RNA–Protein interactions for RNA: ENST00000411010.1

RN7SKP58-201, Transcript of RNA, 7SK small nuclear pseudogene 58, humanhuman

BASIC

Gene RN7SKP58, Length 305 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP58-201ENST00000411010 SLC39A7Q92504 469 aa12□□□□□ -0.49
RN7SKP58-201ENST00000411010 ATMINO43313 823 aaPredicted RBP11.96□□□□□ -0.49
RN7SKP58-201ENST00000411010 STAG3Q9UJ98 1225 aa11.96□□□□□ -0.49
RN7SKP58-201ENST00000411010 MS4A3Q96HJ5 214 aa11.92□□□□□ -0.5
RN7SKP58-201ENST00000411010 SCUBE2Q9NQ36 999 aa11.92□□□□□ -0.5
RN7SKP58-201ENST00000411010 NPM1P06748 294 aaKnown RBP eCLIP11.88□□□□□ -0.51
RN7SKP58-201ENST00000411010 MNX1P50219 401 aaPredicted RBP11.83□□□□□ -0.52
RN7SKP58-201ENST00000411010 CDAN1Q8IWY9 1227 aa11.82□□□□□ -0.52
RN7SKP58-201ENST00000411010 ATN1P54259 1190 aaPredicted RBP11.79□□□□□ -0.52
RN7SKP58-201ENST00000411010 POTEFA5A3E0 1075 aa11.76□□□□□ -0.53
RN7SKP58-201ENST00000411010 BMP2KQ9NSY1 1161 aaPredicted RBP11.66□□□□□ -0.54
RN7SKP58-201ENST00000411010 TSPYL2Q9H2G4 693 aaPredicted RBP11.64□□□□□ -0.55
RN7SKP58-201ENST00000411010 CCDC61Q9Y6R9 512 aa11.63□□□□□ -0.55
RN7SKP58-201ENST00000411010 SPDYE4A6NLX3 237 aa11.61□□□□□ -0.55
RN7SKP58-201ENST00000411010 MMRN1Q13201 1228 aa11.61□□□□□ -0.55
RN7SKP58-201ENST00000411010 KIF12Q96FN5 646 aa11.61□□□□□ -0.55
RN7SKP58-201ENST00000411010 TRPC6Q9Y210 931 aa11.6□□□□□ -0.55
RN7SKP58-201ENST00000411010 COLQQ9Y215 455 aaPredicted RBP11.59□□□□□ -0.55
RN7SKP58-201ENST00000411010 ST18O60284 1047 aa11.58□□□□□ -0.56
RN7SKP58-201ENST00000411010 TIE1P35590 1138 aa11.58□□□□□ -0.56
RN7SKP58-201ENST00000411010 SEC24BO95487 1268 aa11.57□□□□□ -0.56
RN7SKP58-201ENST00000411010 SPNS2Q8IVW8 549 aa11.55□□□□□ -0.56
RN7SKP58-201ENST00000411010 SLAIN1Q8ND83 568 aa11.51□□□□□ -0.57
RN7SKP58-201ENST00000411010 TTLL13PA6NNM8 815 aa11.5□□□□□ -0.57
RN7SKP58-201ENST00000411010 MAP3K13O43283 966 aa11.49□□□□□ -0.57
RN7SKP58-201ENST00000411010 IER5LQ5T953 404 aa11.46□□□□□ -0.57
RN7SKP58-201ENST00000411010 TRIM35Q9UPQ4 493 aa11.42□□□□□ -0.58
RN7SKP58-201ENST00000411010 TMEM121BQ9BXQ6 578 aaPredicted RBP11.4□□□□□ -0.58
RN7SKP58-201ENST00000411010 RASEFQ8IZ41 740 aa11.32□□□□□ -0.6
RN7SKP58-201ENST00000411010 MARVELD3Q96A59 401 aa11.3□□□□□ -0.6
RN7SKP58-201ENST00000411010 SGIP1Q9BQI5 828 aa11.3□□□□□ -0.6
RN7SKP58-201ENST00000411010 PLCG2P16885 1265 aa11.29□□□□□ -0.6
RN7SKP58-201ENST00000411010 SNPHO15079 494 aa11.28□□□□□ -0.6
RN7SKP58-201ENST00000411010 PCDHB13Q9Y5F0 798 aa11.27□□□□□ -0.61
RN7SKP58-201ENST00000411010 IRX5P78411 483 aaPredicted RBP11.23□□□□□ -0.61
RN7SKP58-201ENST00000411010 PROM2Q8N271 834 aa11.22□□□□□ -0.61
RN7SKP58-201ENST00000411010 CSRNP3Q8WYN3 585 aa11.22□□□□□ -0.61
RN7SKP58-201ENST00000411010 PLEKHG5O94827 1062 aa11.21□□□□□ -0.61
RN7SKP58-201ENST00000411010 TMEM106CQ9BVX2 250 aa11.21□□□□□ -0.61
RN7SKP58-201ENST00000411010 IFNL1Q8IU54 200 aa11.19□□□□□ -0.62
RN7SKP58-201ENST00000411010 KRTAP3-3Q9BYR6 98 aa11.18□□□□□ -0.62
RN7SKP58-201ENST00000411010 KRTAP3-2Q9BYR7 98 aa11.18□□□□□ -0.62
RN7SKP58-201ENST00000411010 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.18□□□□□ -0.62
RN7SKP58-201ENST00000411010 MIER1Q8N108 512 aa11.16□□□□□ -0.62
RN7SKP58-201ENST00000411010 EMP3P54852 163 aa11.15□□□□□ -0.62
RN7SKP58-201ENST00000411010 OCEL1Q9H607 264 aa11.15□□□□□ -0.62
RN7SKP58-201ENST00000411010 POTEB3A0JP26 581 aa11.11□□□□□ -0.63
RN7SKP58-201ENST00000411010 POTEBQ6S5H4 581 aa11.11□□□□□ -0.63
RN7SKP58-201ENST00000411010 HS3ST6Q96QI5 342 aa11.11□□□□□ -0.63
RN7SKP58-201ENST00000411010 FAM205CA6NFA0 338 aa11.06□□□□□ -0.64
RN7SKP58-201ENST00000411010 NUBP1P53384 320 aa11.04□□□□□ -0.64
RN7SKP58-201ENST00000411010 C3orf67Q6ZVT6 689 aa10.99□□□□□ -0.65
RN7SKP58-201ENST00000411010 PLCD3Q8N3E9 789 aa10.97□□□□□ -0.65
RN7SKP58-201ENST00000411010 FAM212AQ96EL1 285 aa10.97□□□□□ -0.65
RN7SKP58-201ENST00000411010 ZBTB47Q9UFB7 747 aaPredicted RBP10.95□□□□□ -0.66
RN7SKP58-201ENST00000411010 PDCD7Q8N8D1 485 aaKnown RBP10.94□□□□□ -0.66
RN7SKP58-201ENST00000411010 RNF166Q96A37 237 aaPredicted RBP10.93□□□□□ -0.66
RN7SKP58-201ENST00000411010 L3MBTL3Q96JM7 780 aaPredicted RBP10.91□□□□□ -0.66
RN7SKP58-201ENST00000411010 PCDHB8Q9UN66 801 aa10.85□□□□□ -0.67
RN7SKP58-201ENST00000411010 PYGBP11216 843 aa10.84□□□□□ -0.67
RN7SKP58-201ENST00000411010 MYT1LQ9UL68 1186 aa10.82□□□□□ -0.68
RN7SKP58-201ENST00000411010 HOXB3P14651 431 aaPredicted RBP10.8□□□□□ -0.68
RN7SKP58-201ENST00000411010 MKRN3Q13064 507 aaKnown RBP10.8□□□□□ -0.68
RN7SKP58-201ENST00000411010 HOXB1P14653 301 aaPredicted RBP10.79□□□□□ -0.68
RN7SKP58-201ENST00000411010 ERBB3P21860 1342 aa10.78□□□□□ -0.68
RN7SKP58-201ENST00000411010 GOLGA2Q08379 1002 aa10.77□□□□□ -0.69
RN7SKP58-201ENST00000411010 DCAF8Q5TAQ9 597 aa10.77□□□□□ -0.69
RN7SKP58-201ENST00000411010 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.77□□□□□ -0.69
RN7SKP58-201ENST00000411010 ZNF710Q8N1W2 664 aa10.74□□□□□ -0.69
RN7SKP58-201ENST00000411010 VARS2Q5ST30 1063 aaKnown RBP10.69□□□□□ -0.7
RN7SKP58-201ENST00000411010 ILDR1Q86SU0 546 aaPredicted RBP10.69□□□□□ -0.7
RN7SKP58-201ENST00000411010 DOK7Q18PE1 504 aa10.68□□□□□ -0.7
RN7SKP58-201ENST00000411010 ZNF467Q7Z7K2 595 aaPredicted RBP10.67□□□□□ -0.7
RN7SKP58-201ENST00000411010 PTGER2P43116 358 aa10.66□□□□□ -0.7
RN7SKP58-201ENST00000411010 DPY19L2Q6NUT2 758 aa10.66□□□□□ -0.7
RN7SKP58-201ENST00000411010 EHMT2Q96KQ7 1210 aa10.64□□□□□ -0.71
RN7SKP58-201ENST00000411010 ZNF687Q8N1G0 1237 aa10.63□□□□□ -0.71
RN7SKP58-201ENST00000411010 BOLA1Q9Y3E2 137 aa10.63□□□□□ -0.71
RN7SKP58-201ENST00000411010 G3V3G9 751 aa10.62□□□□□ -0.71
RN7SKP58-201ENST00000411010 RIMBP2O15034 1052 aa10.61□□□□□ -0.71
RN7SKP58-201ENST00000411010 PSEN1P49768 467 aa10.6□□□□□ -0.71
RN7SKP58-201ENST00000411010 ZSWIM6Q9HCJ5 1215 aa10.53□□□□□ -0.72
RN7SKP58-201ENST00000411010 ANKRD13DQ6ZTN6 518 aa10.52□□□□□ -0.73
RN7SKP58-201ENST00000411010 CHRM1P11229 460 aaPredicted RBP10.51□□□□□ -0.73
RN7SKP58-201ENST00000411010 GSE1Q14687 1217 aa10.51□□□□□ -0.73
RN7SKP58-201ENST00000411010 PLA2G2EQ9NZK7 142 aa10.51□□□□□ -0.73
RN7SKP58-201ENST00000411010 PDAP1Q13442 181 aaKnown RBP10.48□□□□□ -0.73
RN7SKP58-201ENST00000411010 GPR153Q6NV75 609 aa10.48□□□□□ -0.73
RN7SKP58-201ENST00000411010 CABP2Q9NPB3 220 aa10.48□□□□□ -0.73
RN7SKP58-201ENST00000411010 LSM11P83369 360 aaKnown RBP eCLIP10.43□□□□□ -0.74
RN7SKP58-201ENST00000411010 TMEM92Q6UXU6 159 aa10.4□□□□□ -0.74
RN7SKP58-201ENST00000411010 HCSTQ9UBK5 93 aa10.38□□□□□ -0.75
RN7SKP58-201ENST00000411010 ARSIQ5FYB1 569 aa10.36□□□□□ -0.75
RN7SKP58-201ENST00000411010 ZNF316A6NFI3 1004 aaPredicted RBP10.35□□□□□ -0.75
RN7SKP58-201ENST00000411010 MICALL2Q8IY33 904 aa10.33□□□□□ -0.76
RN7SKP58-201ENST00000411010 KLHL34Q8N239 644 aa10.32□□□□□ -0.76
RN7SKP58-201ENST00000411010 KHSRPQ92945 711 aaKnown RBP eCLIP10.29□□□□□ -0.76
RN7SKP58-201ENST00000411010 PBX2P40425 430 aa10.28□□□□□ -0.76
RN7SKP58-201ENST00000411010 EFCAB3Q8N7B9 438 aa10.26□□□□□ -0.77
RN7SKP58-201ENST00000411010 FBXO3Q9UK99 471 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms