RNA–Protein interactions for RNA: ENST00000419286.2

ATM-202, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-202ENST00000419286 ZNF579Q8NAF0 562 aaKnown RBP10.9□□□□□ -0.66
ATM-202ENST00000419286 PHF12Q96QT6 1004 aa10.89□□□□□ -0.67
ATM-202ENST00000419286 SP7Q8TDD2 431 aaPredicted RBP10.88□□□□□ -0.67
ATM-202ENST00000419286 CIZ1Q9ULV3 898 aaPredicted RBP10.88□□□□□ -0.67
ATM-202ENST00000419286 GSE1Q14687 1217 aa10.87□□□□□ -0.67
ATM-202ENST00000419286 PYGBP11216 843 aa10.82□□□□□ -0.68
ATM-202ENST00000419286 GABBR2O75899 941 aa10.81□□□□□ -0.68
ATM-202ENST00000419286 KIF12Q96FN5 646 aa10.81□□□□□ -0.68
ATM-202ENST00000419286 MAP3K13O43283 966 aa10.79□□□□□ -0.68
ATM-202ENST00000419286 PKD2Q13563 968 aa10.78□□□□□ -0.68
ATM-202ENST00000419286 GALR2O43603 387 aaPredicted RBP10.76□□□□□ -0.69
ATM-202ENST00000419286 CHRM1P11229 460 aaPredicted RBP10.75□□□□□ -0.69
ATM-202ENST00000419286 MS4A3Q96HJ5 214 aa10.75□□□□□ -0.69
ATM-202ENST00000419286 CLCN6P51797 869 aa10.74□□□□□ -0.69
ATM-202ENST00000419286 PCDHB13Q9Y5F0 798 aa10.73□□□□□ -0.69
ATM-202ENST00000419286 IFNL1Q8IU54 200 aa10.7□□□□□ -0.7
ATM-202ENST00000419286 TRIM41Q8WV44 630 aa10.7□□□□□ -0.7
ATM-202ENST00000419286 SGIP1Q9BQI5 828 aa10.7□□□□□ -0.7
ATM-202ENST00000419286 ECM2O94769 699 aaPredicted RBP10.69□□□□□ -0.7
ATM-202ENST00000419286 PCDHB8Q9UN66 801 aa10.69□□□□□ -0.7
ATM-202ENST00000419286 TRPC6Q9Y210 931 aa10.69□□□□□ -0.7
ATM-202ENST00000419286 RNF25Q96BH1 459 aaPredicted RBP10.66□□□□□ -0.7
ATM-202ENST00000419286 RTN4Q9NQC3 1192 aaKnown RBP10.66□□□□□ -0.7
ATM-202ENST00000419286 RGL2O15211 777 aa10.62□□□□□ -0.71
ATM-202ENST00000419286 POTEIP0CG38 1075 aa10.62□□□□□ -0.71
ATM-202ENST00000419286 AMER1Q5JTC6 1135 aaPredicted RBP10.62□□□□□ -0.71
ATM-202ENST00000419286 ZNF467Q7Z7K2 595 aaPredicted RBP10.62□□□□□ -0.71
ATM-202ENST00000419286 DCBLD2Q96PD2 775 aa10.6□□□□□ -0.71
ATM-202ENST00000419286 RIOK3O14730 519 aaKnown RBP10.58□□□□□ -0.72
ATM-202ENST00000419286 BMP2KQ9NSY1 1161 aaPredicted RBP10.58□□□□□ -0.72
ATM-202ENST00000419286 ATMINO43313 823 aaPredicted RBP10.56□□□□□ -0.72
ATM-202ENST00000419286 TIE1P35590 1138 aa10.56□□□□□ -0.72
ATM-202ENST00000419286 TTLL13PA6NNM8 815 aa10.55□□□□□ -0.72
ATM-202ENST00000419286 PSEN1P49768 467 aa10.55□□□□□ -0.72
ATM-202ENST00000419286 ASTLQ6HA08 431 aaPredicted RBP10.55□□□□□ -0.72
ATM-202ENST00000419286 ATN1P54259 1190 aaPredicted RBP10.54□□□□□ -0.72
ATM-202ENST00000419286 PDAP1Q13442 181 aaKnown RBP10.54□□□□□ -0.72
ATM-202ENST00000419286 PELP1Q8IZL8 1130 aaKnown RBP10.54□□□□□ -0.72
ATM-202ENST00000419286 TMEM106CQ9BVX2 250 aa10.54□□□□□ -0.72
ATM-202ENST00000419286 VGFO15240 615 aaPredicted RBP10.51□□□□□ -0.73
ATM-202ENST00000419286 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.5□□□□□ -0.73
ATM-202ENST00000419286 ZFP91Q96JP5 570 aaPredicted RBP10.5□□□□□ -0.73
ATM-202ENST00000419286 TRIM35Q9UPQ4 493 aa10.47□□□□□ -0.73
ATM-202ENST00000419286 TAOK2Q9UL54 1235 aa10.44□□□□□ -0.74
ATM-202ENST00000419286 STK25O00506 426 aa10.42□□□□□ -0.74
ATM-202ENST00000419286 BCL11BQ9C0K0 894 aaPredicted RBP10.42□□□□□ -0.74
ATM-202ENST00000419286 CABP2Q9NPB3 220 aa10.42□□□□□ -0.74
ATM-202ENST00000419286 DCAF8L2P0C7V8 631 aa10.41□□□□□ -0.74
ATM-202ENST00000419286 STK24Q9Y6E0 443 aa10.4□□□□□ -0.74
ATM-202ENST00000419286 SLC39A7Q92504 469 aa10.39□□□□□ -0.75
ATM-202ENST00000419286 CHGAP10645 457 aaKnown RBP10.38□□□□□ -0.75
ATM-202ENST00000419286 METRNQ9UJH8 293 aa10.38□□□□□ -0.75
ATM-202ENST00000419286 POTEFA5A3E0 1075 aa10.37□□□□□ -0.75
ATM-202ENST00000419286 C7P10643 843 aa10.37□□□□□ -0.75
ATM-202ENST00000419286 GOLGA2Q08379 1002 aa10.37□□□□□ -0.75
ATM-202ENST00000419286 EFCAB3Q8N7B9 438 aa10.37□□□□□ -0.75
ATM-202ENST00000419286 IER5LQ5T953 404 aa10.36□□□□□ -0.75
ATM-202ENST00000419286 MKRN3Q13064 507 aaKnown RBP10.35□□□□□ -0.75
ATM-202ENST00000419286 HS6ST3Q8IZP7 471 aa10.35□□□□□ -0.75
ATM-202ENST00000419286 COLQQ9Y215 455 aaPredicted RBP10.35□□□□□ -0.75
ATM-202ENST00000419286 IRX5P78411 483 aaPredicted RBP10.33□□□□□ -0.76
ATM-202ENST00000419286 POTEB2H3BUK9 544 aa10.3□□□□□ -0.76
ATM-202ENST00000419286 SLC24A1O60721 1099 aa10.3□□□□□ -0.76
ATM-202ENST00000419286 SEC24BO95487 1268 aa10.3□□□□□ -0.76
ATM-202ENST00000419286 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.29□□□□□ -0.761e-9■■■■■ 33
ATM-202ENST00000419286 ILDR1Q86SU0 546 aaPredicted RBP10.28□□□□□ -0.76
ATM-202ENST00000419286 OCEL1Q9H607 264 aa10.28□□□□□ -0.76
ATM-202ENST00000419286 PHF8Q9UPP1 1060 aa10.28□□□□□ -0.76
ATM-202ENST00000419286 SOX12O15370 315 aa10.27□□□□□ -0.77
ATM-202ENST00000419286 PLCG2P16885 1265 aa10.27□□□□□ -0.77
ATM-202ENST00000419286 PDCD7Q8N8D1 485 aaKnown RBP10.27□□□□□ -0.77
ATM-202ENST00000419286 NKX1-1Q15270 411 aaPredicted RBP10.26□□□□□ -0.77
ATM-202ENST00000419286 MFRPQ9BY79 579 aa10.26□□□□□ -0.77
ATM-202ENST00000419286 DNAJC5Q9H3Z4 198 aa10.26□□□□□ -0.77
ATM-202ENST00000419286 DPY19L2Q6NUT2 758 aa10.25□□□□□ -0.77
ATM-202ENST00000419286 POTEJP0CG39 1038 aa10.24□□□□□ -0.77
ATM-202ENST00000419286 MS4A4AQ96JQ5 239 aa10.24□□□□□ -0.77
ATM-202ENST00000419286 FBXO22Q8NEZ5 403 aa10.23□□□□□ -0.77
ATM-202ENST00000419286 LHX8Q68G74 356 aa10.22□□□□□ -0.77
ATM-202ENST00000419286 NLRP6P59044 892 aa10.21□□□□□ -0.77
ATM-202ENST00000419286 BBXQ8WY36 941 aaPredicted RBP10.17□□□□□ -0.78
ATM-202ENST00000419286 GTPBP6O43824 516 aaPredicted RBP10.14□□□□□ -0.79
ATM-202ENST00000419286 PPP1R37O75864 691 aa10.14□□□□□ -0.79
ATM-202ENST00000419286 OTUD5Q96G74 571 aa10.12□□□□□ -0.79
ATM-202ENST00000419286 L3MBTL3Q96JM7 780 aaPredicted RBP10.12□□□□□ -0.79
ATM-202ENST00000419286 BOLA1Q9Y3E2 137 aa10.11□□□□□ -0.79
ATM-202ENST00000419286 TMEM121BQ9BXQ6 578 aaPredicted RBP10.09□□□□□ -0.79
ATM-202ENST00000419286 MICALL2Q8IY33 904 aa10.08□□□□□ -0.8
ATM-202ENST00000419286 MAMSTRQ6ZN01 415 aa10.07□□□□□ -0.8
ATM-202ENST00000419286 RYDENQ9NUL5 291 aaKnown RBP10.07□□□□□ -0.8
ATM-202ENST00000419286 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.07□□□□□ -0.8
ATM-202ENST00000419286 G3V3G9 751 aa10.06□□□□□ -0.8
ATM-202ENST00000419286 PAXIP1Q6ZW49 1069 aaPredicted RBP10.05□□□□□ -0.8
ATM-202ENST00000419286 SCUBE2Q9NQ36 999 aa10.05□□□□□ -0.8
ATM-202ENST00000419286 SPRYD3Q8NCJ5 442 aa10.04□□□□□ -0.8
ATM-202ENST00000419286 C3orf67Q6ZVT6 689 aa10.03□□□□□ -0.8
ATM-202ENST00000419286 CFAP44Q96MT7 982 aa10.03□□□□□ -0.8
ATM-202ENST00000419286 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.03□□□□□ -0.8
ATM-202ENST00000419286 TMEM92Q6UXU6 159 aa10□□□□□ -0.81
ATM-202ENST00000419286 SLAIN1Q8ND83 568 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms