RNA–Protein interactions for RNA: ENST00000410660.1

RNU6-887P-201, Transcript of RNA, U6 small nuclear 887, pseudogene, humanhuman

BASIC

Gene RNU6-887P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-887P-201ENST00000410660 C7P10643 843 aa5.55□□□□□ -1.52
RNU6-887P-201ENST00000410660 ATMINO43313 823 aaPredicted RBP5.54□□□□□ -1.52
RNU6-887P-201ENST00000410660 SCUBE2Q9NQ36 999 aa5.54□□□□□ -1.52
RNU6-887P-201ENST00000410660 PAK3O75914 559 aaPredicted RBP5.52□□□□□ -1.53
RNU6-887P-201ENST00000410660 MS4A3Q96HJ5 214 aa5.51□□□□□ -1.53
RNU6-887P-201ENST00000410660 POTEFA5A3E0 1075 aa5.49□□□□□ -1.53
RNU6-887P-201ENST00000410660 MMRN1Q13201 1228 aa5.49□□□□□ -1.53
RNU6-887P-201ENST00000410660 ATN1P54259 1190 aaPredicted RBP5.47□□□□□ -1.53
RNU6-887P-201ENST00000410660 SPNS2Q8IVW8 549 aa5.45□□□□□ -1.54
RNU6-887P-201ENST00000410660 ST18O60284 1047 aa5.42□□□□□ -1.54
RNU6-887P-201ENST00000410660 MNX1P50219 401 aaPredicted RBP5.42□□□□□ -1.54
RNU6-887P-201ENST00000410660 STAG3Q9UJ98 1225 aa5.41□□□□□ -1.54
RNU6-887P-201ENST00000410660 NPM1P06748 294 aaKnown RBP eCLIP5.4□□□□□ -1.54
RNU6-887P-201ENST00000410660 BMP2KQ9NSY1 1161 aaPredicted RBP5.38□□□□□ -1.55
RNU6-887P-201ENST00000410660 COLQQ9Y215 455 aaPredicted RBP5.38□□□□□ -1.55
RNU6-887P-201ENST00000410660 TRPC6Q9Y210 931 aa5.36□□□□□ -1.55
RNU6-887P-201ENST00000410660 CCDC61Q9Y6R9 512 aa5.34□□□□□ -1.55
RNU6-887P-201ENST00000410660 SLAIN1Q8ND83 568 aa5.33□□□□□ -1.56
RNU6-887P-201ENST00000410660 KIF12Q96FN5 646 aa5.33□□□□□ -1.56
RNU6-887P-201ENST00000410660 SEC24BO95487 1268 aa5.32□□□□□ -1.56
RNU6-887P-201ENST00000410660 TIE1P35590 1138 aa5.32□□□□□ -1.56
RNU6-887P-201ENST00000410660 TSPYL2Q9H2G4 693 aaPredicted RBP5.31□□□□□ -1.56
RNU6-887P-201ENST00000410660 TMEM121BQ9BXQ6 578 aaPredicted RBP5.3□□□□□ -1.56
RNU6-887P-201ENST00000410660 TTLL13PA6NNM8 815 aa5.29□□□□□ -1.56
RNU6-887P-201ENST00000410660 MAP3K13O43283 966 aa5.27□□□□□ -1.57
RNU6-887P-201ENST00000410660 IER5LQ5T953 404 aa5.27□□□□□ -1.57
RNU6-887P-201ENST00000410660 MARVELD3Q96A59 401 aa5.27□□□□□ -1.57
RNU6-887P-201ENST00000410660 TRIM35Q9UPQ4 493 aa5.26□□□□□ -1.57
RNU6-887P-201ENST00000410660 KRTAP3-3Q9BYR6 98 aa5.25□□□□□ -1.57
RNU6-887P-201ENST00000410660 KRTAP3-2Q9BYR7 98 aa5.25□□□□□ -1.57
RNU6-887P-201ENST00000410660 POTEB3A0JP26 581 aa5.2□□□□□ -1.58
RNU6-887P-201ENST00000410660 SPDYE4A6NLX3 237 aa5.2□□□□□ -1.58
RNU6-887P-201ENST00000410660 SNPHO15079 494 aa5.2□□□□□ -1.58
RNU6-887P-201ENST00000410660 POTEBQ6S5H4 581 aa5.2□□□□□ -1.58
RNU6-887P-201ENST00000410660 PLCG2P16885 1265 aa5.18□□□□□ -1.58
RNU6-887P-201ENST00000410660 EMP3P54852 163 aa5.18□□□□□ -1.58
RNU6-887P-201ENST00000410660 HS3ST6Q96QI5 342 aa5.18□□□□□ -1.58
RNU6-887P-201ENST00000410660 IRX5P78411 483 aaPredicted RBP5.17□□□□□ -1.58
RNU6-887P-201ENST00000410660 RASEFQ8IZ41 740 aa5.16□□□□□ -1.58
RNU6-887P-201ENST00000410660 FAM205CA6NFA0 338 aa5.14□□□□□ -1.59
RNU6-887P-201ENST00000410660 SGIP1Q9BQI5 828 aa5.14□□□□□ -1.59
RNU6-887P-201ENST00000410660 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.14□□□□□ -1.59
RNU6-887P-201ENST00000410660 PCDHB13Q9Y5F0 798 aa5.13□□□□□ -1.59
RNU6-887P-201ENST00000410660 TMEM106CQ9BVX2 250 aa5.12□□□□□ -1.59
RNU6-887P-201ENST00000410660 IFNL1Q8IU54 200 aa5.11□□□□□ -1.59
RNU6-887P-201ENST00000410660 RNF166Q96A37 237 aaPredicted RBP5.11□□□□□ -1.59
RNU6-887P-201ENST00000410660 OCEL1Q9H607 264 aa5.1□□□□□ -1.59
RNU6-887P-201ENST00000410660 MYT1LQ9UL68 1186 aa5.04□□□□□ -1.6
RNU6-887P-201ENST00000410660 C3orf67Q6ZVT6 689 aa5.03□□□□□ -1.6
RNU6-887P-201ENST00000410660 PROM2Q8N271 834 aa5.03□□□□□ -1.6
RNU6-887P-201ENST00000410660 PDCD7Q8N8D1 485 aaKnown RBP5.02□□□□□ -1.61
RNU6-887P-201ENST00000410660 PLEKHG5O94827 1062 aa5□□□□□ -1.61
RNU6-887P-201ENST00000410660 MIER1Q8N108 512 aa5□□□□□ -1.61
RNU6-887P-201ENST00000410660 HOXB3P14651 431 aaPredicted RBP4.99□□□□□ -1.61
RNU6-887P-201ENST00000410660 NUBP1P53384 320 aa4.99□□□□□ -1.61
RNU6-887P-201ENST00000410660 HOXB1P14653 301 aaPredicted RBP4.98□□□□□ -1.61
RNU6-887P-201ENST00000410660 ERBB3P21860 1342 aa4.97□□□□□ -1.61
RNU6-887P-201ENST00000410660 L3MBTL3Q96JM7 780 aaPredicted RBP4.97□□□□□ -1.61
RNU6-887P-201ENST00000410660 PTGER2P43116 358 aa4.94□□□□□ -1.62
RNU6-887P-201ENST00000410660 VARS2Q5ST30 1063 aaKnown RBP4.94□□□□□ -1.62
RNU6-887P-201ENST00000410660 FAM212AQ96EL1 285 aa4.94□□□□□ -1.62
RNU6-887P-201ENST00000410660 PCDHB8Q9UN66 801 aa4.93□□□□□ -1.62
RNU6-887P-201ENST00000410660 ZNF710Q8N1W2 664 aa4.92□□□□□ -1.62
RNU6-887P-201ENST00000410660 ZNF687Q8N1G0 1237 aa4.91□□□□□ -1.62
RNU6-887P-201ENST00000410660 PLA2G2EQ9NZK7 142 aa4.91□□□□□ -1.62
RNU6-887P-201ENST00000410660 PYGBP11216 843 aa4.9□□□□□ -1.63
RNU6-887P-201ENST00000410660 MKRN3Q13064 507 aaKnown RBP4.9□□□□□ -1.63
RNU6-887P-201ENST00000410660 PLCD3Q8N3E9 789 aa4.9□□□□□ -1.63
RNU6-887P-201ENST00000410660 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.9□□□□□ -1.63
RNU6-887P-201ENST00000410660 DOK7Q18PE1 504 aa4.89□□□□□ -1.63
RNU6-887P-201ENST00000410660 CSRNP3Q8WYN3 585 aa4.89□□□□□ -1.63
RNU6-887P-201ENST00000410660 ZBTB47Q9UFB7 747 aaPredicted RBP4.89□□□□□ -1.63
RNU6-887P-201ENST00000410660 ILDR1Q86SU0 546 aaPredicted RBP4.88□□□□□ -1.63
RNU6-887P-201ENST00000410660 GOLGA2Q08379 1002 aa4.87□□□□□ -1.63
RNU6-887P-201ENST00000410660 DPY19L2Q6NUT2 758 aa4.87□□□□□ -1.63
RNU6-887P-201ENST00000410660 ANKRD13DQ6ZTN6 518 aa4.86□□□□□ -1.63
RNU6-887P-201ENST00000410660 RIMBP2O15034 1052 aa4.84□□□□□ -1.63
RNU6-887P-201ENST00000410660 BOLA1Q9Y3E2 137 aa4.84□□□□□ -1.63
RNU6-887P-201ENST00000410660 LSM11P83369 360 aaKnown RBP eCLIP4.82□□□□□ -1.64
RNU6-887P-201ENST00000410660 DCAF8Q5TAQ9 597 aa4.82□□□□□ -1.64
RNU6-887P-201ENST00000410660 GPR153Q6NV75 609 aa4.82□□□□□ -1.64
RNU6-887P-201ENST00000410660 ZSWIM6Q9HCJ5 1215 aa4.82□□□□□ -1.64
RNU6-887P-201ENST00000410660 G3V3G9 751 aa4.81□□□□□ -1.64
RNU6-887P-201ENST00000410660 ZNF467Q7Z7K2 595 aaPredicted RBP4.8□□□□□ -1.64
RNU6-887P-201ENST00000410660 HCSTQ9UBK5 93 aa4.8□□□□□ -1.64
RNU6-887P-201ENST00000410660 PSEN1P49768 467 aa4.78□□□□□ -1.64
RNU6-887P-201ENST00000410660 TMEM92Q6UXU6 159 aa4.76□□□□□ -1.65
RNU6-887P-201ENST00000410660 IRX2Q9BZI1 471 aaPredicted RBP4.76□□□□□ -1.65
RNU6-887P-201ENST00000410660 ZNF316A6NFI3 1004 aaPredicted RBP4.75□□□□□ -1.65
RNU6-887P-201ENST00000410660 ARSIQ5FYB1 569 aa4.75□□□□□ -1.65
RNU6-887P-201ENST00000410660 POTEEQ6S8J3 1075 aa4.74□□□□□ -1.65
RNU6-887P-201ENST00000410660 CABP2Q9NPB3 220 aa4.74□□□□□ -1.65
RNU6-887P-201ENST00000410660 KHSRPQ92945 711 aaKnown RBP eCLIP4.73□□□□□ -1.65
RNU6-887P-201ENST00000410660 RGS20O76081 388 aa4.72□□□□□ -1.65
RNU6-887P-201ENST00000410660 PBX2P40425 430 aa4.72□□□□□ -1.65
RNU6-887P-201ENST00000410660 CHRM1P11229 460 aaPredicted RBP4.71□□□□□ -1.66
RNU6-887P-201ENST00000410660 PDAP1Q13442 181 aaKnown RBP4.71□□□□□ -1.66
RNU6-887P-201ENST00000410660 AXIN2Q9Y2T1 843 aa4.71□□□□□ -1.66
RNU6-887P-201ENST00000410660 MICALL2Q8IY33 904 aa4.69□□□□□ -1.66
RNU6-887P-201ENST00000410660 GSE1Q14687 1217 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms