RNA–Protein interactions for RNA: ENST00000422939.1

TRPS1-204, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2

Gene TRPS1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-204ENST00000422939 FAM212AQ96EL1 285 aa16.94■□□□□ 0.3
TRPS1-204ENST00000422939 CCDC61Q9Y6R9 512 aa16.93■□□□□ 0.3
TRPS1-204ENST00000422939 GABBR2O75899 941 aa16.92■□□□□ 0.3
TRPS1-204ENST00000422939 DCAF8Q5TAQ9 597 aa16.9■□□□□ 0.3
TRPS1-204ENST00000422939 PHF12Q96QT6 1004 aa16.89■□□□□ 0.29
TRPS1-204ENST00000422939 GSE1Q14687 1217 aa16.84■□□□□ 0.29
TRPS1-204ENST00000422939 KIF12Q96FN5 646 aa16.79■□□□□ 0.28
TRPS1-204ENST00000422939 CIZ1Q9ULV3 898 aaPredicted RBP16.74■□□□□ 0.27
TRPS1-204ENST00000422939 GALR2O43603 387 aaPredicted RBP16.73■□□□□ 0.27
TRPS1-204ENST00000422939 MAP3K13O43283 966 aa16.72■□□□□ 0.27
TRPS1-204ENST00000422939 MS4A3Q96HJ5 214 aa16.7■□□□□ 0.26
TRPS1-204ENST00000422939 PYGBP11216 843 aa16.69■□□□□ 0.26
TRPS1-204ENST00000422939 SGIP1Q9BQI5 828 aa16.69■□□□□ 0.26
TRPS1-204ENST00000422939 CHRM1P11229 460 aaPredicted RBP16.66■□□□□ 0.26
TRPS1-204ENST00000422939 PCDHB13Q9Y5F0 798 aa16.64■□□□□ 0.25
TRPS1-204ENST00000422939 TRIM41Q8WV44 630 aa16.6■□□□□ 0.25
TRPS1-204ENST00000422939 DCBLD2Q96PD2 775 aa16.6■□□□□ 0.25
TRPS1-204ENST00000422939 IFNL1Q8IU54 200 aa16.57■□□□□ 0.24
TRPS1-204ENST00000422939 POTEIP0CG38 1075 aa16.55■□□□□ 0.24
TRPS1-204ENST00000422939 TRPC6Q9Y210 931 aa16.51■□□□□ 0.23
TRPS1-204ENST00000422939 ZNF467Q7Z7K2 595 aaPredicted RBP16.49■□□□□ 0.23
TRPS1-204ENST00000422939 PCDHB8Q9UN66 801 aa16.49■□□□□ 0.23
TRPS1-204ENST00000422939 TIE1P35590 1138 aa16.48■□□□□ 0.23
TRPS1-204ENST00000422939 ASTLQ6HA08 431 aaPredicted RBP16.47■□□□□ 0.23
TRPS1-204ENST00000422939 PKD2Q13563 968 aa16.45■□□□□ 0.22
TRPS1-204ENST00000422939 ATMINO43313 823 aaPredicted RBP16.44■□□□□ 0.22
TRPS1-204ENST00000422939 BMP2KQ9NSY1 1161 aaPredicted RBP16.44■□□□□ 0.22
TRPS1-204ENST00000422939 ECM2O94769 699 aaPredicted RBP16.4■□□□□ 0.22
TRPS1-204ENST00000422939 TTLL13PA6NNM8 815 aa16.38■□□□□ 0.21
TRPS1-204ENST00000422939 ATN1P54259 1190 aaPredicted RBP16.37■□□□□ 0.21
TRPS1-204ENST00000422939 PELP1Q8IZL8 1130 aaKnown RBP16.36■□□□□ 0.21
TRPS1-204ENST00000422939 TMEM106CQ9BVX2 250 aa16.36■□□□□ 0.21
TRPS1-204ENST00000422939 RNF25Q96BH1 459 aaPredicted RBP16.33■□□□□ 0.2
TRPS1-204ENST00000422939 RIOK3O14730 519 aaKnown RBP16.32■□□□□ 0.2
TRPS1-204ENST00000422939 PSEN1P49768 467 aa16.32■□□□□ 0.2
TRPS1-204ENST00000422939 PDAP1Q13442 181 aaKnown RBP16.32■□□□□ 0.2
TRPS1-204ENST00000422939 SLC39A7Q92504 469 aa16.27■□□□□ 0.2
TRPS1-204ENST00000422939 TRIM35Q9UPQ4 493 aa16.27■□□□□ 0.2
TRPS1-204ENST00000422939 C7P10643 843 aa16.25■□□□□ 0.19
TRPS1-204ENST00000422939 RGL2O15211 777 aa16.23■□□□□ 0.19
TRPS1-204ENST00000422939 VGFO15240 615 aaPredicted RBP16.23■□□□□ 0.19
TRPS1-204ENST00000422939 TAOK2Q9UL54 1235 aa16.21■□□□□ 0.19
TRPS1-204ENST00000422939 METRNQ9UJH8 293 aa16.2■□□□□ 0.18
TRPS1-204ENST00000422939 IER5LQ5T953 404 aa16.18■□□□□ 0.18
TRPS1-204ENST00000422939 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.15■□□□□ 0.18
TRPS1-204ENST00000422939 ZFP91Q96JP5 570 aaPredicted RBP16.15■□□□□ 0.18
TRPS1-204ENST00000422939 GOLGA2Q08379 1002 aa16.13■□□□□ 0.17
TRPS1-204ENST00000422939 AMER1Q5JTC6 1135 aaPredicted RBP16.12■□□□□ 0.17
TRPS1-204ENST00000422939 CABP2Q9NPB3 220 aa16.1■□□□□ 0.17
TRPS1-204ENST00000422939 MKRN3Q13064 507 aaKnown RBP16.09■□□□□ 0.17
TRPS1-204ENST00000422939 LHX8Q68G74 356 aa16.09■□□□□ 0.17
TRPS1-204ENST00000422939 POTEFA5A3E0 1075 aa16.08■□□□□ 0.16
TRPS1-204ENST00000422939 SEC24BO95487 1268 aa16.08■□□□□ 0.16
TRPS1-204ENST00000422939 COLQQ9Y215 455 aaPredicted RBP16.06■□□□□ 0.16
TRPS1-204ENST00000422939 IRX5P78411 483 aaPredicted RBP16.05■□□□□ 0.16
TRPS1-204ENST00000422939 POTEB2H3BUK9 544 aa16.03■□□□□ 0.16
TRPS1-204ENST00000422939 BCL11BQ9C0K0 894 aaPredicted RBP16.03■□□□□ 0.16
TRPS1-204ENST00000422939 RTN4Q9NQC3 1192 aaKnown RBP16.03■□□□□ 0.16
TRPS1-204ENST00000422939 STK25O00506 426 aa16.02■□□□□ 0.16
TRPS1-204ENST00000422939 OCEL1Q9H607 264 aa16.02■□□□□ 0.16
TRPS1-204ENST00000422939 PLCG2P16885 1265 aa16■□□□□ 0.15
TRPS1-204ENST00000422939 EFCAB3Q8N7B9 438 aa16■□□□□ 0.15
TRPS1-204ENST00000422939 STK24Q9Y6E0 443 aa16■□□□□ 0.15
TRPS1-204ENST00000422939 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.97■□□□□ 0.15
TRPS1-204ENST00000422939 ILDR1Q86SU0 546 aaPredicted RBP15.95■□□□□ 0.14
TRPS1-204ENST00000422939 SOX12O15370 315 aa15.93■□□□□ 0.14
TRPS1-204ENST00000422939 PDCD7Q8N8D1 485 aaKnown RBP15.93■□□□□ 0.14
TRPS1-204ENST00000422939 POTEJP0CG39 1038 aa15.91■□□□□ 0.14
TRPS1-204ENST00000422939 HS6ST3Q8IZP7 471 aa15.91■□□□□ 0.14
TRPS1-204ENST00000422939 CHGAP10645 457 aaKnown RBP15.89■□□□□ 0.13
TRPS1-204ENST00000422939 DCAF8L2P0C7V8 631 aa15.86■□□□□ 0.13
TRPS1-204ENST00000422939 MAMSTRQ6ZN01 415 aa15.85■□□□□ 0.13
TRPS1-204ENST00000422939 OTUD5Q96G74 571 aa15.83■□□□□ 0.12
TRPS1-204ENST00000422939 PHF8Q9UPP1 1060 aa15.83■□□□□ 0.12
TRPS1-204ENST00000422939 DPY19L2Q6NUT2 758 aa15.81■□□□□ 0.12
TRPS1-204ENST00000422939 L3MBTL3Q96JM7 780 aaPredicted RBP15.81■□□□□ 0.12
TRPS1-204ENST00000422939 NLRP6P59044 892 aa15.8■□□□□ 0.12
TRPS1-204ENST00000422939 MFRPQ9BY79 579 aa15.79■□□□□ 0.12
TRPS1-204ENST00000422939 SCUBE2Q9NQ36 999 aa15.79■□□□□ 0.12
TRPS1-204ENST00000422939 DNAJC5Q9H3Z4 198 aa15.78■□□□□ 0.12
TRPS1-204ENST00000422939 FBXO22Q8NEZ5 403 aa15.77■□□□□ 0.12
TRPS1-204ENST00000422939 MS4A4AQ96JQ5 239 aa15.76■□□□□ 0.11
TRPS1-204ENST00000422939 BOLA1Q9Y3E2 137 aa15.71■□□□□ 0.11
TRPS1-204ENST00000422939 G3V3G9 751 aa15.68■□□□□ 0.1
TRPS1-204ENST00000422939 NKX1-1Q15270 411 aaPredicted RBP15.68■□□□□ 0.1
TRPS1-204ENST00000422939 TMEM121BQ9BXQ6 578 aaPredicted RBP15.65■□□□□ 0.1
TRPS1-204ENST00000422939 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.65■□□□□ 0.1
TRPS1-204ENST00000422939 C3orf67Q6ZVT6 689 aa15.63■□□□□ 0.09
TRPS1-204ENST00000422939 MICALL2Q8IY33 904 aa15.6■□□□□ 0.09
TRPS1-204ENST00000422939 SLAIN1Q8ND83 568 aa15.59■□□□□ 0.09
TRPS1-204ENST00000422939 RYDENQ9NUL5 291 aaKnown RBP15.59■□□□□ 0.09
TRPS1-204ENST00000422939 PPP1R37O75864 691 aa15.55■□□□□ 0.08
TRPS1-204ENST00000422939 BBXQ8WY36 941 aaPredicted RBP15.55■□□□□ 0.08
TRPS1-204ENST00000422939 GTPBP6O43824 516 aaPredicted RBP15.52■□□□□ 0.08
TRPS1-204ENST00000422939 TMEM92Q6UXU6 159 aa15.42■□□□□ 0.06
TRPS1-204ENST00000422939 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.42■□□□□ 0.06
TRPS1-204ENST00000422939 SNPHO15079 494 aa15.37■□□□□ 0.05
TRPS1-204ENST00000422939 SPRYD3Q8NCJ5 442 aa15.35■□□□□ 0.05
TRPS1-204ENST00000422939 FAM163AQ96GL9 167 aaPredicted RBP15.33■□□□□ 0.04
TRPS1-204ENST00000422939 KIF3CO14782 793 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms