RNA–Protein interactions for RNA: ENST00000421461.6

NEB-207, Transcript of nebulin, humanhuman

TSL 5

Gene NEB, Length 1,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-207ENST00000421461 LCE2DQ5TA82 110 aaPredicted RBP9.6□□□□□ -0.87
NEB-207ENST00000421461 PHF12Q96QT6 1004 aa9.59□□□□□ -0.87
NEB-207ENST00000421461 NPM1P06748 294 aaKnown RBP eCLIP9.58□□□□□ -0.88
NEB-207ENST00000421461 FAM163AQ96GL9 167 aaPredicted RBP9.58□□□□□ -0.88
NEB-207ENST00000421461 SCUBE2Q9NQ36 999 aa9.58□□□□□ -0.88
NEB-207ENST00000421461 POTEJP0CG39 1038 aa9.57□□□□□ -0.88
NEB-207ENST00000421461 ATMINO43313 823 aaPredicted RBP9.55□□□□□ -0.88
NEB-207ENST00000421461 MS4A3Q96HJ5 214 aa9.48□□□□□ -0.89
NEB-207ENST00000421461 CDAN1Q8IWY9 1227 aa9.46□□□□□ -0.9
NEB-207ENST00000421461 MNX1P50219 401 aaPredicted RBP9.44□□□□□ -0.9
NEB-207ENST00000421461 ATN1P54259 1190 aaPredicted RBP9.4□□□□□ -0.9
NEB-207ENST00000421461 POTEFA5A3E0 1075 aa9.34□□□□□ -0.91
NEB-207ENST00000421461 TIE1P35590 1138 aa9.3□□□□□ -0.92
NEB-207ENST00000421461 CCDC61Q9Y6R9 512 aa9.3□□□□□ -0.92
NEB-207ENST00000421461 BMP2KQ9NSY1 1161 aaPredicted RBP9.29□□□□□ -0.92
NEB-207ENST00000421461 MMRN1Q13201 1228 aa9.28□□□□□ -0.92
NEB-207ENST00000421461 KIF12Q96FN5 646 aa9.28□□□□□ -0.92
NEB-207ENST00000421461 SPDYE4A6NLX3 237 aa9.27□□□□□ -0.93
NEB-207ENST00000421461 SEC24BO95487 1268 aa9.27□□□□□ -0.93
NEB-207ENST00000421461 ST18O60284 1047 aa9.25□□□□□ -0.93
NEB-207ENST00000421461 TSPYL2Q9H2G4 693 aaPredicted RBP9.25□□□□□ -0.93
NEB-207ENST00000421461 IER5LQ5T953 404 aa9.24□□□□□ -0.93
NEB-207ENST00000421461 SPNS2Q8IVW8 549 aa9.24□□□□□ -0.93
NEB-207ENST00000421461 TMEM121BQ9BXQ6 578 aaPredicted RBP9.21□□□□□ -0.94
NEB-207ENST00000421461 COLQQ9Y215 455 aaPredicted RBP9.21□□□□□ -0.94
NEB-207ENST00000421461 SLAIN1Q8ND83 568 aa9.19□□□□□ -0.94
NEB-207ENST00000421461 TTLL13PA6NNM8 815 aa9.17□□□□□ -0.94
NEB-207ENST00000421461 MAP3K13O43283 966 aa9.16□□□□□ -0.94
NEB-207ENST00000421461 TRPC6Q9Y210 931 aa9.16□□□□□ -0.94
NEB-207ENST00000421461 SGIP1Q9BQI5 828 aa9.15□□□□□ -0.94
NEB-207ENST00000421461 SNPHO15079 494 aa9.13□□□□□ -0.95
NEB-207ENST00000421461 TRIM35Q9UPQ4 493 aa9.1□□□□□ -0.95
NEB-207ENST00000421461 PLEKHG5O94827 1062 aa9.06□□□□□ -0.96
NEB-207ENST00000421461 PLCG2P16885 1265 aa9.04□□□□□ -0.96
NEB-207ENST00000421461 PCDHB13Q9Y5F0 798 aa9.01□□□□□ -0.97
NEB-207ENST00000421461 RASEFQ8IZ41 740 aa9□□□□□ -0.97
NEB-207ENST00000421461 PROM2Q8N271 834 aa8.99□□□□□ -0.97
NEB-207ENST00000421461 IRX5P78411 483 aaPredicted RBP8.98□□□□□ -0.97
NEB-207ENST00000421461 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.98□□□□□ -0.97
NEB-207ENST00000421461 MARVELD3Q96A59 401 aa8.96□□□□□ -0.98
NEB-207ENST00000421461 OCEL1Q9H607 264 aa8.96□□□□□ -0.98
NEB-207ENST00000421461 TMEM106CQ9BVX2 250 aa8.95□□□□□ -0.98
NEB-207ENST00000421461 MIER1Q8N108 512 aa8.93□□□□□ -0.98
NEB-207ENST00000421461 EMP3P54852 163 aa8.91□□□□□ -0.98
NEB-207ENST00000421461 IFNL1Q8IU54 200 aa8.91□□□□□ -0.98
NEB-207ENST00000421461 KRTAP3-3Q9BYR6 98 aa8.9□□□□□ -0.98
NEB-207ENST00000421461 KRTAP3-2Q9BYR7 98 aa8.9□□□□□ -0.98
NEB-207ENST00000421461 FKBP8Q14318 412 aa8.87□□□□□ -0.99
NEB-207ENST00000421461 HS3ST6Q96QI5 342 aa8.87□□□□□ -0.99
NEB-207ENST00000421461 ZBTB47Q9UFB7 747 aaPredicted RBP8.87□□□□□ -0.99
NEB-207ENST00000421461 FAM205CA6NFA0 338 aa8.82□□□□□ -1
NEB-207ENST00000421461 POTEB3A0JP26 581 aa8.81□□□□□ -1
NEB-207ENST00000421461 NUBP1P53384 320 aa8.81□□□□□ -1
NEB-207ENST00000421461 POTEBQ6S5H4 581 aa8.81□□□□□ -1
NEB-207ENST00000421461 L3MBTL3Q96JM7 780 aaPredicted RBP8.8□□□□□ -1
NEB-207ENST00000421461 C3orf67Q6ZVT6 689 aa8.79□□□□□ -1
NEB-207ENST00000421461 FAM212AQ96EL1 285 aa8.79□□□□□ -1
NEB-207ENST00000421461 PLCD3Q8N3E9 789 aa8.77□□□□□ -1.01
NEB-207ENST00000421461 RNF166Q96A37 237 aaPredicted RBP8.74□□□□□ -1.01
NEB-207ENST00000421461 PDCD7Q8N8D1 485 aaKnown RBP8.72□□□□□ -1.01
NEB-207ENST00000421461 HOXB1P14653 301 aaPredicted RBP8.66□□□□□ -1.02
NEB-207ENST00000421461 MKRN3Q13064 507 aaKnown RBP8.66□□□□□ -1.02
NEB-207ENST00000421461 MYT1LQ9UL68 1186 aa8.66□□□□□ -1.02
NEB-207ENST00000421461 PTGER2P43116 358 aa8.65□□□□□ -1.02
NEB-207ENST00000421461 GOLGA2Q08379 1002 aa8.65□□□□□ -1.02
NEB-207ENST00000421461 ERBB3P21860 1342 aa8.62□□□□□ -1.03
NEB-207ENST00000421461 PCDHB8Q9UN66 801 aa8.62□□□□□ -1.03
NEB-207ENST00000421461 PYGBP11216 843 aa8.61□□□□□ -1.03
NEB-207ENST00000421461 HOXB3P14651 431 aaPredicted RBP8.61□□□□□ -1.03
NEB-207ENST00000421461 DCAF8Q5TAQ9 597 aa8.61□□□□□ -1.03
NEB-207ENST00000421461 ZNF710Q8N1W2 664 aa8.61□□□□□ -1.03
NEB-207ENST00000421461 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.61□□□□□ -1.03
NEB-207ENST00000421461 DOK7Q18PE1 504 aa8.59□□□□□ -1.03
NEB-207ENST00000421461 ZNF467Q7Z7K2 595 aaPredicted RBP8.59□□□□□ -1.03
NEB-207ENST00000421461 ILDR1Q86SU0 546 aaPredicted RBP8.59□□□□□ -1.03
NEB-207ENST00000421461 FBXO3Q9UK99 471 aa8.57□□□□□ -1.04
NEB-207ENST00000421461 RIMBP2O15034 1052 aa8.55□□□□□ -1.04
NEB-207ENST00000421461 G3V3G9 751 aa8.54□□□□□ -1.04
NEB-207ENST00000421461 ZNF687Q8N1G0 1237 aa8.54□□□□□ -1.04
NEB-207ENST00000421461 ZSWIM6Q9HCJ5 1215 aa8.52□□□□□ -1.05
NEB-207ENST00000421461 VARS2Q5ST30 1063 aaKnown RBP8.51□□□□□ -1.05
NEB-207ENST00000421461 BOLA1Q9Y3E2 137 aa8.51□□□□□ -1.05
NEB-207ENST00000421461 CHRM1P11229 460 aaPredicted RBP8.5□□□□□ -1.05
NEB-207ENST00000421461 AMER1Q5JTC6 1135 aaPredicted RBP8.48□□□□□ -1.05
NEB-207ENST00000421461 PSEN1P49768 467 aa8.47□□□□□ -1.05
NEB-207ENST00000421461 GSE1Q14687 1217 aa8.47□□□□□ -1.05
NEB-207ENST00000421461 DPY19L2Q6NUT2 758 aa8.46□□□□□ -1.06
NEB-207ENST00000421461 VASPP50552 380 aaPredicted RBP8.43□□□□□ -1.06
NEB-207ENST00000421461 RTN4Q9NQC3 1192 aaKnown RBP8.41□□□□□ -1.06
NEB-207ENST00000421461 PDAP1Q13442 181 aaKnown RBP8.4□□□□□ -1.06
NEB-207ENST00000421461 PLA2G2EQ9NZK7 142 aa8.4□□□□□ -1.06
NEB-207ENST00000421461 ANKRD13DQ6ZTN6 518 aa8.39□□□□□ -1.07
NEB-207ENST00000421461 GPR153Q6NV75 609 aa8.38□□□□□ -1.07
NEB-207ENST00000421461 HCSTQ9UBK5 93 aa8.36□□□□□ -1.07
NEB-207ENST00000421461 LSM11P83369 360 aaKnown RBP eCLIP8.34□□□□□ -1.07
NEB-207ENST00000421461 CABP2Q9NPB3 220 aa8.34□□□□□ -1.07
NEB-207ENST00000421461 IFNLR1Q8IU57 520 aaPredicted RBP8.31□□□□□ -1.08
NEB-207ENST00000421461 PBX2P40425 430 aa8.3□□□□□ -1.08
NEB-207ENST00000421461 ZNF316A6NFI3 1004 aaPredicted RBP8.28□□□□□ -1.08
NEB-207ENST00000421461 RGS20O76081 388 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms