RNA–Protein interactions for RNA: ENST00000418424.2

POLR2J4-204, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

BASIC

Gene POLR2J4, Length 324 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-204ENST00000418424 METRNQ9UJH8 293 aa4.95□□□□□ -1.62
POLR2J4-204ENST00000418424 ATMINO43313 823 aaPredicted RBP4.93□□□□□ -1.62
POLR2J4-204ENST00000418424 PLEKHG5O94827 1062 aa4.93□□□□□ -1.62
POLR2J4-204ENST00000418424 SLC39A7Q92504 469 aa4.93□□□□□ -1.62
POLR2J4-204ENST00000418424 C7P10643 843 aa4.92□□□□□ -1.62
POLR2J4-204ENST00000418424 ASTLQ6HA08 431 aaPredicted RBP4.92□□□□□ -1.62
POLR2J4-204ENST00000418424 MIER1Q8N108 512 aa4.92□□□□□ -1.62
POLR2J4-204ENST00000418424 POTEMA6NI47 508 aa4.91□□□□□ -1.62
POLR2J4-204ENST00000418424 POTEGQ6S5H5 508 aa4.9□□□□□ -1.63
POLR2J4-204ENST00000418424 MAMSTRQ6ZN01 415 aa4.9□□□□□ -1.63
POLR2J4-204ENST00000418424 ATN1P54259 1190 aaPredicted RBP4.89□□□□□ -1.63
POLR2J4-204ENST00000418424 CCDC61Q9Y6R9 512 aa4.89□□□□□ -1.63
POLR2J4-204ENST00000418424 PROM2Q8N271 834 aa4.88□□□□□ -1.63
POLR2J4-204ENST00000418424 KIF12Q96FN5 646 aa4.88□□□□□ -1.63
POLR2J4-204ENST00000418424 FAM163AQ96GL9 167 aaPredicted RBP4.88□□□□□ -1.63
POLR2J4-204ENST00000418424 SCUBE2Q9NQ36 999 aa4.88□□□□□ -1.63
POLR2J4-204ENST00000418424 PLCD3Q8N3E9 789 aa4.87□□□□□ -1.63
POLR2J4-204ENST00000418424 MAP3K13O43283 966 aa4.86□□□□□ -1.63
POLR2J4-204ENST00000418424 POTEJP0CG39 1038 aa4.86□□□□□ -1.63
POLR2J4-204ENST00000418424 SEC24BO95487 1268 aa4.85□□□□□ -1.63
POLR2J4-204ENST00000418424 RASEFQ8IZ41 740 aa4.85□□□□□ -1.63
POLR2J4-204ENST00000418424 BMP2KQ9NSY1 1161 aaPredicted RBP4.85□□□□□ -1.63
POLR2J4-204ENST00000418424 TRPC6Q9Y210 931 aa4.85□□□□□ -1.63
POLR2J4-204ENST00000418424 TIE1P35590 1138 aa4.83□□□□□ -1.64
POLR2J4-204ENST00000418424 PCDH10Q9P2E7 1040 aa4.82□□□□□ -1.64
POLR2J4-204ENST00000418424 PCDHB13Q9Y5F0 798 aa4.82□□□□□ -1.64
POLR2J4-204ENST00000418424 POTEFA5A3E0 1075 aa4.81□□□□□ -1.64
POLR2J4-204ENST00000418424 TTLL13PA6NNM8 815 aa4.81□□□□□ -1.64
POLR2J4-204ENST00000418424 ZBTB47Q9UFB7 747 aaPredicted RBP4.81□□□□□ -1.64
POLR2J4-204ENST00000418424 TRIM41Q8WV44 630 aa4.8□□□□□ -1.64
POLR2J4-204ENST00000418424 COLQQ9Y215 455 aaPredicted RBP4.8□□□□□ -1.64
POLR2J4-204ENST00000418424 TRIM35Q9UPQ4 493 aa4.79□□□□□ -1.64
POLR2J4-204ENST00000418424 FAM212AQ96EL1 285 aa4.78□□□□□ -1.64
POLR2J4-204ENST00000418424 LCE2DQ5TA82 110 aaPredicted RBP4.77□□□□□ -1.65
POLR2J4-204ENST00000418424 SGIP1Q9BQI5 828 aa4.77□□□□□ -1.65
POLR2J4-204ENST00000418424 TMEM106CQ9BVX2 250 aa4.77□□□□□ -1.65
POLR2J4-204ENST00000418424 PLCG2P16885 1265 aa4.76□□□□□ -1.65
POLR2J4-204ENST00000418424 NUBP1P53384 320 aa4.76□□□□□ -1.65
POLR2J4-204ENST00000418424 IER5LQ5T953 404 aa4.76□□□□□ -1.65
POLR2J4-204ENST00000418424 IFNL1Q8IU54 200 aa4.76□□□□□ -1.65
POLR2J4-204ENST00000418424 SLAIN1Q8ND83 568 aa4.76□□□□□ -1.65
POLR2J4-204ENST00000418424 FKBP8Q14318 412 aa4.75□□□□□ -1.65
POLR2J4-204ENST00000418424 DCAF8Q5TAQ9 597 aa4.75□□□□□ -1.65
POLR2J4-204ENST00000418424 CDAN1Q8IWY9 1227 aa4.73□□□□□ -1.65
POLR2J4-204ENST00000418424 PYGBP11216 843 aa4.72□□□□□ -1.65
POLR2J4-204ENST00000418424 SOCS7O14512 581 aa4.7□□□□□ -1.66
POLR2J4-204ENST00000418424 ST18O60284 1047 aa4.7□□□□□ -1.66
POLR2J4-204ENST00000418424 PCDHB8Q9UN66 801 aa4.7□□□□□ -1.66
POLR2J4-204ENST00000418424 IRX5P78411 483 aaPredicted RBP4.69□□□□□ -1.66
POLR2J4-204ENST00000418424 KLHL34Q8N239 644 aa4.69□□□□□ -1.66
POLR2J4-204ENST00000418424 OCEL1Q9H607 264 aa4.69□□□□□ -1.66
POLR2J4-204ENST00000418424 ILDR2Q71H61 639 aa4.68□□□□□ -1.66
POLR2J4-204ENST00000418424 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.68□□□□□ -1.66
POLR2J4-204ENST00000418424 FBXO3Q9UK99 471 aa4.68□□□□□ -1.66
POLR2J4-204ENST00000418424 SNPHO15079 494 aa4.67□□□□□ -1.66
POLR2J4-204ENST00000418424 GOLGA2Q08379 1002 aa4.67□□□□□ -1.66
POLR2J4-204ENST00000418424 MKRN3Q13064 507 aaKnown RBP4.65□□□□□ -1.67
POLR2J4-204ENST00000418424 GSE1Q14687 1217 aa4.64□□□□□ -1.67
POLR2J4-204ENST00000418424 C3orf67Q6ZVT6 689 aa4.64□□□□□ -1.67
POLR2J4-204ENST00000418424 MARVELD3Q96A59 401 aa4.64□□□□□ -1.67
POLR2J4-204ENST00000418424 ZNF467Q7Z7K2 595 aaPredicted RBP4.63□□□□□ -1.67
POLR2J4-204ENST00000418424 TMEM121BQ9BXQ6 578 aaPredicted RBP4.63□□□□□ -1.67
POLR2J4-204ENST00000418424 LMTK3Q96Q04 1460 aa4.62□□□□□ -1.67
POLR2J4-204ENST00000418424 L3MBTL3Q96JM7 780 aaPredicted RBP4.62□□□□□ -1.67
POLR2J4-204ENST00000418424 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.62□□□□□ -1.67
POLR2J4-204ENST00000418424 EMP3P54852 163 aa4.61□□□□□ -1.67
POLR2J4-204ENST00000418424 PSEN1P49768 467 aa4.6□□□□□ -1.67
POLR2J4-204ENST00000418424 VASPP50552 380 aaPredicted RBP4.6□□□□□ -1.67
POLR2J4-204ENST00000418424 MMRN1Q13201 1228 aa4.6□□□□□ -1.67
POLR2J4-204ENST00000418424 SPNS2Q8IVW8 549 aa4.6□□□□□ -1.67
POLR2J4-204ENST00000418424 PDCD7Q8N8D1 485 aaKnown RBP4.6□□□□□ -1.67
POLR2J4-204ENST00000418424 G3V3G9 751 aa4.59□□□□□ -1.67
POLR2J4-204ENST00000418424 CIZ1Q9ULV3 898 aaPredicted RBP4.58□□□□□ -1.68
POLR2J4-204ENST00000418424 FAM205CA6NFA0 338 aa4.57□□□□□ -1.68
POLR2J4-204ENST00000418424 CHRM1P11229 460 aaPredicted RBP4.57□□□□□ -1.68
POLR2J4-204ENST00000418424 PDAP1Q13442 181 aaKnown RBP4.56□□□□□ -1.68
POLR2J4-204ENST00000418424 CABP2Q9NPB3 220 aa4.56□□□□□ -1.68
POLR2J4-204ENST00000418424 DPY19L2Q6NUT2 758 aa4.55□□□□□ -1.68
POLR2J4-204ENST00000418424 SPOCK2Q92563 424 aa4.55□□□□□ -1.68
POLR2J4-204ENST00000418424 HS3ST6Q96QI5 342 aa4.55□□□□□ -1.68
POLR2J4-204ENST00000418424 ZNF710Q8N1W2 664 aa4.54□□□□□ -1.68
POLR2J4-204ENST00000418424 BOLA1Q9Y3E2 137 aa4.54□□□□□ -1.68
POLR2J4-204ENST00000418424 POTEB3A0JP26 581 aa4.52□□□□□ -1.69
POLR2J4-204ENST00000418424 POTEBQ6S5H4 581 aa4.52□□□□□ -1.69
POLR2J4-204ENST00000418424 KRTAP3-3Q9BYR6 98 aa4.51□□□□□ -1.69
POLR2J4-204ENST00000418424 KRTAP3-2Q9BYR7 98 aa4.51□□□□□ -1.69
POLR2J4-204ENST00000418424 ERBB3P21860 1342 aa4.5□□□□□ -1.69
POLR2J4-204ENST00000418424 IFNLR1Q8IU57 520 aaPredicted RBP4.5□□□□□ -1.69
POLR2J4-204ENST00000418424 HOXB3P14651 431 aaPredicted RBP4.49□□□□□ -1.69
POLR2J4-204ENST00000418424 DOK7Q18PE1 504 aa4.49□□□□□ -1.69
POLR2J4-204ENST00000418424 RIMBP2O15034 1052 aa4.48□□□□□ -1.69
POLR2J4-204ENST00000418424 HOXB1P14653 301 aaPredicted RBP4.47□□□□□ -1.69
POLR2J4-204ENST00000418424 EFCAB3Q8N7B9 438 aa4.47□□□□□ -1.69
POLR2J4-204ENST00000418424 VARS2Q5ST30 1063 aaKnown RBP4.46□□□□□ -1.7
POLR2J4-204ENST00000418424 RNF166Q96A37 237 aaPredicted RBP4.44□□□□□ -1.7
POLR2J4-204ENST00000418424 MICALL2Q8IY33 904 aa4.43□□□□□ -1.7
POLR2J4-204ENST00000418424 RIOK3O14730 519 aaKnown RBP4.42□□□□□ -1.7
POLR2J4-204ENST00000418424 MYT1LQ9UL68 1186 aa4.42□□□□□ -1.7
POLR2J4-204ENST00000418424 SOX12O15370 315 aa4.41□□□□□ -1.7
POLR2J4-204ENST00000418424 ZSWIM6Q9HCJ5 1215 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms