RNA–Protein interactions for RNA: ENST00000422117.1

LINC02250-201, Transcript of long intergenic non-protein coding RNA 2250, humanhuman

TSL 1 (best) BASIC

Gene LINC02250, Length 2,491 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02250-201ENST00000422117 KCTD17Q8N5Z5 321 aa13.05□□□□□ -0.32
LINC02250-201ENST00000422117 RAD21O60216 631 aa13.04□□□□□ -0.32
LINC02250-201ENST00000422117 FAM9AQ8IZU1 332 aaPredicted RBP13□□□□□ -0.33
LINC02250-201ENST00000422117 CHGAP10645 457 aaKnown RBP12.99□□□□□ -0.33
LINC02250-201ENST00000422117 MTMR7Q9Y216 660 aa12.97□□□□□ -0.33
LINC02250-201ENST00000422117 POLR3GLQ9BT43 218 aa12.96□□□□□ -0.33
LINC02250-201ENST00000422117 LMOD2Q6P5Q4 547 aa12.96□□□□□ -0.34
LINC02250-201ENST00000422117 APBB1O00213 710 aa12.95□□□□□ -0.34
LINC02250-201ENST00000422117 PDE4CQ08493 712 aa12.94□□□□□ -0.34
LINC02250-201ENST00000422117 FOXD4L5Q5VV16 416 aaPredicted RBP12.94□□□□□ -0.34
LINC02250-201ENST00000422117 RGS22Q8NE09 1264 aa12.94□□□□□ -0.34
LINC02250-201ENST00000422117 FOXD4L4Q8WXT5 416 aaPredicted RBP12.94□□□□□ -0.34
LINC02250-201ENST00000422117 MAPK8IP2Q13387 824 aaPredicted RBP12.94□□□□□ -0.34
LINC02250-201ENST00000422117 RBM25P49756 843 aaKnown RBP12.93□□□□□ -0.34
LINC02250-201ENST00000422117 MYCNP04198 464 aaPredicted RBP12.93□□□□□ -0.34
LINC02250-201ENST00000422117 BCL11AQ9H165 835 aa12.91□□□□□ -0.34
LINC02250-201ENST00000422117 ATF5Q9Y2D1 282 aaPredicted RBP12.89□□□□□ -0.35
LINC02250-201ENST00000422117 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.88□□□□□ -0.35
LINC02250-201ENST00000422117 SLC24A3Q9HC58 644 aa12.84□□□□□ -0.35
LINC02250-201ENST00000422117 TAF7LQ5H9L4 462 aa12.81□□□□□ -0.36
LINC02250-201ENST00000422117 AEBP1Q8IUX7 1158 aa12.8□□□□□ -0.36
LINC02250-201ENST00000422117 PIAS4Q8N2W9 510 aaPredicted RBP12.8□□□□□ -0.36
LINC02250-201ENST00000422117 SPDYE4A6NLX3 237 aa12.77□□□□□ -0.37
LINC02250-201ENST00000422117 USP35Q9P2H5 1018 aa12.76□□□□□ -0.37
LINC02250-201ENST00000422117 CCDC82Q8N4S0 544 aa12.74□□□□□ -0.37
LINC02250-201ENST00000422117 ZNF692Q9BU19 519 aaPredicted RBP12.7□□□□□ -0.38
LINC02250-201ENST00000422117 MFAP1P55081 439 aaKnown RBP12.7□□□□□ -0.38
LINC02250-201ENST00000422117 PROM2Q8N271 834 aa12.7□□□□□ -0.38
LINC02250-201ENST00000422117 ZC3H15Q8WU90 426 aaKnown RBP12.7□□□□□ -0.38
LINC02250-201ENST00000422117 TMCO4Q5TGY1 634 aa12.69□□□□□ -0.38
LINC02250-201ENST00000422117 FAM177A1Q8N128 213 aaPredicted RBP12.68□□□□□ -0.38
LINC02250-201ENST00000422117 MKRN3Q13064 507 aaKnown RBP12.67□□□□□ -0.38
LINC02250-201ENST00000422117 IL27Q8NEV9 243 aa12.65□□□□□ -0.38
LINC02250-201ENST00000422117 SPOCK2Q92563 424 aa12.65□□□□□ -0.38
LINC02250-201ENST00000422117 GPBP1L1Q9HC44 474 aaPredicted RBP12.64□□□□□ -0.39
LINC02250-201ENST00000422117 NKX1-1Q15270 411 aaPredicted RBP12.63□□□□□ -0.39
LINC02250-201ENST00000422117 GZF1Q9H116 711 aaPredicted RBP12.62□□□□□ -0.39
LINC02250-201ENST00000422117 BCL11BQ9C0K0 894 aaPredicted RBP12.6□□□□□ -0.39
LINC02250-201ENST00000422117 CWC22Q9HCG8 908 aaKnown RBP12.6□□□□□ -0.39
LINC02250-201ENST00000422117 E9PSI1 815 aa12.59□□□□□ -0.39
LINC02250-201ENST00000422117 NEFLP07196 543 aa12.58□□□□□ -0.4
LINC02250-201ENST00000422117 IRX6P78412 446 aaPredicted RBP12.57□□□□□ -0.4
LINC02250-201ENST00000422117 KCNV2Q8TDN2 545 aa12.56□□□□□ -0.4
LINC02250-201ENST00000422117 TRAIPQ9BWF2 469 aa12.56□□□□□ -0.4
LINC02250-201ENST00000422117 BRPF3Q9ULD4 1205 aa12.55□□□□□ -0.4
LINC02250-201ENST00000422117 RNF216Q9NWF9 866 aaPredicted RBP12.54□□□□□ -0.4
LINC02250-201ENST00000422117 PPM1GO15355 546 aaPredicted RBP12.54□□□□□ -0.4
LINC02250-201ENST00000422117 GTPBP6O43824 516 aaPredicted RBP12.54□□□□□ -0.4
LINC02250-201ENST00000422117 HS6ST3Q8IZP7 471 aa12.53□□□□□ -0.4
LINC02250-201ENST00000422117 SCAF1Q9H7N4 1312 aaKnown RBP12.53□□□□□ -0.4
LINC02250-201ENST00000422117 ZFP91Q96JP5 570 aaPredicted RBP12.52□□□□□ -0.41
LINC02250-201ENST00000422117 WDR70Q9NW82 654 aa12.51□□□□□ -0.41
LINC02250-201ENST00000422117 ZNF592Q92610 1267 aa12.5□□□□□ -0.41
LINC02250-201ENST00000422117 P3H3Q8IVL6 736 aa12.5□□□□□ -0.41
LINC02250-201ENST00000422117 BCCIPQ9P287 314 aaKnown RBP eCLIP12.47□□□□□ -0.41
LINC02250-201ENST00000422117 CERS3Q8IU89 383 aa12.46□□□□□ -0.41
LINC02250-201ENST00000422117 CLUAP1Q96AJ1 413 aa12.44□□□□□ -0.42
LINC02250-201ENST00000422117 RSPH4AQ5TD94 716 aa12.43□□□□□ -0.42
LINC02250-201ENST00000422117 TMED8Q6PL24 325 aaPredicted RBP12.43□□□□□ -0.42
LINC02250-201ENST00000422117 TRIM41Q8WV44 630 aa12.42□□□□□ -0.42
LINC02250-201ENST00000422117 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.41□□□□□ -0.42
LINC02250-201ENST00000422117 IRF5Q13568 498 aa12.4□□□□□ -0.42
LINC02250-201ENST00000422117 ZNF316A6NFI3 1004 aaPredicted RBP12.39□□□□□ -0.43
LINC02250-201ENST00000422117 FBXW7Q969H0 707 aa12.39□□□□□ -0.43
LINC02250-201ENST00000422117 ARID4BQ4LE39 1312 aaPredicted RBP12.39□□□□□ -0.43
LINC02250-201ENST00000422117 RETREG2Q8NC44 543 aa12.38□□□□□ -0.43
LINC02250-201ENST00000422117 CCDC136Q96JN2 1154 aa12.37□□□□□ -0.43
LINC02250-201ENST00000422117 PSMD1Q99460 953 aa12.35□□□□□ -0.43
LINC02250-201ENST00000422117 TICAM2Q86XR7 235 aa12.35□□□□□ -0.43
LINC02250-201ENST00000422117 CIZ1Q9ULV3 898 aaPredicted RBP12.35□□□□□ -0.43
LINC02250-201ENST00000422117 ZMYND10O75800 440 aa12.34□□□□□ -0.43
LINC02250-201ENST00000422117 PKNOX2Q96KN3 472 aa12.34□□□□□ -0.43
LINC02250-201ENST00000422117 KDM4CQ9H3R0 1056 aa12.34□□□□□ -0.43
LINC02250-201ENST00000422117 A0A0U1RQG5 324 aaPredicted RBP12.33□□□□□ -0.44
LINC02250-201ENST00000422117 TRAK2O60296 914 aa12.33□□□□□ -0.44
LINC02250-201ENST00000422117 ZNF526Q8TF50 670 aaPredicted RBP12.33□□□□□ -0.44
LINC02250-201ENST00000422117 RNF25Q96BH1 459 aaPredicted RBP12.33□□□□□ -0.44
LINC02250-201ENST00000422117 FGD1P98174 961 aa12.31□□□□□ -0.44
LINC02250-201ENST00000422117 MKRN4PQ13434 485 aaPredicted RBP12.31□□□□□ -0.44
LINC02250-201ENST00000422117 CCDC125Q86Z20 511 aa12.29□□□□□ -0.44
LINC02250-201ENST00000422117 KDM4AO75164 1064 aa12.28□□□□□ -0.44
LINC02250-201ENST00000422117 ZNF777Q9ULD5 760 aaPredicted RBP12.28□□□□□ -0.44
LINC02250-201ENST00000422117 CCDC180Q9P1Z9 1646 aa12.27□□□□□ -0.44
LINC02250-201ENST00000422117 SEMA3EO15041 775 aa12.26□□□□□ -0.45
LINC02250-201ENST00000422117 CLSTN1O94985 981 aa12.25□□□□□ -0.45
LINC02250-201ENST00000422117 BARGINQ6ZT62 677 aa12.25□□□□□ -0.45
LINC02250-201ENST00000422117 PRDM16Q9HAZ2 1276 aa12.24□□□□□ -0.45
LINC02250-201ENST00000422117 CCDC27Q2M243 656 aa12.22□□□□□ -0.45
LINC02250-201ENST00000422117 ONECUT3O60422 494 aaPredicted RBP12.21□□□□□ -0.45
LINC02250-201ENST00000422117 CC2D2BQ6DHV5 1058 aa12.21□□□□□ -0.45
LINC02250-201ENST00000422117 SMARCA5O60264 1052 aaPredicted RBP12.19□□□□□ -0.46
LINC02250-201ENST00000422117 FLIIQ13045 1269 aa12.19□□□□□ -0.46
LINC02250-201ENST00000422117 ABCC9O60706 1549 aa12.19□□□□□ -0.46
LINC02250-201ENST00000422117 FAM117AQ9C073 453 aa12.19□□□□□ -0.46
LINC02250-201ENST00000422117 CADPS2Q86UW7 1296 aa12.18□□□□□ -0.46
LINC02250-201ENST00000422117 POLA2Q14181 598 aa12.18□□□□□ -0.46
LINC02250-201ENST00000422117 UNCXA6NJT0 531 aa12.17□□□□□ -0.46
LINC02250-201ENST00000422117 A6NJR5 290 aa12.16□□□□□ -0.46
LINC02250-201ENST00000422117 MYT1LQ9UL68 1186 aa12.16□□□□□ -0.46
LINC02250-201ENST00000422117 CADPSQ9ULU8 1353 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms