RNA–Protein interactions for RNA: ENST00000413366.7

PRKCA-202, Transcript of protein kinase C alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCA, Length 8,751 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-202ENST00000413366 UPF2Q9HAU5 1272 aaKnown RBP10.09□□□□□ -0.79
PRKCA-202ENST00000413366 LMOD2Q6P5Q4 547 aa10.08□□□□□ -0.8
PRKCA-202ENST00000413366 PLEKHD1A6NEE1 506 aa10.07□□□□□ -0.8
PRKCA-202ENST00000413366 WDR43Q15061 677 aaKnown RBP eCLIP10.07□□□□□ -0.8
PRKCA-202ENST00000413366 KDM2AQ9Y2K7 1162 aa10.06□□□□□ -0.8
PRKCA-202ENST00000413366 MTUS2Q5JR59 1369 aa10.06□□□□□ -0.8
PRKCA-202ENST00000413366 AEBP2Q6ZN18 517 aaPredicted RBP10.06□□□□□ -0.8
PRKCA-202ENST00000413366 MYH16Q9H6N6 1097 aa10.05□□□□□ -0.8
PRKCA-202ENST00000413366 NBR1Q14596 966 aa10.04□□□□□ -0.8
PRKCA-202ENST00000413366 TRIM44Q96DX7 344 aaPredicted RBP10.03□□□□□ -0.8
PRKCA-202ENST00000413366 TMC1Q8TDI8 760 aa10.01□□□□□ -0.81
PRKCA-202ENST00000413366 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.99□□□□□ -0.81
PRKCA-202ENST00000413366 BAZ1BQ9UIG0 1483 aaKnown RBP9.99□□□□□ -0.81
PRKCA-202ENST00000413366 HDGFP51858 240 aaKnown RBP9.98□□□□□ -0.81
PRKCA-202ENST00000413366 MLECQ14165 292 aa9.97□□□□□ -0.81
PRKCA-202ENST00000413366 RSF1Q96T23 1441 aaPredicted RBP9.97□□□□□ -0.81
PRKCA-202ENST00000413366 TULP1O00294 542 aaPredicted RBP9.96□□□□□ -0.82
PRKCA-202ENST00000413366 POGKQ9P215 609 aa9.96□□□□□ -0.82
PRKCA-202ENST00000413366 SALL2Q9Y467 1007 aaPredicted RBP9.95□□□□□ -0.82
PRKCA-202ENST00000413366 FKBP8Q14318 412 aa9.95□□□□□ -0.82
PRKCA-202ENST00000413366 PPM1GO15355 546 aaPredicted RBP9.94□□□□□ -0.82
PRKCA-202ENST00000413366 NACADO15069 1562 aa9.94□□□□□ -0.82
PRKCA-202ENST00000413366 RSPH6AQ9H0K4 717 aa9.94□□□□□ -0.82
PRKCA-202ENST00000413366 EIF4G1Q04637 1599 aaKnown RBP9.93□□□□□ -0.82
PRKCA-202ENST00000413366 KANK1Q14678 1352 aa9.93□□□□□ -0.82
PRKCA-202ENST00000413366 CFAP53Q96M91 514 aa9.92□□□□□ -0.82
PRKCA-202ENST00000413366 GOLGA2Q08379 1002 aa9.92□□□□□ -0.82
PRKCA-202ENST00000413366 FAM9BQ8IZU0 186 aa9.92□□□□□ -0.82
PRKCA-202ENST00000413366 DEKP35659 375 aaKnown RBP9.91□□□□□ -0.82
PRKCA-202ENST00000413366 EIF4G2P78344 907 aaKnown RBP eCLIP9.9□□□□□ -0.823e-7■■■■□ 22
PRKCA-202ENST00000413366 CFDP1Q9UEE9 299 aaPredicted RBP9.9□□□□□ -0.82
PRKCA-202ENST00000413366 TMX4Q9H1E5 349 aaPredicted RBP9.9□□□□□ -0.82
PRKCA-202ENST00000413366 PKNOX2Q96KN3 472 aa9.9□□□□□ -0.83
PRKCA-202ENST00000413366 CCDC9Q9Y3X0 531 aaKnown RBP9.89□□□□□ -0.83
PRKCA-202ENST00000413366 RRP7BPQ9NSQ0 103 aa9.89□□□□□ -0.83
PRKCA-202ENST00000413366 RGL3Q3MIN7 710 aa9.89□□□□□ -0.83
PRKCA-202ENST00000413366 CDCA8Q53HL2 280 aa9.89□□□□□ -0.83
PRKCA-202ENST00000413366 DDRGK1Q96HY6 314 aa9.88□□□□□ -0.83
PRKCA-202ENST00000413366 NAP1L5Q96NT1 182 aaPredicted RBP9.87□□□□□ -0.83
PRKCA-202ENST00000413366 ZCCHC6Q5VYS8 1495 aaKnown RBP9.87□□□□□ -0.83
PRKCA-202ENST00000413366 PODXL2Q9NZ53 605 aa9.87□□□□□ -0.83
PRKCA-202ENST00000413366 CLIP1P30622 1438 aa9.86□□□□□ -0.83
PRKCA-202ENST00000413366 BECN1Q14457 450 aa9.85□□□□□ -0.83
PRKCA-202ENST00000413366 GOLGA6L22H0YM25 854 aa9.84□□□□□ -0.83
PRKCA-202ENST00000413366 CASC1Q6TDU7 716 aa9.84□□□□□ -0.83
PRKCA-202ENST00000413366 LAS1LQ9Y4W2 734 aaKnown RBP9.84□□□□□ -0.83
PRKCA-202ENST00000413366 CCDC136Q96JN2 1154 aa9.84□□□□□ -0.83
PRKCA-202ENST00000413366 MAPK8IP3Q9UPT6 1336 aa9.84□□□□□ -0.83
PRKCA-202ENST00000413366 DNTTIP2Q5QJE6 756 aaKnown RBP9.83□□□□□ -0.84
PRKCA-202ENST00000413366 NOP58Q9Y2X3 529 aaKnown RBP9.83□□□□□ -0.84
PRKCA-202ENST00000413366 HNRNPUQ00839 825 aaKnown RBP eCLIP9.83□□□□□ -0.848e-8■■■■□ 25.4
PRKCA-202ENST00000413366 PTMSP20962 102 aa9.83□□□□□ -0.84
PRKCA-202ENST00000413366 KNSTRNQ9Y448 316 aa9.83□□□□□ -0.84
PRKCA-202ENST00000413366 PTMAP06454 111 aaKnown RBP9.82□□□□□ -0.84
PRKCA-202ENST00000413366 KIF27Q86VH2 1401 aa9.81□□□□□ -0.84
PRKCA-202ENST00000413366 NUDCQ9Y266 331 aa9.81□□□□□ -0.84
PRKCA-202ENST00000413366 OS9Q13438 667 aaPredicted RBP9.81□□□□□ -0.84
PRKCA-202ENST00000413366 CSB-PGBD3P0DP91 1061 aa9.81□□□□□ -0.84
PRKCA-202ENST00000413366 MEX3CQ5U5Q3 659 aaKnown RBP9.81□□□□□ -0.84
PRKCA-202ENST00000413366 PNNQ9H307 717 aaKnown RBP9.8□□□□□ -0.84
PRKCA-202ENST00000413366 USP35Q9P2H5 1018 aa9.8□□□□□ -0.84
PRKCA-202ENST00000413366 PAK3O75914 559 aaPredicted RBP9.8□□□□□ -0.84
PRKCA-202ENST00000413366 CLSTN1O94985 981 aa9.8□□□□□ -0.84
PRKCA-202ENST00000413366 ZRSR1Q15695 479 aaKnown RBP9.79□□□□□ -0.84
PRKCA-202ENST00000413366 ISY1Q9ULR0 285 aaKnown RBP9.79□□□□□ -0.84
PRKCA-202ENST00000413366 UBE2Q2Q8WVN8 375 aa9.79□□□□□ -0.84
PRKCA-202ENST00000413366 SUPT16HQ9Y5B9 1047 aaKnown RBP9.78□□□□□ -0.84
PRKCA-202ENST00000413366 SOX12O15370 315 aa9.78□□□□□ -0.84
PRKCA-202ENST00000413366 DCAF8L1A6NGE4 600 aa9.78□□□□□ -0.84
PRKCA-202ENST00000413366 CCNB3Q8WWL7 1395 aa9.78□□□□□ -0.84
PRKCA-202ENST00000413366 DDX10Q13206 875 aaKnown RBP9.78□□□□□ -0.84
PRKCA-202ENST00000413366 FTSJ3Q8IY81 847 aaKnown RBP9.77□□□□□ -0.84
PRKCA-202ENST00000413366 MRS2Q9HD23 443 aa9.77□□□□□ -0.84
PRKCA-202ENST00000413366 CARMIL2Q6F5E8 1435 aa9.77□□□□□ -0.85
PRKCA-202ENST00000413366 TAOK2Q9UL54 1235 aa9.77□□□□□ -0.85
PRKCA-202ENST00000413366 G3V3G9 751 aa9.76□□□□□ -0.85
PRKCA-202ENST00000413366 DCAF8Q5TAQ9 597 aa9.76□□□□□ -0.85
PRKCA-202ENST00000413366 EID1Q9Y6B2 187 aa9.76□□□□□ -0.85
PRKCA-202ENST00000413366 SRPK2P78362 688 aaKnown RBP9.76□□□□□ -0.85
PRKCA-202ENST00000413366 NCBP3Q53F19 620 aaKnown RBP9.76□□□□□ -0.85
PRKCA-202ENST00000413366 GOLGA3Q08378 1498 aa9.76□□□□□ -0.85
PRKCA-202ENST00000413366 PDS5BQ9NTI5 1447 aa9.75□□□□□ -0.85
PRKCA-202ENST00000413366 L1TD1Q5T7N2 865 aaKnown RBP9.75□□□□□ -0.85
PRKCA-202ENST00000413366 GGT6Q6P531 493 aa9.75□□□□□ -0.85
PRKCA-202ENST00000413366 HSP90AA2PQ14568 343 aaPredicted RBP9.75□□□□□ -0.85
PRKCA-202ENST00000413366 MIER1Q8N108 512 aa9.75□□□□□ -0.85
PRKCA-202ENST00000413366 PHF23Q9BUL5 403 aaPredicted RBP9.75□□□□□ -0.85
PRKCA-202ENST00000413366 GOLGA6L6A8MZA4 724 aa9.74□□□□□ -0.85
PRKCA-202ENST00000413366 CARD11Q9BXL7 1154 aa9.74□□□□□ -0.85
PRKCA-202ENST00000413366 RBM19Q9Y4C8 960 aaKnown RBP9.74□□□□□ -0.85
PRKCA-202ENST00000413366 AMER1Q5JTC6 1135 aaPredicted RBP9.74□□□□□ -0.85
PRKCA-202ENST00000413366 CHAF1AQ13111 956 aaPredicted RBP9.74□□□□□ -0.85
PRKCA-202ENST00000413366 WRNQ14191 1432 aaPredicted RBP eCLIP9.73□□□□□ -0.85
PRKCA-202ENST00000413366 RTN4Q9NQC3 1192 aaKnown RBP9.73□□□□□ -0.85
PRKCA-202ENST00000413366 U2SURPO15042 1029 aaKnown RBP9.72□□□□□ -0.85
PRKCA-202ENST00000413366 RTF1Q92541 710 aaKnown RBP9.72□□□□□ -0.85
PRKCA-202ENST00000413366 ZNF330Q9Y3S2 320 aaPredicted RBP9.72□□□□□ -0.85
PRKCA-202ENST00000413366 VSIG10Q8N0Z9 540 aa9.72□□□□□ -0.85
PRKCA-202ENST00000413366 FGD1P98174 961 aa9.71□□□□□ -0.85
PRKCA-202ENST00000413366 NAP1L2Q9ULW6 460 aaPredicted RBP9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms