RNA–Protein interactions for RNA: ENST00000420107.1

CNOT11-202, Transcript of CCR4-NOT transcription complex subunit 11, humanhuman

TSL 2

Gene CNOT11, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11-202ENST00000420107 FARP1Q9Y4F1 1045 aaPredicted RBP13.93□□□□□ -0.18
CNOT11-202ENST00000420107 CHRM1P11229 460 aaPredicted RBP13.92□□□□□ -0.18
CNOT11-202ENST00000420107 PRKAR2AP13861 404 aaKnown RBP13.91□□□□□ -0.18
CNOT11-202ENST00000420107 CHRDL2Q6WN34 429 aa13.89□□□□□ -0.19
CNOT11-202ENST00000420107 CHGAP10645 457 aaKnown RBP13.88□□□□□ -0.19
CNOT11-202ENST00000420107 RIOK3O14730 519 aaKnown RBP13.87□□□□□ -0.19
CNOT11-202ENST00000420107 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.87□□□□□ -0.19
CNOT11-202ENST00000420107 HS6ST3Q8IZP7 471 aa13.85□□□□□ -0.19
CNOT11-202ENST00000420107 PIP4P2Q8N4L2 257 aa13.83□□□□□ -0.2
CNOT11-202ENST00000420107 PYGBP11216 843 aa13.81□□□□□ -0.2
CNOT11-202ENST00000420107 HAP1P54257 671 aaPredicted RBP13.8□□□□□ -0.2
CNOT11-202ENST00000420107 TAOK2Q9UL54 1235 aa13.8□□□□□ -0.2
CNOT11-202ENST00000420107 TSPYL2Q9H2G4 693 aaPredicted RBP13.79□□□□□ -0.2
CNOT11-202ENST00000420107 DNAJC5Q9H3Z4 198 aa13.79□□□□□ -0.2
CNOT11-202ENST00000420107 PAXIP1Q6ZW49 1069 aaPredicted RBP13.78□□□□□ -0.2
CNOT11-202ENST00000420107 VGFO15240 615 aaPredicted RBP13.77□□□□□ -0.21
CNOT11-202ENST00000420107 SGIP1Q9BQI5 828 aa13.75□□□□□ -0.21
CNOT11-202ENST00000420107 SPRYD3Q8NCJ5 442 aa13.73□□□□□ -0.21
CNOT11-202ENST00000420107 CFAP44Q96MT7 982 aa13.73□□□□□ -0.21
CNOT11-202ENST00000420107 CCDC61Q9Y6R9 512 aa13.72□□□□□ -0.21
CNOT11-202ENST00000420107 STK25O00506 426 aa13.68□□□□□ -0.22
CNOT11-202ENST00000420107 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.67□□□□□ -0.22
CNOT11-202ENST00000420107 NKX1-1Q15270 411 aaPredicted RBP13.67□□□□□ -0.22
CNOT11-202ENST00000420107 ZFP91Q96JP5 570 aaPredicted RBP13.67□□□□□ -0.22
CNOT11-202ENST00000420107 VSIG10Q8N0Z9 540 aa13.65□□□□□ -0.22
CNOT11-202ENST00000420107 ZNF467Q7Z7K2 595 aaPredicted RBP13.64□□□□□ -0.23
CNOT11-202ENST00000420107 PAK3O75914 559 aaPredicted RBP13.63□□□□□ -0.23
CNOT11-202ENST00000420107 POTEHQ6S545 545 aa13.62□□□□□ -0.23
CNOT11-202ENST00000420107 BCL11BQ9C0K0 894 aaPredicted RBP13.62□□□□□ -0.23
CNOT11-202ENST00000420107 STK24Q9Y6E0 443 aa13.6□□□□□ -0.23
CNOT11-202ENST00000420107 ZNF579Q8NAF0 562 aaKnown RBP13.58□□□□□ -0.24
CNOT11-202ENST00000420107 PCDHB8Q9UN66 801 aa13.58□□□□□ -0.24
CNOT11-202ENST00000420107 PCDHB13Q9Y5F0 798 aa13.58□□□□□ -0.24
CNOT11-202ENST00000420107 TSHZ2Q9NRE2 1034 aa13.57□□□□□ -0.24
CNOT11-202ENST00000420107 GTPBP6O43824 516 aaPredicted RBP13.56□□□□□ -0.24
CNOT11-202ENST00000420107 PDAP1Q13442 181 aaKnown RBP13.56□□□□□ -0.24
CNOT11-202ENST00000420107 KIF12Q96FN5 646 aa13.55□□□□□ -0.24
CNOT11-202ENST00000420107 KDM2AQ9Y2K7 1162 aa13.55□□□□□ -0.24
CNOT11-202ENST00000420107 CD44P16070 742 aaKnown RBP13.54□□□□□ -0.24
CNOT11-202ENST00000420107 MAP3K13O43283 966 aa13.52□□□□□ -0.25
CNOT11-202ENST00000420107 ZRANB1Q9UGI0 708 aa13.52□□□□□ -0.25
CNOT11-202ENST00000420107 IFNL1Q8IU54 200 aa13.51□□□□□ -0.25
CNOT11-202ENST00000420107 PSEN1P49768 467 aa13.49□□□□□ -0.25
CNOT11-202ENST00000420107 C19orf67A6NJJ6 358 aa13.47□□□□□ -0.25
CNOT11-202ENST00000420107 PHF12Q96QT6 1004 aa13.45□□□□□ -0.26
CNOT11-202ENST00000420107 RYDENQ9NUL5 291 aaKnown RBP13.44□□□□□ -0.26
CNOT11-202ENST00000420107 MFRPQ9BY79 579 aa13.35□□□□□ -0.27
CNOT11-202ENST00000420107 MS4A3Q96HJ5 214 aa13.32□□□□□ -0.28
CNOT11-202ENST00000420107 BCANQ96GW7 911 aa13.31□□□□□ -0.28
CNOT11-202ENST00000420107 CABP2Q9NPB3 220 aa13.31□□□□□ -0.28
CNOT11-202ENST00000420107 EFCAB3Q8N7B9 438 aa13.3□□□□□ -0.28
CNOT11-202ENST00000420107 TRPC6Q9Y210 931 aa13.28□□□□□ -0.28
CNOT11-202ENST00000420107 SOX12O15370 315 aa13.27□□□□□ -0.29
CNOT11-202ENST00000420107 FBXO22Q8NEZ5 403 aa13.26□□□□□ -0.29
CNOT11-202ENST00000420107 NLRP6P59044 892 aa13.23□□□□□ -0.29
CNOT11-202ENST00000420107 TMEM106CQ9BVX2 250 aa13.23□□□□□ -0.29
CNOT11-202ENST00000420107 PHF8Q9UPP1 1060 aa13.23□□□□□ -0.29
CNOT11-202ENST00000420107 HAX1O00165 279 aa13.21□□□□□ -0.29
CNOT11-202ENST00000420107 EVX2Q03828 476 aa13.21□□□□□ -0.29
CNOT11-202ENST00000420107 PPP1R37O75864 691 aa13.19□□□□□ -0.3
CNOT11-202ENST00000420107 TIE1P35590 1138 aa13.19□□□□□ -0.3
CNOT11-202ENST00000420107 CADPS2Q86UW7 1296 aa13.19□□□□□ -0.3
CNOT11-202ENST00000420107 GALR2O43603 387 aaPredicted RBP13.16□□□□□ -0.3
CNOT11-202ENST00000420107 TTLL13PA6NNM8 815 aa13.15□□□□□ -0.3
CNOT11-202ENST00000420107 CLCN6P51797 869 aa13.15□□□□□ -0.3
CNOT11-202ENST00000420107 MS4A4AQ96JQ5 239 aa13.15□□□□□ -0.3
CNOT11-202ENST00000420107 BMP2KQ9NSY1 1161 aaPredicted RBP13.14□□□□□ -0.31
CNOT11-202ENST00000420107 GOLGA2Q08379 1002 aa13.13□□□□□ -0.31
CNOT11-202ENST00000420107 MKRN3Q13064 507 aaKnown RBP13.09□□□□□ -0.31
CNOT11-202ENST00000420107 ILDR1Q86SU0 546 aaPredicted RBP13.07□□□□□ -0.32
CNOT11-202ENST00000420107 TRIM35Q9UPQ4 493 aa13.05□□□□□ -0.32
CNOT11-202ENST00000420107 NBR1Q14596 966 aa13.02□□□□□ -0.33
CNOT11-202ENST00000420107 WDR70Q9NW82 654 aa13□□□□□ -0.33
CNOT11-202ENST00000420107 ATN1P54259 1190 aaPredicted RBP12.99□□□□□ -0.33
CNOT11-202ENST00000420107 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.99□□□□□ -0.33
CNOT11-202ENST00000420107 ATMINO43313 823 aaPredicted RBP12.98□□□□□ -0.33
CNOT11-202ENST00000420107 ASTLQ6HA08 431 aaPredicted RBP12.98□□□□□ -0.33
CNOT11-202ENST00000420107 P3H3Q8IVL6 736 aa12.98□□□□□ -0.33
CNOT11-202ENST00000420107 NCKAP5LQ9HCH0 1330 aa12.97□□□□□ -0.33
CNOT11-202ENST00000420107 KCNV2Q8TDN2 545 aa12.96□□□□□ -0.33
CNOT11-202ENST00000420107 GABBR2O75899 941 aa12.95□□□□□ -0.34
CNOT11-202ENST00000420107 CRISPLD2Q9H0B8 497 aa12.93□□□□□ -0.34
CNOT11-202ENST00000420107 PDCD7Q8N8D1 485 aaKnown RBP12.92□□□□□ -0.34
CNOT11-202ENST00000420107 PRKCSHP14314 528 aaPredicted RBP12.91□□□□□ -0.34
CNOT11-202ENST00000420107 IRX5P78411 483 aaPredicted RBP12.91□□□□□ -0.34
CNOT11-202ENST00000420107 PDE4AP27815 886 aa12.9□□□□□ -0.34
CNOT11-202ENST00000420107 MFSD10Q14728 455 aa12.9□□□□□ -0.34
CNOT11-202ENST00000420107 IER5LQ5T953 404 aa12.9□□□□□ -0.34
CNOT11-202ENST00000420107 DPY19L2Q6NUT2 758 aa12.89□□□□□ -0.35
CNOT11-202ENST00000420107 LARP6Q9BRS8 491 aaKnown RBP12.87□□□□□ -0.35
CNOT11-202ENST00000420107 E2F4Q16254 413 aa12.86□□□□□ -0.35
CNOT11-202ENST00000420107 TPRNQ4KMQ1 711 aa12.86□□□□□ -0.35
CNOT11-202ENST00000420107 OCEL1Q9H607 264 aa12.85□□□□□ -0.35
CNOT11-202ENST00000420107 MICALL2Q8IY33 904 aa12.83□□□□□ -0.36
CNOT11-202ENST00000420107 ARHGEF1Q92888 912 aaKnown RBP12.83□□□□□ -0.36
CNOT11-202ENST00000420107 PELP1Q8IZL8 1130 aaKnown RBP12.82□□□□□ -0.36
CNOT11-202ENST00000420107 DDX27Q96GQ7 796 aaKnown RBP12.82□□□□□ -0.36
CNOT11-202ENST00000420107 TMEM121BQ9BXQ6 578 aaPredicted RBP12.81□□□□□ -0.36
CNOT11-202ENST00000420107 DCBLD2Q96PD2 775 aa12.8□□□□□ -0.36
CNOT11-202ENST00000420107 GPHNQ9NQX3 736 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms