RNA–Protein interactions for RNA: ENST00000410466.1

RNU6-554P-201, Transcript of RNA, U6 small nuclear 554, pseudogene, humanhuman

BASIC

Gene RNU6-554P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-554P-201ENST00000410466 ASTLQ6HA08 431 aaPredicted RBP6.9□□□□□ -1.3
RNU6-554P-201ENST00000410466 ATMINO43313 823 aaPredicted RBP6.87□□□□□ -1.31
RNU6-554P-201ENST00000410466 CREBZFQ9NS37 354 aa6.87□□□□□ -1.31
RNU6-554P-201ENST00000410466 ZBTB22O15209 634 aa6.84□□□□□ -1.31
RNU6-554P-201ENST00000410466 MMRN1Q13201 1228 aa6.84□□□□□ -1.31
RNU6-554P-201ENST00000410466 MS4A3Q96HJ5 214 aa6.84□□□□□ -1.31
RNU6-554P-201ENST00000410466 NPM1P06748 294 aaKnown RBP eCLIP6.79□□□□□ -1.32
RNU6-554P-201ENST00000410466 STAG3Q9UJ98 1225 aa6.79□□□□□ -1.32
RNU6-554P-201ENST00000410466 SPNS2Q8IVW8 549 aa6.78□□□□□ -1.32
RNU6-554P-201ENST00000410466 ATN1P54259 1190 aaPredicted RBP6.76□□□□□ -1.33
RNU6-554P-201ENST00000410466 ST18O60284 1047 aa6.73□□□□□ -1.33
RNU6-554P-201ENST00000410466 POTEFA5A3E0 1075 aa6.72□□□□□ -1.33
RNU6-554P-201ENST00000410466 SEC24BO95487 1268 aa6.69□□□□□ -1.34
RNU6-554P-201ENST00000410466 SLAIN1Q8ND83 568 aa6.67□□□□□ -1.34
RNU6-554P-201ENST00000410466 BMP2KQ9NSY1 1161 aaPredicted RBP6.67□□□□□ -1.34
RNU6-554P-201ENST00000410466 MNX1P50219 401 aaPredicted RBP6.66□□□□□ -1.34
RNU6-554P-201ENST00000410466 TMEM121BQ9BXQ6 578 aaPredicted RBP6.65□□□□□ -1.34
RNU6-554P-201ENST00000410466 COLQQ9Y215 455 aaPredicted RBP6.64□□□□□ -1.35
RNU6-554P-201ENST00000410466 TIE1P35590 1138 aa6.63□□□□□ -1.35
RNU6-554P-201ENST00000410466 TSPYL2Q9H2G4 693 aaPredicted RBP6.62□□□□□ -1.35
RNU6-554P-201ENST00000410466 KIF12Q96FN5 646 aa6.6□□□□□ -1.35
RNU6-554P-201ENST00000410466 CCDC61Q9Y6R9 512 aa6.6□□□□□ -1.35
RNU6-554P-201ENST00000410466 TRPC6Q9Y210 931 aa6.59□□□□□ -1.35
RNU6-554P-201ENST00000410466 IER5LQ5T953 404 aa6.58□□□□□ -1.36
RNU6-554P-201ENST00000410466 MARVELD3Q96A59 401 aa6.57□□□□□ -1.36
RNU6-554P-201ENST00000410466 TTLL13PA6NNM8 815 aa6.56□□□□□ -1.36
RNU6-554P-201ENST00000410466 SNPHO15079 494 aa6.56□□□□□ -1.36
RNU6-554P-201ENST00000410466 TRIM35Q9UPQ4 493 aa6.54□□□□□ -1.36
RNU6-554P-201ENST00000410466 MAP3K13O43283 966 aa6.53□□□□□ -1.36
RNU6-554P-201ENST00000410466 PLCG2P16885 1265 aa6.51□□□□□ -1.37
RNU6-554P-201ENST00000410466 EMP3P54852 163 aa6.51□□□□□ -1.37
RNU6-554P-201ENST00000410466 KRTAP3-3Q9BYR6 98 aa6.49□□□□□ -1.37
RNU6-554P-201ENST00000410466 KRTAP3-2Q9BYR7 98 aa6.49□□□□□ -1.37
RNU6-554P-201ENST00000410466 SPDYE4A6NLX3 237 aa6.47□□□□□ -1.37
RNU6-554P-201ENST00000410466 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.46□□□□□ -1.38
RNU6-554P-201ENST00000410466 HS3ST6Q96QI5 342 aa6.44□□□□□ -1.38
RNU6-554P-201ENST00000410466 FAM205CA6NFA0 338 aa6.42□□□□□ -1.38
RNU6-554P-201ENST00000410466 RNF166Q96A37 237 aaPredicted RBP6.41□□□□□ -1.38
RNU6-554P-201ENST00000410466 SGIP1Q9BQI5 828 aa6.41□□□□□ -1.38
RNU6-554P-201ENST00000410466 PCDHB13Q9Y5F0 798 aa6.41□□□□□ -1.38
RNU6-554P-201ENST00000410466 POTEB3A0JP26 581 aa6.39□□□□□ -1.39
RNU6-554P-201ENST00000410466 IRX5P78411 483 aaPredicted RBP6.39□□□□□ -1.39
RNU6-554P-201ENST00000410466 POTEBQ6S5H4 581 aa6.39□□□□□ -1.39
RNU6-554P-201ENST00000410466 TMEM106CQ9BVX2 250 aa6.39□□□□□ -1.39
RNU6-554P-201ENST00000410466 RASEFQ8IZ41 740 aa6.37□□□□□ -1.39
RNU6-554P-201ENST00000410466 OCEL1Q9H607 264 aa6.37□□□□□ -1.39
RNU6-554P-201ENST00000410466 PLEKHG5O94827 1062 aa6.36□□□□□ -1.39
RNU6-554P-201ENST00000410466 C3orf67Q6ZVT6 689 aa6.34□□□□□ -1.39
RNU6-554P-201ENST00000410466 IFNL1Q8IU54 200 aa6.32□□□□□ -1.4
RNU6-554P-201ENST00000410466 MYT1LQ9UL68 1186 aa6.32□□□□□ -1.4
RNU6-554P-201ENST00000410466 MIER1Q8N108 512 aa6.25□□□□□ -1.41
RNU6-554P-201ENST00000410466 L3MBTL3Q96JM7 780 aaPredicted RBP6.25□□□□□ -1.41
RNU6-554P-201ENST00000410466 ERBB3P21860 1342 aa6.24□□□□□ -1.41
RNU6-554P-201ENST00000410466 PTGER2P43116 358 aa6.23□□□□□ -1.41
RNU6-554P-201ENST00000410466 ZNF710Q8N1W2 664 aa6.2□□□□□ -1.42
RNU6-554P-201ENST00000410466 PDCD7Q8N8D1 485 aaKnown RBP6.2□□□□□ -1.42
RNU6-554P-201ENST00000410466 FAM212AQ96EL1 285 aa6.2□□□□□ -1.42
RNU6-554P-201ENST00000410466 HOXB1P14653 301 aaPredicted RBP6.19□□□□□ -1.42
RNU6-554P-201ENST00000410466 VARS2Q5ST30 1063 aaKnown RBP6.17□□□□□ -1.42
RNU6-554P-201ENST00000410466 PROM2Q8N271 834 aa6.17□□□□□ -1.42
RNU6-554P-201ENST00000410466 ZBTB47Q9UFB7 747 aaPredicted RBP6.17□□□□□ -1.42
RNU6-554P-201ENST00000410466 HOXB3P14651 431 aaPredicted RBP6.16□□□□□ -1.42
RNU6-554P-201ENST00000410466 GOLGA2Q08379 1002 aa6.16□□□□□ -1.42
RNU6-554P-201ENST00000410466 PLA2G2EQ9NZK7 142 aa6.16□□□□□ -1.42
RNU6-554P-201ENST00000410466 NUBP1P53384 320 aa6.15□□□□□ -1.42
RNU6-554P-201ENST00000410466 MKRN3Q13064 507 aaKnown RBP6.15□□□□□ -1.42
RNU6-554P-201ENST00000410466 PLCD3Q8N3E9 789 aa6.15□□□□□ -1.42
RNU6-554P-201ENST00000410466 DOK7Q18PE1 504 aa6.14□□□□□ -1.43
RNU6-554P-201ENST00000410466 RIMBP2O15034 1052 aa6.13□□□□□ -1.43
RNU6-554P-201ENST00000410466 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.12□□□□□ -1.43
RNU6-554P-201ENST00000410466 G3V3G9 751 aa6.11□□□□□ -1.43
RNU6-554P-201ENST00000410466 DCAF8Q5TAQ9 597 aa6.11□□□□□ -1.43
RNU6-554P-201ENST00000410466 ZNF687Q8N1G0 1237 aa6.11□□□□□ -1.43
RNU6-554P-201ENST00000410466 PCDHB8Q9UN66 801 aa6.11□□□□□ -1.43
RNU6-554P-201ENST00000410466 ANKRD13DQ6ZTN6 518 aa6.09□□□□□ -1.43
RNU6-554P-201ENST00000410466 PYGBP11216 843 aa6.08□□□□□ -1.44
RNU6-554P-201ENST00000410466 HCSTQ9UBK5 93 aa6.04□□□□□ -1.44
RNU6-554P-201ENST00000410466 BOLA1Q9Y3E2 137 aa6.04□□□□□ -1.44
RNU6-554P-201ENST00000410466 LSM11P83369 360 aaKnown RBP eCLIP6.02□□□□□ -1.45
RNU6-554P-201ENST00000410466 ZNF467Q7Z7K2 595 aaPredicted RBP6.02□□□□□ -1.45
RNU6-554P-201ENST00000410466 ZSWIM6Q9HCJ5 1215 aa6.02□□□□□ -1.45
RNU6-554P-201ENST00000410466 DPY19L2Q6NUT2 758 aa6.01□□□□□ -1.45
RNU6-554P-201ENST00000410466 ILDR1Q86SU0 546 aaPredicted RBP6□□□□□ -1.45
RNU6-554P-201ENST00000410466 IRX2Q9BZI1 471 aaPredicted RBP6□□□□□ -1.45
RNU6-554P-201ENST00000410466 CSRNP3Q8WYN3 585 aa5.98□□□□□ -1.45
RNU6-554P-201ENST00000410466 PSEN1P49768 467 aa5.96□□□□□ -1.46
RNU6-554P-201ENST00000410466 GPR153Q6NV75 609 aa5.95□□□□□ -1.46
RNU6-554P-201ENST00000410466 RGS20O76081 388 aa5.94□□□□□ -1.46
RNU6-554P-201ENST00000410466 ZNF316A6NFI3 1004 aaPredicted RBP5.92□□□□□ -1.46
RNU6-554P-201ENST00000410466 PBX2P40425 430 aa5.92□□□□□ -1.46
RNU6-554P-201ENST00000410466 ARSIQ5FYB1 569 aa5.9□□□□□ -1.46
RNU6-554P-201ENST00000410466 CABP2Q9NPB3 220 aa5.9□□□□□ -1.46
RNU6-554P-201ENST00000410466 PDAP1Q13442 181 aaKnown RBP5.89□□□□□ -1.47
RNU6-554P-201ENST00000410466 GSE1Q14687 1217 aa5.86□□□□□ -1.47
RNU6-554P-201ENST00000410466 Q6ZNB5 142 aa5.85□□□□□ -1.47
RNU6-554P-201ENST00000410466 AXIN2Q9Y2T1 843 aa5.85□□□□□ -1.47
RNU6-554P-201ENST00000410466 CHRM1P11229 460 aaPredicted RBP5.84□□□□□ -1.47
RNU6-554P-201ENST00000410466 ADGRD1Q6QNK2 874 aa5.84□□□□□ -1.47
RNU6-554P-201ENST00000410466 TMEM92Q6UXU6 159 aa5.84□□□□□ -1.47
RNU6-554P-201ENST00000410466 MICALL2Q8IY33 904 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms