RNA–Protein interactions for RNA: ENST00000421386.1

SCG2-202, Transcript of secretogranin II, humanhuman

TSL 3

Gene SCG2, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-202ENST00000421386 POTEJP0CG39 1038 aa10.18□□□□□ -0.78
SCG2-202ENST00000421386 ASTLQ6HA08 431 aaPredicted RBP10.18□□□□□ -0.78
SCG2-202ENST00000421386 TRPC6Q9Y210 931 aa10.18□□□□□ -0.78
SCG2-202ENST00000421386 RASEFQ8IZ41 740 aa10.17□□□□□ -0.78
SCG2-202ENST00000421386 KIF12Q96FN5 646 aa10.15□□□□□ -0.78
SCG2-202ENST00000421386 METRNQ9UJH8 293 aa10.13□□□□□ -0.79
SCG2-202ENST00000421386 ATN1P54259 1190 aaPredicted RBP10.12□□□□□ -0.79
SCG2-202ENST00000421386 MIER1Q8N108 512 aa10.12□□□□□ -0.79
SCG2-202ENST00000421386 MAP3K13O43283 966 aa10.09□□□□□ -0.79
SCG2-202ENST00000421386 POTEFA5A3E0 1075 aa10.08□□□□□ -0.8
SCG2-202ENST00000421386 BMP2KQ9NSY1 1161 aaPredicted RBP10.08□□□□□ -0.8
SCG2-202ENST00000421386 SLC39A7Q92504 469 aa10.05□□□□□ -0.8
SCG2-202ENST00000421386 C7P10643 843 aa10.04□□□□□ -0.8
SCG2-202ENST00000421386 FKBP8Q14318 412 aa10.04□□□□□ -0.8
SCG2-202ENST00000421386 NUBP1P53384 320 aa10.03□□□□□ -0.8
SCG2-202ENST00000421386 PLCD3Q8N3E9 789 aa10.01□□□□□ -0.81
SCG2-202ENST00000421386 TTLL13PA6NNM8 815 aa9.98□□□□□ -0.81
SCG2-202ENST00000421386 PLEKHG5O94827 1062 aa9.97□□□□□ -0.81
SCG2-202ENST00000421386 LCE2DQ5TA82 110 aaPredicted RBP9.97□□□□□ -0.81
SCG2-202ENST00000421386 COLQQ9Y215 455 aaPredicted RBP9.97□□□□□ -0.81
SCG2-202ENST00000421386 TIE1P35590 1138 aa9.96□□□□□ -0.82
SCG2-202ENST00000421386 PLSCR2Q9NRY7 297 aa9.96□□□□□ -0.82
SCG2-202ENST00000421386 POTEMA6NI47 508 aa9.95□□□□□ -0.82
SCG2-202ENST00000421386 POTEGQ6S5H5 508 aa9.93□□□□□ -0.82
SCG2-202ENST00000421386 IFNL1Q8IU54 200 aa9.93□□□□□ -0.82
SCG2-202ENST00000421386 PCDHB13Q9Y5F0 798 aa9.93□□□□□ -0.82
SCG2-202ENST00000421386 TRIM35Q9UPQ4 493 aa9.89□□□□□ -0.83
SCG2-202ENST00000421386 MAMSTRQ6ZN01 415 aa9.86□□□□□ -0.83
SCG2-202ENST00000421386 SGIP1Q9BQI5 828 aa9.86□□□□□ -0.83
SCG2-202ENST00000421386 FAM212AQ96EL1 285 aa9.84□□□□□ -0.83
SCG2-202ENST00000421386 SCUBE2Q9NQ36 999 aa9.84□□□□□ -0.83
SCG2-202ENST00000421386 ZBTB47Q9UFB7 747 aaPredicted RBP9.84□□□□□ -0.83
SCG2-202ENST00000421386 FAM163AQ96GL9 167 aaPredicted RBP9.83□□□□□ -0.84
SCG2-202ENST00000421386 TMEM106CQ9BVX2 250 aa9.83□□□□□ -0.84
SCG2-202ENST00000421386 SEC24BO95487 1268 aa9.82□□□□□ -0.84
SCG2-202ENST00000421386 PYGBP11216 843 aa9.82□□□□□ -0.84
SCG2-202ENST00000421386 IER5LQ5T953 404 aa9.79□□□□□ -0.84
SCG2-202ENST00000421386 DCAF8Q5TAQ9 597 aa9.79□□□□□ -0.84
SCG2-202ENST00000421386 PCDHB8Q9UN66 801 aa9.79□□□□□ -0.84
SCG2-202ENST00000421386 IRX5P78411 483 aaPredicted RBP9.76□□□□□ -0.85
SCG2-202ENST00000421386 VASPP50552 380 aaPredicted RBP9.73□□□□□ -0.85
SCG2-202ENST00000421386 FBXO3Q9UK99 471 aa9.71□□□□□ -0.86
SCG2-202ENST00000421386 PLCG2P16885 1265 aa9.69□□□□□ -0.86
SCG2-202ENST00000421386 SLAIN1Q8ND83 568 aa9.69□□□□□ -0.86
SCG2-202ENST00000421386 KLHL34Q8N239 644 aa9.66□□□□□ -0.86
SCG2-202ENST00000421386 ST18O60284 1047 aa9.65□□□□□ -0.86
SCG2-202ENST00000421386 OCEL1Q9H607 264 aa9.64□□□□□ -0.87
SCG2-202ENST00000421386 PDCD7Q8N8D1 485 aaKnown RBP9.63□□□□□ -0.87
SCG2-202ENST00000421386 PCDH10Q9P2E7 1040 aa9.63□□□□□ -0.87
SCG2-202ENST00000421386 IFNLR1Q8IU57 520 aaPredicted RBP9.61□□□□□ -0.87
SCG2-202ENST00000421386 GSE1Q14687 1217 aa9.59□□□□□ -0.87
SCG2-202ENST00000421386 CDAN1Q8IWY9 1227 aa9.58□□□□□ -0.88
SCG2-202ENST00000421386 CHRM1P11229 460 aaPredicted RBP9.57□□□□□ -0.88
SCG2-202ENST00000421386 ZNF467Q7Z7K2 595 aaPredicted RBP9.56□□□□□ -0.88
SCG2-202ENST00000421386 PSEN1P49768 467 aa9.55□□□□□ -0.88
SCG2-202ENST00000421386 DPY19L2Q6NUT2 758 aa9.53□□□□□ -0.88
SCG2-202ENST00000421386 MARVELD3Q96A59 401 aa9.51□□□□□ -0.89
SCG2-202ENST00000421386 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.51□□□□□ -0.89
SCG2-202ENST00000421386 ILDR1Q86SU0 546 aaPredicted RBP9.5□□□□□ -0.89
SCG2-202ENST00000421386 SPOCK2Q92563 424 aa9.5□□□□□ -0.89
SCG2-202ENST00000421386 MKRN3Q13064 507 aaKnown RBP9.49□□□□□ -0.89
SCG2-202ENST00000421386 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.49□□□□□ -0.89
SCG2-202ENST00000421386 CIZ1Q9ULV3 898 aaPredicted RBP9.48□□□□□ -0.89
SCG2-202ENST00000421386 GOLGA2Q08379 1002 aa9.46□□□□□ -0.9
SCG2-202ENST00000421386 PDAP1Q13442 181 aaKnown RBP9.46□□□□□ -0.9
SCG2-202ENST00000421386 CABP2Q9NPB3 220 aa9.46□□□□□ -0.9
SCG2-202ENST00000421386 POTEB3A0JP26 581 aa9.45□□□□□ -0.9
SCG2-202ENST00000421386 POTEBQ6S5H4 581 aa9.45□□□□□ -0.9
SCG2-202ENST00000421386 C3orf67Q6ZVT6 689 aa9.43□□□□□ -0.9
SCG2-202ENST00000421386 L3MBTL3Q96JM7 780 aaPredicted RBP9.41□□□□□ -0.9
SCG2-202ENST00000421386 TMEM121BQ9BXQ6 578 aaPredicted RBP9.41□□□□□ -0.9
SCG2-202ENST00000421386 SNPHO15079 494 aa9.39□□□□□ -0.91
SCG2-202ENST00000421386 SPNS2Q8IVW8 549 aa9.38□□□□□ -0.91
SCG2-202ENST00000421386 HOXB3P14651 431 aaPredicted RBP9.36□□□□□ -0.91
SCG2-202ENST00000421386 EFCAB3Q8N7B9 438 aa9.36□□□□□ -0.91
SCG2-202ENST00000421386 RNF25Q96BH1 459 aaPredicted RBP9.36□□□□□ -0.91
SCG2-202ENST00000421386 EMP3P54852 163 aa9.35□□□□□ -0.91
SCG2-202ENST00000421386 MYT1Q01538 1121 aa9.35□□□□□ -0.91
SCG2-202ENST00000421386 MMRN1Q13201 1228 aa9.35□□□□□ -0.91
SCG2-202ENST00000421386 BOLA1Q9Y3E2 137 aa9.35□□□□□ -0.91
SCG2-202ENST00000421386 KRTAP3-3Q9BYR6 98 aa9.34□□□□□ -0.91
SCG2-202ENST00000421386 KRTAP3-2Q9BYR7 98 aa9.34□□□□□ -0.91
SCG2-202ENST00000421386 HS3ST6Q96QI5 342 aa9.33□□□□□ -0.92
SCG2-202ENST00000421386 FAM205CA6NFA0 338 aa9.32□□□□□ -0.92
SCG2-202ENST00000421386 TMEM92Q6UXU6 159 aa9.31□□□□□ -0.92
SCG2-202ENST00000421386 MS4A4AQ96JQ5 239 aa9.29□□□□□ -0.92
SCG2-202ENST00000421386 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.26□□□□□ -0.93
SCG2-202ENST00000421386 ZFP91Q96JP5 570 aaPredicted RBP9.26□□□□□ -0.93
SCG2-202ENST00000421386 MICALL2Q8IY33 904 aa9.24□□□□□ -0.93
SCG2-202ENST00000421386 RIOK3O14730 519 aaKnown RBP9.23□□□□□ -0.93
SCG2-202ENST00000421386 TRIM41Q8WV44 630 aa9.23□□□□□ -0.93
SCG2-202ENST00000421386 PHF8Q9UPP1 1060 aa9.23□□□□□ -0.93
SCG2-202ENST00000421386 G3V3G9 751 aa9.22□□□□□ -0.93
SCG2-202ENST00000421386 HOXB1P14653 301 aaPredicted RBP9.21□□□□□ -0.94
SCG2-202ENST00000421386 VGFO15240 615 aaPredicted RBP9.17□□□□□ -0.94
SCG2-202ENST00000421386 SOX12O15370 315 aa9.16□□□□□ -0.94
SCG2-202ENST00000421386 DOK7Q18PE1 504 aa9.16□□□□□ -0.94
SCG2-202ENST00000421386 ZNF710Q8N1W2 664 aa9.16□□□□□ -0.94
SCG2-202ENST00000421386 ERBB3P21860 1342 aa9.14□□□□□ -0.95
SCG2-202ENST00000421386 VARS2Q5ST30 1063 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms