RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 ASTLQ6HA08 431 aaPredicted RBP10□□□□□ -0.81
HMGB3P2-201ENST00000411913 METRNQ9UJH8 293 aa10□□□□□ -0.81
HMGB3P2-201ENST00000411913 ATMINO43313 823 aaPredicted RBP9.99□□□□□ -0.81
HMGB3P2-201ENST00000411913 SLC39A7Q92504 469 aa9.99□□□□□ -0.81
HMGB3P2-201ENST00000411913 C7P10643 843 aa9.98□□□□□ -0.81
HMGB3P2-201ENST00000411913 MIER1Q8N108 512 aa9.98□□□□□ -0.81
HMGB3P2-201ENST00000411913 CCDC61Q9Y6R9 512 aa9.96□□□□□ -0.82
HMGB3P2-201ENST00000411913 KIF12Q96FN5 646 aa9.93□□□□□ -0.82
HMGB3P2-201ENST00000411913 MAMSTRQ6ZN01 415 aa9.92□□□□□ -0.82
HMGB3P2-201ENST00000411913 ATN1P54259 1190 aaPredicted RBP9.91□□□□□ -0.82
HMGB3P2-201ENST00000411913 POTEMA6NI47 508 aa9.9□□□□□ -0.82
HMGB3P2-201ENST00000411913 PLCD3Q8N3E9 789 aa9.88□□□□□ -0.83
HMGB3P2-201ENST00000411913 MAP3K13O43283 966 aa9.87□□□□□ -0.83
HMGB3P2-201ENST00000411913 POTEGQ6S5H5 508 aa9.87□□□□□ -0.83
HMGB3P2-201ENST00000411913 RASEFQ8IZ41 740 aa9.87□□□□□ -0.83
HMGB3P2-201ENST00000411913 POTEJP0CG39 1038 aa9.86□□□□□ -0.83
HMGB3P2-201ENST00000411913 SCUBE2Q9NQ36 999 aa9.86□□□□□ -0.83
HMGB3P2-201ENST00000411913 BMP2KQ9NSY1 1161 aaPredicted RBP9.86□□□□□ -0.83
HMGB3P2-201ENST00000411913 TRPC6Q9Y210 931 aa9.84□□□□□ -0.83
HMGB3P2-201ENST00000411913 TIE1P35590 1138 aa9.83□□□□□ -0.84
HMGB3P2-201ENST00000411913 SEC24BO95487 1268 aa9.8□□□□□ -0.84
HMGB3P2-201ENST00000411913 FAM163AQ96GL9 167 aaPredicted RBP9.8□□□□□ -0.84
HMGB3P2-201ENST00000411913 ZBTB47Q9UFB7 747 aaPredicted RBP9.8□□□□□ -0.84
HMGB3P2-201ENST00000411913 TTLL13PA6NNM8 815 aa9.77□□□□□ -0.85
HMGB3P2-201ENST00000411913 PCDHB13Q9Y5F0 798 aa9.77□□□□□ -0.85
HMGB3P2-201ENST00000411913 POTEFA5A3E0 1075 aa9.76□□□□□ -0.85
HMGB3P2-201ENST00000411913 SGIP1Q9BQI5 828 aa9.75□□□□□ -0.85
HMGB3P2-201ENST00000411913 PCDH10Q9P2E7 1040 aa9.75□□□□□ -0.85
HMGB3P2-201ENST00000411913 TRIM35Q9UPQ4 493 aa9.73□□□□□ -0.85
HMGB3P2-201ENST00000411913 COLQQ9Y215 455 aaPredicted RBP9.73□□□□□ -0.85
HMGB3P2-201ENST00000411913 NUBP1P53384 320 aa9.72□□□□□ -0.85
HMGB3P2-201ENST00000411913 FAM212AQ96EL1 285 aa9.72□□□□□ -0.85
HMGB3P2-201ENST00000411913 FKBP8Q14318 412 aa9.7□□□□□ -0.86
HMGB3P2-201ENST00000411913 IER5LQ5T953 404 aa9.69□□□□□ -0.86
HMGB3P2-201ENST00000411913 IFNL1Q8IU54 200 aa9.69□□□□□ -0.86
HMGB3P2-201ENST00000411913 LCE2DQ5TA82 110 aaPredicted RBP9.67□□□□□ -0.86
HMGB3P2-201ENST00000411913 TMEM106CQ9BVX2 250 aa9.67□□□□□ -0.86
HMGB3P2-201ENST00000411913 PLCG2P16885 1265 aa9.63□□□□□ -0.87
HMGB3P2-201ENST00000411913 DCAF8Q5TAQ9 597 aa9.63□□□□□ -0.87
HMGB3P2-201ENST00000411913 SLAIN1Q8ND83 568 aa9.61□□□□□ -0.87
HMGB3P2-201ENST00000411913 PYGBP11216 843 aa9.57□□□□□ -0.88
HMGB3P2-201ENST00000411913 FBXO3Q9UK99 471 aa9.57□□□□□ -0.88
HMGB3P2-201ENST00000411913 IRX5P78411 483 aaPredicted RBP9.54□□□□□ -0.88
HMGB3P2-201ENST00000411913 CDAN1Q8IWY9 1227 aa9.54□□□□□ -0.88
HMGB3P2-201ENST00000411913 OCEL1Q9H607 264 aa9.53□□□□□ -0.88
HMGB3P2-201ENST00000411913 PCDHB8Q9UN66 801 aa9.53□□□□□ -0.88
HMGB3P2-201ENST00000411913 KLHL34Q8N239 644 aa9.52□□□□□ -0.89
HMGB3P2-201ENST00000411913 ST18O60284 1047 aa9.51□□□□□ -0.89
HMGB3P2-201ENST00000411913 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.48□□□□□ -0.89
HMGB3P2-201ENST00000411913 GOLGA2Q08379 1002 aa9.46□□□□□ -0.9
HMGB3P2-201ENST00000411913 GSE1Q14687 1217 aa9.46□□□□□ -0.9
HMGB3P2-201ENST00000411913 SNPHO15079 494 aa9.45□□□□□ -0.9
HMGB3P2-201ENST00000411913 ZNF467Q7Z7K2 595 aaPredicted RBP9.44□□□□□ -0.9
HMGB3P2-201ENST00000411913 VASPP50552 380 aaPredicted RBP9.43□□□□□ -0.9
HMGB3P2-201ENST00000411913 MKRN3Q13064 507 aaKnown RBP9.42□□□□□ -0.9
HMGB3P2-201ENST00000411913 TMEM121BQ9BXQ6 578 aaPredicted RBP9.4□□□□□ -0.9
HMGB3P2-201ENST00000411913 C3orf67Q6ZVT6 689 aa9.39□□□□□ -0.91
HMGB3P2-201ENST00000411913 L3MBTL3Q96JM7 780 aaPredicted RBP9.38□□□□□ -0.91
HMGB3P2-201ENST00000411913 CHRM1P11229 460 aaPredicted RBP9.36□□□□□ -0.91
HMGB3P2-201ENST00000411913 PSEN1P49768 467 aa9.36□□□□□ -0.91
HMGB3P2-201ENST00000411913 PDCD7Q8N8D1 485 aaKnown RBP9.36□□□□□ -0.91
HMGB3P2-201ENST00000411913 MARVELD3Q96A59 401 aa9.36□□□□□ -0.91
HMGB3P2-201ENST00000411913 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.36□□□□□ -0.91
HMGB3P2-201ENST00000411913 PDAP1Q13442 181 aaKnown RBP9.3□□□□□ -0.92
HMGB3P2-201ENST00000411913 CIZ1Q9ULV3 898 aaPredicted RBP9.3□□□□□ -0.92
HMGB3P2-201ENST00000411913 EMP3P54852 163 aa9.29□□□□□ -0.92
HMGB3P2-201ENST00000411913 SPNS2Q8IVW8 549 aa9.29□□□□□ -0.92
HMGB3P2-201ENST00000411913 G3V3G9 751 aa9.28□□□□□ -0.92
HMGB3P2-201ENST00000411913 MMRN1Q13201 1228 aa9.28□□□□□ -0.92
HMGB3P2-201ENST00000411913 SPOCK2Q92563 424 aa9.28□□□□□ -0.92
HMGB3P2-201ENST00000411913 CABP2Q9NPB3 220 aa9.26□□□□□ -0.93
HMGB3P2-201ENST00000411913 DPY19L2Q6NUT2 758 aa9.23□□□□□ -0.93
HMGB3P2-201ENST00000411913 IFNLR1Q8IU57 520 aaPredicted RBP9.23□□□□□ -0.93
HMGB3P2-201ENST00000411913 FAM205CA6NFA0 338 aa9.22□□□□□ -0.93
HMGB3P2-201ENST00000411913 BOLA1Q9Y3E2 137 aa9.21□□□□□ -0.94
HMGB3P2-201ENST00000411913 ILDR1Q86SU0 546 aaPredicted RBP9.2□□□□□ -0.94
HMGB3P2-201ENST00000411913 HS3ST6Q96QI5 342 aa9.2□□□□□ -0.94
HMGB3P2-201ENST00000411913 ZNF710Q8N1W2 664 aa9.16□□□□□ -0.94
HMGB3P2-201ENST00000411913 POTEB3A0JP26 581 aa9.15□□□□□ -0.94
HMGB3P2-201ENST00000411913 POTEBQ6S5H4 581 aa9.15□□□□□ -0.94
HMGB3P2-201ENST00000411913 TRIM41Q8WV44 630 aa9.12□□□□□ -0.95
HMGB3P2-201ENST00000411913 KRTAP3-3Q9BYR6 98 aa9.12□□□□□ -0.95
HMGB3P2-201ENST00000411913 KRTAP3-2Q9BYR7 98 aa9.12□□□□□ -0.95
HMGB3P2-201ENST00000411913 HOXB3P14651 431 aaPredicted RBP9.11□□□□□ -0.95
HMGB3P2-201ENST00000411913 DOK7Q18PE1 504 aa9.11□□□□□ -0.95
HMGB3P2-201ENST00000411913 EFCAB3Q8N7B9 438 aa9.11□□□□□ -0.95
HMGB3P2-201ENST00000411913 ERBB3P21860 1342 aa9.09□□□□□ -0.95
HMGB3P2-201ENST00000411913 HOXB1P14653 301 aaPredicted RBP9.09□□□□□ -0.95
HMGB3P2-201ENST00000411913 RIMBP2O15034 1052 aa9.08□□□□□ -0.96
HMGB3P2-201ENST00000411913 MICALL2Q8IY33 904 aa9.02□□□□□ -0.97
HMGB3P2-201ENST00000411913 RIOK3O14730 519 aaKnown RBP9.01□□□□□ -0.97
HMGB3P2-201ENST00000411913 SOX12O15370 315 aa9.01□□□□□ -0.97
HMGB3P2-201ENST00000411913 VARS2Q5ST30 1063 aaKnown RBP9□□□□□ -0.97
HMGB3P2-201ENST00000411913 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.98□□□□□ -0.97
HMGB3P2-201ENST00000411913 ZFP91Q96JP5 570 aaPredicted RBP8.98□□□□□ -0.97
HMGB3P2-201ENST00000411913 ZSWIM6Q9HCJ5 1215 aa8.98□□□□□ -0.97
HMGB3P2-201ENST00000411913 VGFO15240 615 aaPredicted RBP8.97□□□□□ -0.97
HMGB3P2-201ENST00000411913 TMEM92Q6UXU6 159 aa8.97□□□□□ -0.97
HMGB3P2-201ENST00000411913 PHF8Q9UPP1 1060 aa8.96□□□□□ -0.98
HMGB3P2-201ENST00000411913 RNF166Q96A37 237 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms