RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 RGL3Q3MIN7 710 aa14.32□□□□□ -0.12
COL12A1-203ENST00000416123 DCAF1Q9Y4B6 1507 aa14.31□□□□□ -0.12
COL12A1-203ENST00000416123 PPP1R15AO75807 674 aaPredicted RBP14.3□□□□□ -0.12
COL12A1-203ENST00000416123 IRX6P78412 446 aaPredicted RBP14.29□□□□□ -0.12
COL12A1-203ENST00000416123 MYO15BQ96JP2 1530 aa14.28□□□□□ -0.12
COL12A1-203ENST00000416123 MRS2Q9HD23 443 aa14.26□□□□□ -0.13
COL12A1-203ENST00000416123 NACADO15069 1562 aa14.26□□□□□ -0.13
COL12A1-203ENST00000416123 PLEKHD1A6NEE1 506 aa14.24□□□□□ -0.13
COL12A1-203ENST00000416123 UPF2Q9HAU5 1272 aaKnown RBP14.23□□□□□ -0.13
COL12A1-203ENST00000416123 CCDC136Q96JN2 1154 aa14.21□□□□□ -0.13
COL12A1-203ENST00000416123 ARXQ96QS3 562 aa14.21□□□□□ -0.13
COL12A1-203ENST00000416123 GOLGA3Q08378 1498 aa14.21□□□□□ -0.13
COL12A1-203ENST00000416123 EIF4G1Q04637 1599 aaKnown RBP14.21□□□□□ -0.13
COL12A1-203ENST00000416123 PPM1GO15355 546 aaPredicted RBP14.2□□□□□ -0.14
COL12A1-203ENST00000416123 RSF1Q96T23 1441 aaPredicted RBP14.2□□□□□ -0.14
COL12A1-203ENST00000416123 CEP162Q5TB80 1403 aa14.19□□□□□ -0.14
COL12A1-203ENST00000416123 HAP1P54257 671 aaPredicted RBP14.18□□□□□ -0.14
COL12A1-203ENST00000416123 WRNQ14191 1432 aaPredicted RBP eCLIP14.17□□□□□ -0.14
COL12A1-203ENST00000416123 EIF4G2P78344 907 aaKnown RBP eCLIP14.17□□□□□ -0.14
COL12A1-203ENST00000416123 MIER1Q8N108 512 aa14.17□□□□□ -0.14
COL12A1-203ENST00000416123 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.17□□□□□ -0.14
COL12A1-203ENST00000416123 CFDP1Q9UEE9 299 aaPredicted RBP14.16□□□□□ -0.14
COL12A1-203ENST00000416123 NBR1Q14596 966 aa14.16□□□□□ -0.14
COL12A1-203ENST00000416123 ANP32BQ92688 251 aaKnown RBP14.13□□□□□ -0.15
COL12A1-203ENST00000416123 KIF27Q86VH2 1401 aa14.13□□□□□ -0.15
COL12A1-203ENST00000416123 LMOD2Q6P5Q4 547 aa14.12□□□□□ -0.15
COL12A1-203ENST00000416123 TRHP20396 242 aaPredicted RBP14.12□□□□□ -0.15
COL12A1-203ENST00000416123 MYH16Q9H6N6 1097 aa14.11□□□□□ -0.15
COL12A1-203ENST00000416123 TNNT2P45379 298 aaPredicted RBP14.1□□□□□ -0.15
COL12A1-203ENST00000416123 LAS1LQ9Y4W2 734 aaKnown RBP14.09□□□□□ -0.15
COL12A1-203ENST00000416123 MLECQ14165 292 aa14.09□□□□□ -0.15
COL12A1-203ENST00000416123 NEUROD2Q15784 382 aa14.06□□□□□ -0.16
COL12A1-203ENST00000416123 CARD11Q9BXL7 1154 aa14.06□□□□□ -0.16
COL12A1-203ENST00000416123 BAZ1AQ9NRL2 1556 aaPredicted RBP14.04□□□□□ -0.16
COL12A1-203ENST00000416123 KNSTRNQ9Y448 316 aa14.04□□□□□ -0.16
COL12A1-203ENST00000416123 CEP164Q9UPV0 1460 aa14.03□□□□□ -0.16
COL12A1-203ENST00000416123 SIN3AQ96ST3 1273 aa14.03□□□□□ -0.16
COL12A1-203ENST00000416123 POGKQ9P215 609 aa14.03□□□□□ -0.16
COL12A1-203ENST00000416123 CECR2Q9BXF3 1484 aa14.03□□□□□ -0.16
COL12A1-203ENST00000416123 ABCC8Q09428 1581 aa14.02□□□□□ -0.16
COL12A1-203ENST00000416123 CC2D1BQ5T0F9 858 aaKnown RBP14.01□□□□□ -0.17
COL12A1-203ENST00000416123 EEA1Q15075 1411 aa14.01□□□□□ -0.17
COL12A1-203ENST00000416123 TPRNQ4KMQ1 711 aa14.01□□□□□ -0.17
COL12A1-203ENST00000416123 SOX12O15370 315 aa14□□□□□ -0.17
COL12A1-203ENST00000416123 EIF5BO60841 1220 aaKnown RBP14□□□□□ -0.17
COL12A1-203ENST00000416123 CUX2O14529 1486 aa13.99□□□□□ -0.17
COL12A1-203ENST00000416123 CFAP53Q96M91 514 aa13.99□□□□□ -0.17
COL12A1-203ENST00000416123 SAFB2Q14151 953 aaKnown RBP eCLIP13.97□□□□□ -0.17
COL12A1-203ENST00000416123 TAOK2Q9UL54 1235 aa13.97□□□□□ -0.17
COL12A1-203ENST00000416123 WIZO95785 1651 aa13.96□□□□□ -0.17
COL12A1-203ENST00000416123 FTSJ3Q8IY81 847 aaKnown RBP13.96□□□□□ -0.18
COL12A1-203ENST00000416123 CCNB3Q8WWL7 1395 aa13.96□□□□□ -0.18
COL12A1-203ENST00000416123 NPHP1O15259 732 aa13.94□□□□□ -0.18
COL12A1-203ENST00000416123 TULP1O00294 542 aaPredicted RBP13.94□□□□□ -0.18
COL12A1-203ENST00000416123 DCAF11Q8TEB1 546 aa13.94□□□□□ -0.18
COL12A1-203ENST00000416123 TNIKQ9UKE5 1360 aa13.93□□□□□ -0.18
COL12A1-203ENST00000416123 U2SURPO15042 1029 aaKnown RBP13.93□□□□□ -0.18
COL12A1-203ENST00000416123 SOGA1O94964 1423 aa13.93□□□□□ -0.18
COL12A1-203ENST00000416123 SUPT16HQ9Y5B9 1047 aaKnown RBP13.93□□□□□ -0.18
COL12A1-203ENST00000416123 CDCA8Q53HL2 280 aa13.93□□□□□ -0.18
COL12A1-203ENST00000416123 CARMIL1Q5VZK9 1371 aa13.92□□□□□ -0.18
COL12A1-203ENST00000416123 MAPK8IP3Q9UPT6 1336 aa13.91□□□□□ -0.18
COL12A1-203ENST00000416123 FOXD1Q16676 465 aa13.91□□□□□ -0.18
COL12A1-203ENST00000416123 FRAT1Q92837 279 aaPredicted RBP13.9□□□□□ -0.18
COL12A1-203ENST00000416123 STK26Q9P289 416 aa13.9□□□□□ -0.18
COL12A1-203ENST00000416123 GGT6Q6P531 493 aa13.89□□□□□ -0.19
COL12A1-203ENST00000416123 SRPK2P78362 688 aaKnown RBP13.88□□□□□ -0.19
COL12A1-203ENST00000416123 KANK1Q14678 1352 aa13.88□□□□□ -0.19
COL12A1-203ENST00000416123 CCDC88BA6NC98 1476 aa13.87□□□□□ -0.19
COL12A1-203ENST00000416123 MROH2BQ7Z745 1585 aa13.87□□□□□ -0.19
COL12A1-203ENST00000416123 FHAD1B1AJZ9 1412 aa13.86□□□□□ -0.19
COL12A1-203ENST00000416123 NCLP19338 710 aaKnown RBP13.84□□□□□ -0.19
COL12A1-203ENST00000416123 NUDCQ9Y266 331 aa13.84□□□□□ -0.19
COL12A1-203ENST00000416123 BECN1Q14457 450 aa13.82□□□□□ -0.2
COL12A1-203ENST00000416123 CASC1Q6TDU7 716 aa13.82□□□□□ -0.2
COL12A1-203ENST00000416123 CDK11BP21127 795 aaKnown RBP13.82□□□□□ -0.2
COL12A1-203ENST00000416123 OS9Q13438 667 aaPredicted RBP13.82□□□□□ -0.2
COL12A1-203ENST00000416123 ARHGAP35Q9NRY4 1499 aa13.82□□□□□ -0.2
COL12A1-203ENST00000416123 RGS3P49796 1198 aa13.81□□□□□ -0.2
COL12A1-203ENST00000416123 PAK3O75914 559 aaPredicted RBP13.81□□□□□ -0.2
COL12A1-203ENST00000416123 TMF1P82094 1093 aa13.8□□□□□ -0.2
COL12A1-203ENST00000416123 SMARCA2P51531 1590 aa13.8□□□□□ -0.2
COL12A1-203ENST00000416123 TDRD9Q8NDG6 1382 aaKnown RBP13.79□□□□□ -0.2
COL12A1-203ENST00000416123 DDRGK1Q96HY6 314 aa13.77□□□□□ -0.2
COL12A1-203ENST00000416123 NUTM2DQ5VT03 806 aaPredicted RBP13.77□□□□□ -0.2
COL12A1-203ENST00000416123 NAP1L2Q9ULW6 460 aaPredicted RBP13.77□□□□□ -0.21
COL12A1-203ENST00000416123 KANK4Q5T7N3 995 aaPredicted RBP13.76□□□□□ -0.21
COL12A1-203ENST00000416123 PKD2Q13563 968 aa13.76□□□□□ -0.21
COL12A1-203ENST00000416123 MORC1Q86VD1 984 aa13.75□□□□□ -0.21
COL12A1-203ENST00000416123 GOLGA2Q08379 1002 aa13.74□□□□□ -0.21
COL12A1-203ENST00000416123 PDS5BQ9NTI5 1447 aa13.74□□□□□ -0.21
COL12A1-203ENST00000416123 HDGFP51858 240 aaKnown RBP13.74□□□□□ -0.21
COL12A1-203ENST00000416123 CARMIL2Q6F5E8 1435 aa13.74□□□□□ -0.21
COL12A1-203ENST00000416123 HNRNPMP52272 730 aaKnown RBP eCLIP13.72□□□□□ -0.21
COL12A1-203ENST00000416123 B4GALNT3Q6L9W6 998 aa13.72□□□□□ -0.21
COL12A1-203ENST00000416123 SETD5Q9C0A6 1442 aa13.72□□□□□ -0.21
COL12A1-203ENST00000416123 PRDM2Q13029 1718 aa13.72□□□□□ -0.21
COL12A1-203ENST00000416123 PNNQ9H307 717 aaKnown RBP13.71□□□□□ -0.21
COL12A1-203ENST00000416123 GOLGA6L22H0YM25 854 aa13.71□□□□□ -0.21
COL12A1-203ENST00000416123 ZRSR1Q15695 479 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms