RNA–Protein interactions for RNA: ENST00000412870.1

CASKP1-201, Transcript of calcium/calmodulin dependent serine protein kinase pseudogene 1, humanhuman

BASIC

Gene CASKP1, Length 582 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASKP1-201ENST00000412870 PAK3O75914 559 aaPredicted RBP16.02■□□□□ 0.16
CASKP1-201ENST00000412870 NPM1P06748 294 aaKnown RBP eCLIP15.94■□□□□ 0.14
CASKP1-201ENST00000412870 MS4A3Q96HJ5 214 aa15.93■□□□□ 0.14
CASKP1-201ENST00000412870 VASPP50552 380 aaPredicted RBP15.9■□□□□ 0.14
CASKP1-201ENST00000412870 POTEJP0CG39 1038 aa15.86■□□□□ 0.13
CASKP1-201ENST00000412870 ASTLQ6HA08 431 aaPredicted RBP15.85■□□□□ 0.13
CASKP1-201ENST00000412870 POTEMA6NI47 508 aa15.84■□□□□ 0.13
CASKP1-201ENST00000412870 ATMINO43313 823 aaPredicted RBP15.84■□□□□ 0.13
CASKP1-201ENST00000412870 METRNQ9UJH8 293 aa15.84■□□□□ 0.13
CASKP1-201ENST00000412870 POTEGQ6S5H5 508 aa15.79■□□□□ 0.12
CASKP1-201ENST00000412870 TSPYL2Q9H2G4 693 aaPredicted RBP15.78■□□□□ 0.12
CASKP1-201ENST00000412870 IFNLR1Q8IU57 520 aaPredicted RBP15.76■□□□□ 0.11
CASKP1-201ENST00000412870 SLC39A7Q92504 469 aa15.74■□□□□ 0.11
CASKP1-201ENST00000412870 CCDC61Q9Y6R9 512 aa15.73■□□□□ 0.11
CASKP1-201ENST00000412870 C7P10643 843 aa15.72■□□□□ 0.11
CASKP1-201ENST00000412870 ATN1P54259 1190 aaPredicted RBP15.71■□□□□ 0.11
CASKP1-201ENST00000412870 TRPC6Q9Y210 931 aa15.68■□□□□ 0.1
CASKP1-201ENST00000412870 LCE2DQ5TA82 110 aaPredicted RBP15.66■□□□□ 0.1
CASKP1-201ENST00000412870 KIF12Q96FN5 646 aa15.65■□□□□ 0.1
CASKP1-201ENST00000412870 POTEFA5A3E0 1075 aa15.63■□□□□ 0.09
CASKP1-201ENST00000412870 BMP2KQ9NSY1 1161 aaPredicted RBP15.6■□□□□ 0.09
CASKP1-201ENST00000412870 MAP3K13O43283 966 aa15.55■□□□□ 0.08
CASKP1-201ENST00000412870 MAMSTRQ6ZN01 415 aa15.55■□□□□ 0.08
CASKP1-201ENST00000412870 RASEFQ8IZ41 740 aa15.55■□□□□ 0.08
CASKP1-201ENST00000412870 FAM163AQ96GL9 167 aaPredicted RBP15.52■□□□□ 0.08
CASKP1-201ENST00000412870 PKD2Q13563 968 aa15.51■□□□□ 0.07
CASKP1-201ENST00000412870 SCUBE2Q9NQ36 999 aa15.49■□□□□ 0.07
CASKP1-201ENST00000412870 MIER1Q8N108 512 aa15.46■□□□□ 0.07
CASKP1-201ENST00000412870 COLQQ9Y215 455 aaPredicted RBP15.46■□□□□ 0.07
CASKP1-201ENST00000412870 TIE1P35590 1138 aa15.45■□□□□ 0.06
CASKP1-201ENST00000412870 PCDH10Q9P2E7 1040 aa15.43■□□□□ 0.06
CASKP1-201ENST00000412870 TTLL13PA6NNM8 815 aa15.42■□□□□ 0.06
CASKP1-201ENST00000412870 KLHL34Q8N239 644 aa15.42■□□□□ 0.06
CASKP1-201ENST00000412870 SPOCK2Q92563 424 aa15.41■□□□□ 0.06
CASKP1-201ENST00000412870 DCAF8L2P0C7V8 631 aa15.36■□□□□ 0.05
CASKP1-201ENST00000412870 PLCD3Q8N3E9 789 aa15.36■□□□□ 0.05
CASKP1-201ENST00000412870 PLEKHG5O94827 1062 aa15.34■□□□□ 0.05
CASKP1-201ENST00000412870 PLCB2Q00722 1185 aa15.33■□□□□ 0.04
CASKP1-201ENST00000412870 SEC24BO95487 1268 aa15.32■□□□□ 0.04
CASKP1-201ENST00000412870 TRIM35Q9UPQ4 493 aa15.32■□□□□ 0.04
CASKP1-201ENST00000412870 PCDHB13Q9Y5F0 798 aa15.3■□□□□ 0.04
CASKP1-201ENST00000412870 NUBP1P53384 320 aa15.27■□□□□ 0.04
CASKP1-201ENST00000412870 IFNL1Q8IU54 200 aa15.24■□□□□ 0.03
CASKP1-201ENST00000412870 ECM2O94769 699 aaPredicted RBP15.23■□□□□ 0.03
CASKP1-201ENST00000412870 IER5LQ5T953 404 aa15.21■□□□□ 0.03
CASKP1-201ENST00000412870 SGIP1Q9BQI5 828 aa15.21■□□□□ 0.03
CASKP1-201ENST00000412870 CDAN1Q8IWY9 1227 aa15.18■□□□□ 0.02
CASKP1-201ENST00000412870 TMEM106CQ9BVX2 250 aa15.16■□□□□ 0.02
CASKP1-201ENST00000412870 SLAIN1Q8ND83 568 aa15.15■□□□□ 0.02
CASKP1-201ENST00000412870 ST18O60284 1047 aa15.13■□□□□ 0.01
CASKP1-201ENST00000412870 RGL2O15211 777 aa15.12■□□□□ 0.01
CASKP1-201ENST00000412870 HAP1P54257 671 aaPredicted RBP15.11■□□□□ 0.01
CASKP1-201ENST00000412870 FAM212AQ96EL1 285 aa15.08■□□□□ 0
CASKP1-201ENST00000412870 ZBTB47Q9UFB7 747 aaPredicted RBP15.08■□□□□ 0
CASKP1-201ENST00000412870 IRX5P78411 483 aaPredicted RBP15.07■□□□□ 0
CASKP1-201ENST00000412870 PLCG2P16885 1265 aa15.06■□□□□ 0
CASKP1-201ENST00000412870 CIZ1Q9ULV3 898 aaPredicted RBP15.05■□□□□ -0
CASKP1-201ENST00000412870 BBXQ8WY36 941 aaPredicted RBP15.02■□□□□ -0
CASKP1-201ENST00000412870 PYGBP11216 843 aa14.99□□□□□ -0.01
CASKP1-201ENST00000412870 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.95□□□□□ -0.02
CASKP1-201ENST00000412870 PCDHB8Q9UN66 801 aa14.95□□□□□ -0.02
CASKP1-201ENST00000412870 DCAF8Q5TAQ9 597 aa14.93□□□□□ -0.02
CASKP1-201ENST00000412870 OCEL1Q9H607 264 aa14.93□□□□□ -0.02
CASKP1-201ENST00000412870 PAXIP1Q6ZW49 1069 aaPredicted RBP14.91□□□□□ -0.02
CASKP1-201ENST00000412870 TRIM41Q8WV44 630 aa14.89□□□□□ -0.03
CASKP1-201ENST00000412870 VSIG10Q8N0Z9 540 aa14.87□□□□□ -0.03
CASKP1-201ENST00000412870 MARVELD3Q96A59 401 aa14.87□□□□□ -0.03
CASKP1-201ENST00000412870 CFAP44Q96MT7 982 aa14.87□□□□□ -0.03
CASKP1-201ENST00000412870 CHGAP10645 457 aaKnown RBP14.85□□□□□ -0.03
CASKP1-201ENST00000412870 GSE1Q14687 1217 aa14.84□□□□□ -0.03
CASKP1-201ENST00000412870 MMRN1Q13201 1228 aa14.83□□□□□ -0.04
CASKP1-201ENST00000412870 RNF25Q96BH1 459 aaPredicted RBP14.83□□□□□ -0.04
CASKP1-201ENST00000412870 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.83□□□□□ -0.04
CASKP1-201ENST00000412870 SPNS2Q8IVW8 549 aa14.82□□□□□ -0.04
CASKP1-201ENST00000412870 PDCD7Q8N8D1 485 aaKnown RBP14.81□□□□□ -0.04
CASKP1-201ENST00000412870 TMEM121BQ9BXQ6 578 aaPredicted RBP14.81□□□□□ -0.04
CASKP1-201ENST00000412870 KDM2AQ9Y2K7 1162 aa14.78□□□□□ -0.04
CASKP1-201ENST00000412870 SPRYD3Q8NCJ5 442 aa14.77□□□□□ -0.05
CASKP1-201ENST00000412870 HS6ST3Q8IZP7 471 aa14.75□□□□□ -0.05
CASKP1-201ENST00000412870 SNPHO15079 494 aa14.74□□□□□ -0.05
CASKP1-201ENST00000412870 TSHZ2Q9NRE2 1034 aa14.7□□□□□ -0.06
CASKP1-201ENST00000412870 POTEB3A0JP26 581 aa14.68□□□□□ -0.06
CASKP1-201ENST00000412870 POTEBQ6S5H4 581 aa14.68□□□□□ -0.06
CASKP1-201ENST00000412870 RIOK3O14730 519 aaKnown RBP14.67□□□□□ -0.06
CASKP1-201ENST00000412870 C3orf67Q6ZVT6 689 aa14.67□□□□□ -0.06
CASKP1-201ENST00000412870 BCANQ96GW7 911 aa14.66□□□□□ -0.06
CASKP1-201ENST00000412870 MKRN3Q13064 507 aaKnown RBP14.65□□□□□ -0.06
CASKP1-201ENST00000412870 ZNF467Q7Z7K2 595 aaPredicted RBP14.65□□□□□ -0.06
CASKP1-201ENST00000412870 EMP3P54852 163 aa14.64□□□□□ -0.07
CASKP1-201ENST00000412870 DNAJC5Q9H3Z4 198 aa14.64□□□□□ -0.07
CASKP1-201ENST00000412870 GOLGA2Q08379 1002 aa14.62□□□□□ -0.07
CASKP1-201ENST00000412870 KRTAP3-3Q9BYR6 98 aa14.62□□□□□ -0.07
CASKP1-201ENST00000412870 KRTAP3-2Q9BYR7 98 aa14.62□□□□□ -0.07
CASKP1-201ENST00000412870 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.62□□□□□ -0.07
CASKP1-201ENST00000412870 CHRM1P11229 460 aaPredicted RBP14.6□□□□□ -0.07
CASKP1-201ENST00000412870 PSEN1P49768 467 aa14.6□□□□□ -0.07
CASKP1-201ENST00000412870 DPY19L2Q6NUT2 758 aa14.6□□□□□ -0.07
CASKP1-201ENST00000412870 L3MBTL3Q96JM7 780 aaPredicted RBP14.6□□□□□ -0.07
CASKP1-201ENST00000412870 NKX1-1Q15270 411 aaPredicted RBP14.59□□□□□ -0.07
CASKP1-201ENST00000412870 HS3ST6Q96QI5 342 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms