 SPNS2Q8IVW8 549 aa12.21□□□□□ -0.45
NIFK-202ENST00000423105 PLEKHG5O94827 1062 aa12.19□□□□□ -0.46
NIFK-202ENST00000423105 TIE1P35590 1138 aa12.19□□□□□ -0.46
NIFK-202ENST00000423105 MIER1Q8N108 512 aa12.18□□□□□ -0.46
NIFK-202ENST00000423105 MAP3K13O43283 966 aa12.17□□□□□ -0.46
NIFK-202ENST00000423105 VASPP50552 380 aaPredicted RBP12.17□□□□□ -0.46
NIFK-202ENST00000423105 TTLL13PA6NNM8 815 aa12.15□□□□□ -0.46
NIFK-202ENST00000423105 PLCD3Q8N3E9 789 aa12.14□□□□□ -0.47
NIFK-202ENST00000423105 SEC24BO95487 1268 aa12.12□□□□□ -0.47
NIFK-202ENST00000423105 SLAIN1Q8ND83 568 aa12.12□□□□□ -0.47
NIFK-202ENST00000423105 ZBTB47Q9UFB7 747 aaPredicted RBP12.09□□□□□ -0.47
NIFK-202ENST00000423105 TRIM35Q9UPQ4 493 aa12.06□□□□□ -0.48
NIFK-202ENST00000423105 IER5LQ5T953 404 aa12.03□□□□□ -0.48
NIFK-202ENST00000423105 RASEFQ8IZ41 740 aa12.01□□□□□ -0.49
NIFK-202ENST00000423105 IFNLR1Q8IU57 520 aaPredicted RBP12□□□□□ -0.49
NIFK-202ENST00000423105 KLHL34Q8N239 644 aa12□□□□□ -0.49
NIFK-202ENST00000423105 MARVELD3Q96A59 401 aa11.96□□□□□ -0.49
NIFK-202ENST00000423105 TMEM121BQ9BXQ6 578 aaPredicted RBP11.94□□□□□ -0.5
NIFK-202ENST00000423105 SPOCK2Q92563 424 aa11.9□□□□□ -0.5
NIFK-202ENST00000423105 IRX5P78411 483 aaPredicted RBP11.89□□□□□ -0.51
NIFK-202ENST00000423105 KRTAP3-3Q9BYR6 98 aa11.88□□□□□ -0.51
NIFK-202ENST00000423105 KRTAP3-2Q9BYR7 98 aa11.88□□□□□ -0.51
NIFK-202ENST00000423105 POTEB3A0JP26 581 aa11.87□□□□□ -0.51
NIFK-202ENST00000423105 POTEBQ6S5H4 581 aa11.87□□□□□ -0.51
NIFK-202ENST00000423105 PCDHB13Q9Y5F0 798 aa11.87□□□□□ -0.51
NIFK-202ENST00000423105 SGIP1Q9BQI5 828 aa11.86□□□□□ -0.51
NIFK-202ENST00000423105 PLCG2P16885 1265 aa11.85□□□□□ -0.51
NIFK-202ENST00000423105 NUBP1P53384 320 aa11.84□□□□□ -0.51
NIFK-202ENST00000423105 IFNL1Q8IU54 200 aa11.84□□□□□ -0.51
NIFK-202ENST00000423105 TMEM106CQ9BVX2 250 aa11.82□□□□□ -0.52
NIFK-202ENST00000423105 FAM212AQ96EL1 285 aa11.78□□□□□ -0.52
NIFK-202ENST00000423105 SNPHO15079 494 aa11.77□□□□□ -0.53
NIFK-202ENST00000423105 GSE1Q14687 1217 aa11.76□□□□□ -0.53
NIFK-202ENST00000423105 DCAF8Q5TAQ9 597 aa11.75□□□□□ -0.53
NIFK-202ENST00000423105 HS3ST6Q96QI5 342 aa11.74□□□□□ -0.53
NIFK-202ENST00000423105 OCEL1Q9H607 264 aa11.73□□□□□ -0.53
NIFK-202ENST00000423105 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.73□□□□□ -0.53
NIFK-202ENST00000423105 EMP3P54852 163 aa11.72□□□□□ -0.53
NIFK-202ENST00000423105 CIZ1Q9ULV3 898 aaPredicted RBP11.7□□□□□ -0.54
NIFK-202ENST00000423105 FAM205CA6NFA0 338 aa11.68□□□□□ -0.54
NIFK-202ENST00000423105 TRIM41Q8WV44 630 aa11.65□□□□□ -0.54
NIFK-202ENST00000423105 AMER1Q5JTC6 1135 aaPredicted RBP11.63□□□□□ -0.55
NIFK-202ENST00000423105 CHRM1P11229 460 aaPredicted RBP11.61□□□□□ -0.55
NIFK-202ENST00000423105 PDCD7Q8N8D1 485 aaKnown RBP11.6□□□□□ -0.55
NIFK-202ENST00000423105 PKD2Q13563 968 aa11.57□□□□□ -0.56
NIFK-202ENST00000423105 PYGBP11216 843 aa11.56□□□□□ -0.56
NIFK-202ENST00000423105 ECM2O94769 699 aaPredicted RBP11.53□□□□□ -0.56
NIFK-202ENST00000423105 C3orf67Q6ZVT6 689 aa11.5□□□□□ -0.57
NIFK-202ENST00000423105 RTN4Q9NQC3 1192 aaKnown RBP11.5□□□□□ -0.57
NIFK-202ENST00000423105 PCDHB8Q9UN66 801 aa11.5□□□□□ -0.57
NIFK-202ENST00000423105 RNF166Q96A37 237 aaPredicted RBP11.49□□□□□ -0.57
NIFK-202ENST00000423105 ZNF467Q7Z7K2 595 aaPredicted RBP11.47□□□□□ -0.57
NIFK-202ENST00000423105 HOXB3P14651 431 aaPredicted RBP11.46□□□□□ -0.57
NIFK-202ENST00000423105 L3MBTL3Q96JM7 780 aaPredicted RBP11.42□□□□□ -0.58
NIFK-202ENST00000423105 TAOK2Q9UL54 1235 aa11.42□□□□□ -0.58
NIFK-202ENST00000423105 RIOK3O14730 519 aaKnown RBP11.41□□□□□ -0.58
NIFK-202ENST00000423105 RGL2O15211 777 aa11.38□□□□□ -0.59
NIFK-202ENST00000423105 HOXB1P14653 301 aaPredicted RBP11.37□□□□□ -0.59
NIFK-202ENST00000423105 RNF25Q96BH1 459 aaPredicted RBP11.37□□□□□ -0.59
NIFK-202ENST00000423105 MYT1LQ9UL68 1186 aa11.36□□□□□ -0.59
NIFK-202ENST00000423105 VGFO15240 615 aaPredicted RBP11.35□□□□□ -0.59
NIFK-202ENST00000423105 PDAP1Q13442 181 aaKnown RBP11.35□□□□□ -0.59
NIFK-202ENST00000423105 DPY19L2Q6NUT2 758 aa11.35□□□□□ -0.59
NIFK-202ENST00000423105 ILDR1Q86SU0 546 aaPredicted RBP11.33□□□□□ -0.6
NIFK-202ENST00000423105 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.33□□□□□ -0.64e-7■■■■□ 25.4
NIFK-202ENST00000423105 ERBB3P21860 1342 aa11.33□□□□□ -0.6
NIFK-202ENST00000423105 PSEN1P49768 467 aa11.32□□□□□ -0.6
NIFK-202ENST00000423105 MKRN3Q13064 507 aaKnown RBP11.32□□□□□ -0.6
NIFK-202ENST00000423105 VARS2Q5ST30 1063 aaKnown RBP11.27□□□□□ -0.61
NIFK-202ENST00000423105 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.25□□□□□ -0.61
NIFK-202ENST00000423105 DCAF8L2P0C7V8 631 aa11.25□□□□□ -0.61
NIFK-202ENST00000423105 ZFP91Q96JP5 570 aaPredicted RBP11.25□□□□□ -0.61
NIFK-202ENST00000423105 GOLGA2Q08379 1002 aa11.24□□□□□ -0.61
NIFK-202ENST00000423105 ZNF710Q8N1W2 664 aa11.23□□□□□ -0.61
NIFK-202ENST00000423105 STK25O00506 426 aa11.21□□□□□ -0.61
NIFK-202ENST00000423105 ZNF687Q8N1G0 1237 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms