RNA–Protein interactions for RNA: ENST00000410889.1

RNU4-27P-201, Transcript of RNA, U4 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU4-27P, Length 139 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-27P-201ENST00000410889 PRKAR2AP13861 404 aaKnown RBP12.44□□□□□ -0.42
RNU4-27P-201ENST00000410889 FARP1Q9Y4F1 1045 aaPredicted RBP12.43□□□□□ -0.42
RNU4-27P-201ENST00000410889 CHGAP10645 457 aaKnown RBP12.42□□□□□ -0.42
RNU4-27P-201ENST00000410889 CHRDL2Q6WN34 429 aa12.41□□□□□ -0.42
RNU4-27P-201ENST00000410889 FXR2P51116 673 aaKnown RBP eCLIP12.4□□□□□ -0.42
RNU4-27P-201ENST00000410889 HAP1P54257 671 aaPredicted RBP12.39□□□□□ -0.43
RNU4-27P-201ENST00000410889 RIOK3O14730 519 aaKnown RBP12.38□□□□□ -0.43
RNU4-27P-201ENST00000410889 CHRM1P11229 460 aaPredicted RBP12.37□□□□□ -0.43
RNU4-27P-201ENST00000410889 RNF25Q96BH1 459 aaPredicted RBP12.36□□□□□ -0.43
RNU4-27P-201ENST00000410889 PYGBP11216 843 aa12.35□□□□□ -0.43
RNU4-27P-201ENST00000410889 TSPYL2Q9H2G4 693 aaPredicted RBP12.35□□□□□ -0.43
RNU4-27P-201ENST00000410889 PAXIP1Q6ZW49 1069 aaPredicted RBP12.33□□□□□ -0.44
RNU4-27P-201ENST00000410889 HS6ST3Q8IZP7 471 aa12.33□□□□□ -0.44
RNU4-27P-201ENST00000410889 CFAP44Q96MT7 982 aa12.33□□□□□ -0.44
RNU4-27P-201ENST00000410889 PIP4P2Q8N4L2 257 aa12.32□□□□□ -0.44
RNU4-27P-201ENST00000410889 VGFO15240 615 aaPredicted RBP12.31□□□□□ -0.44
RNU4-27P-201ENST00000410889 PAK3O75914 559 aaPredicted RBP12.31□□□□□ -0.44
RNU4-27P-201ENST00000410889 SPRYD3Q8NCJ5 442 aa12.29□□□□□ -0.44
RNU4-27P-201ENST00000410889 STK25O00506 426 aa12.26□□□□□ -0.45
RNU4-27P-201ENST00000410889 ZNF467Q7Z7K2 595 aaPredicted RBP12.23□□□□□ -0.45
RNU4-27P-201ENST00000410889 SGIP1Q9BQI5 828 aa12.21□□□□□ -0.45
RNU4-27P-201ENST00000410889 DNAJC5Q9H3Z4 198 aa12.2□□□□□ -0.46
RNU4-27P-201ENST00000410889 CCDC61Q9Y6R9 512 aa12.2□□□□□ -0.46
RNU4-27P-201ENST00000410889 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.19□□□□□ -0.46
RNU4-27P-201ENST00000410889 ZFP91Q96JP5 570 aaPredicted RBP12.19□□□□□ -0.46
RNU4-27P-201ENST00000410889 STK24Q9Y6E0 443 aa12.19□□□□□ -0.46
RNU4-27P-201ENST00000410889 VSIG10Q8N0Z9 540 aa12.17□□□□□ -0.46
RNU4-27P-201ENST00000410889 BCL11BQ9C0K0 894 aaPredicted RBP12.17□□□□□ -0.46
RNU4-27P-201ENST00000410889 CD44P16070 742 aaKnown RBP12.12□□□□□ -0.47
RNU4-27P-201ENST00000410889 PDAP1Q13442 181 aaKnown RBP12.12□□□□□ -0.47
RNU4-27P-201ENST00000410889 ZNF579Q8NAF0 562 aaKnown RBP12.12□□□□□ -0.47
RNU4-27P-201ENST00000410889 ZRANB1Q9UGI0 708 aa12.11□□□□□ -0.47
RNU4-27P-201ENST00000410889 PCDHB13Q9Y5F0 798 aa12.11□□□□□ -0.47
RNU4-27P-201ENST00000410889 RYDENQ9NUL5 291 aaKnown RBP12.1□□□□□ -0.47
RNU4-27P-201ENST00000410889 PCDHB8Q9UN66 801 aa12.1□□□□□ -0.47
RNU4-27P-201ENST00000410889 NKX1-1Q15270 411 aaPredicted RBP12.08□□□□□ -0.48
RNU4-27P-201ENST00000410889 KIF12Q96FN5 646 aa12.06□□□□□ -0.48
RNU4-27P-201ENST00000410889 TSHZ2Q9NRE2 1034 aa12.06□□□□□ -0.48
RNU4-27P-201ENST00000410889 MAP3K13O43283 966 aa12.05□□□□□ -0.48
RNU4-27P-201ENST00000410889 PSEN1P49768 467 aa12.05□□□□□ -0.48
RNU4-27P-201ENST00000410889 GTPBP6O43824 516 aaPredicted RBP12.03□□□□□ -0.48
RNU4-27P-201ENST00000410889 IFNL1Q8IU54 200 aa12.03□□□□□ -0.48
RNU4-27P-201ENST00000410889 PHF12Q96QT6 1004 aa11.99□□□□□ -0.49
RNU4-27P-201ENST00000410889 KDM2AQ9Y2K7 1162 aa11.98□□□□□ -0.49
RNU4-27P-201ENST00000410889 C19orf67A6NJJ6 358 aa11.96□□□□□ -0.49
RNU4-27P-201ENST00000410889 BCANQ96GW7 911 aa11.93□□□□□ -0.5
RNU4-27P-201ENST00000410889 CABP2Q9NPB3 220 aa11.91□□□□□ -0.5
RNU4-27P-201ENST00000410889 GOLGA2Q08379 1002 aa11.88□□□□□ -0.51
RNU4-27P-201ENST00000410889 MS4A3Q96HJ5 214 aa11.87□□□□□ -0.51
RNU4-27P-201ENST00000410889 HAX1O00165 279 aa11.86□□□□□ -0.51
RNU4-27P-201ENST00000410889 EFCAB3Q8N7B9 438 aa11.86□□□□□ -0.51
RNU4-27P-201ENST00000410889 SOX12O15370 315 aa11.85□□□□□ -0.51
RNU4-27P-201ENST00000410889 NLRP6P59044 892 aa11.85□□□□□ -0.51
RNU4-27P-201ENST00000410889 MFRPQ9BY79 579 aa11.85□□□□□ -0.51
RNU4-27P-201ENST00000410889 TMEM106CQ9BVX2 250 aa11.84□□□□□ -0.51
RNU4-27P-201ENST00000410889 CLCN6P51797 869 aa11.8□□□□□ -0.52
RNU4-27P-201ENST00000410889 PHF8Q9UPP1 1060 aa11.79□□□□□ -0.52
RNU4-27P-201ENST00000410889 TIE1P35590 1138 aa11.78□□□□□ -0.52
RNU4-27P-201ENST00000410889 MKRN3Q13064 507 aaKnown RBP11.78□□□□□ -0.52
RNU4-27P-201ENST00000410889 FBXO22Q8NEZ5 403 aa11.76□□□□□ -0.53
RNU4-27P-201ENST00000410889 TRPC6Q9Y210 931 aa11.76□□□□□ -0.53
RNU4-27P-201ENST00000410889 NBR1Q14596 966 aa11.73□□□□□ -0.53
RNU4-27P-201ENST00000410889 WDR70Q9NW82 654 aa11.73□□□□□ -0.53
RNU4-27P-201ENST00000410889 TTLL13PA6NNM8 815 aa11.72□□□□□ -0.53
RNU4-27P-201ENST00000410889 GALR2O43603 387 aaPredicted RBP11.72□□□□□ -0.53
RNU4-27P-201ENST00000410889 PPP1R37O75864 691 aa11.7□□□□□ -0.54
RNU4-27P-201ENST00000410889 BMP2KQ9NSY1 1161 aaPredicted RBP11.69□□□□□ -0.54
RNU4-27P-201ENST00000410889 EVX2Q03828 476 aa11.68□□□□□ -0.54
RNU4-27P-201ENST00000410889 CADPS2Q86UW7 1296 aa11.67□□□□□ -0.54
RNU4-27P-201ENST00000410889 P3H3Q8IVL6 736 aa11.67□□□□□ -0.54
RNU4-27P-201ENST00000410889 TRIM35Q9UPQ4 493 aa11.66□□□□□ -0.54
RNU4-27P-201ENST00000410889 MS4A4AQ96JQ5 239 aa11.65□□□□□ -0.54
RNU4-27P-201ENST00000410889 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.64□□□□□ -0.55
RNU4-27P-201ENST00000410889 POTEHQ6S545 545 aa11.58□□□□□ -0.56
RNU4-27P-201ENST00000410889 ATN1P54259 1190 aaPredicted RBP11.57□□□□□ -0.56
RNU4-27P-201ENST00000410889 PDE4AP27815 886 aa11.56□□□□□ -0.56
RNU4-27P-201ENST00000410889 ATMINO43313 823 aaPredicted RBP11.55□□□□□ -0.56
RNU4-27P-201ENST00000410889 ASTLQ6HA08 431 aaPredicted RBP11.55□□□□□ -0.56
RNU4-27P-201ENST00000410889 GABBR2O75899 941 aa11.54□□□□□ -0.56
RNU4-27P-201ENST00000410889 ILDR1Q86SU0 546 aaPredicted RBP11.54□□□□□ -0.56
RNU4-27P-201ENST00000410889 IER5LQ5T953 404 aa11.53□□□□□ -0.56
RNU4-27P-201ENST00000410889 KCNV2Q8TDN2 545 aa11.52□□□□□ -0.57
RNU4-27P-201ENST00000410889 DCBLD2Q96PD2 775 aa11.52□□□□□ -0.57
RNU4-27P-201ENST00000410889 LARP6Q9BRS8 491 aaKnown RBP11.52□□□□□ -0.57
RNU4-27P-201ENST00000410889 G3V3G9 751 aa11.5□□□□□ -0.57
RNU4-27P-201ENST00000410889 E2F4Q16254 413 aa11.5□□□□□ -0.57
RNU4-27P-201ENST00000410889 TPRNQ4KMQ1 711 aa11.49□□□□□ -0.57
RNU4-27P-201ENST00000410889 OCEL1Q9H607 264 aa11.49□□□□□ -0.57
RNU4-27P-201ENST00000410889 NCKAP5LQ9HCH0 1330 aa11.49□□□□□ -0.57
RNU4-27P-201ENST00000410889 PLCG2P16885 1265 aa11.48□□□□□ -0.57
RNU4-27P-201ENST00000410889 DDX27Q96GQ7 796 aaKnown RBP11.48□□□□□ -0.57
RNU4-27P-201ENST00000410889 CRISPLD2Q9H0B8 497 aa11.48□□□□□ -0.57
RNU4-27P-201ENST00000410889 IRX5P78411 483 aaPredicted RBP11.47□□□□□ -0.57
RNU4-27P-201ENST00000410889 DPY19L2Q6NUT2 758 aa11.47□□□□□ -0.57
RNU4-27P-201ENST00000410889 PDCD7Q8N8D1 485 aaKnown RBP11.46□□□□□ -0.57
RNU4-27P-201ENST00000410889 MFSD10Q14728 455 aa11.45□□□□□ -0.58
RNU4-27P-201ENST00000410889 ARHGEF1Q92888 912 aaKnown RBP11.45□□□□□ -0.58
RNU4-27P-201ENST00000410889 PRKCSHP14314 528 aaPredicted RBP11.44□□□□□ -0.58
RNU4-27P-201ENST00000410889 MICALL2Q8IY33 904 aa11.44□□□□□ -0.58
RNU4-27P-201ENST00000410889 SEC24BO95487 1268 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms