RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 ZRANB1Q9UGI0 708 aa12.06□□□□□ -0.48
PMS1-203ENST00000409593 GABBR2O75899 941 aa12.04□□□□□ -0.48
PMS1-203ENST00000409593 DCAF8Q5TAQ9 597 aa12.04□□□□□ -0.48
PMS1-203ENST00000409593 CIZ1Q9ULV3 898 aaPredicted RBP12.02□□□□□ -0.49
PMS1-203ENST00000409593 GSE1Q14687 1217 aa11.99□□□□□ -0.49
PMS1-203ENST00000409593 CCDC61Q9Y6R9 512 aa11.95□□□□□ -0.5
PMS1-203ENST00000409593 PHF12Q96QT6 1004 aa11.94□□□□□ -0.5
PMS1-203ENST00000409593 ZNF579Q8NAF0 562 aaKnown RBP11.94□□□□□ -0.5
PMS1-203ENST00000409593 PYGBP11216 843 aa11.91□□□□□ -0.5
PMS1-203ENST00000409593 TRIM41Q8WV44 630 aa11.83□□□□□ -0.52
PMS1-203ENST00000409593 KIF12Q96FN5 646 aa11.83□□□□□ -0.52
PMS1-203ENST00000409593 MAP3K13O43283 966 aa11.82□□□□□ -0.52
PMS1-203ENST00000409593 ECM2O94769 699 aaPredicted RBP11.82□□□□□ -0.52
PMS1-203ENST00000409593 PKD2Q13563 968 aa11.82□□□□□ -0.52
PMS1-203ENST00000409593 AMER1Q5JTC6 1135 aaPredicted RBP11.81□□□□□ -0.52
PMS1-203ENST00000409593 PCDHB13Q9Y5F0 798 aa11.81□□□□□ -0.52
PMS1-203ENST00000409593 MS4A3Q96HJ5 214 aa11.79□□□□□ -0.52
PMS1-203ENST00000409593 CLCN6P51797 869 aa11.78□□□□□ -0.52
PMS1-203ENST00000409593 GALR2O43603 387 aaPredicted RBP11.78□□□□□ -0.52
PMS1-203ENST00000409593 POTEIP0CG38 1075 aa11.78□□□□□ -0.52
PMS1-203ENST00000409593 RTN4Q9NQC3 1192 aaKnown RBP11.78□□□□□ -0.52
PMS1-203ENST00000409593 CHRM1P11229 460 aaPredicted RBP11.77□□□□□ -0.53
PMS1-203ENST00000409593 IFNL1Q8IU54 200 aa11.74□□□□□ -0.53
PMS1-203ENST00000409593 SGIP1Q9BQI5 828 aa11.74□□□□□ -0.53
PMS1-203ENST00000409593 PCDHB8Q9UN66 801 aa11.73□□□□□ -0.53
PMS1-203ENST00000409593 ZNF467Q7Z7K2 595 aaPredicted RBP11.71□□□□□ -0.53
PMS1-203ENST00000409593 RGL2O15211 777 aa11.68□□□□□ -0.54
PMS1-203ENST00000409593 RNF25Q96BH1 459 aaPredicted RBP11.68□□□□□ -0.54
PMS1-203ENST00000409593 TRPC6Q9Y210 931 aa11.68□□□□□ -0.54
PMS1-203ENST00000409593 RIOK3O14730 519 aaKnown RBP11.66□□□□□ -0.54
PMS1-203ENST00000409593 DCBLD2Q96PD2 775 aa11.66□□□□□ -0.54
PMS1-203ENST00000409593 DCAF8L2P0C7V8 631 aa11.62□□□□□ -0.55
PMS1-203ENST00000409593 POTEMA6NI47 508 aa11.6□□□□□ -0.55
PMS1-203ENST00000409593 TIE1P35590 1138 aa11.6□□□□□ -0.55
PMS1-203ENST00000409593 PSEN1P49768 467 aa11.6□□□□□ -0.55
PMS1-203ENST00000409593 PDAP1Q13442 181 aaKnown RBP11.6□□□□□ -0.55
PMS1-203ENST00000409593 VGFO15240 615 aaPredicted RBP11.59□□□□□ -0.55
PMS1-203ENST00000409593 TMEM106CQ9BVX2 250 aa11.59□□□□□ -0.55
PMS1-203ENST00000409593 BMP2KQ9NSY1 1161 aaPredicted RBP11.59□□□□□ -0.55
PMS1-203ENST00000409593 TAOK2Q9UL54 1235 aa11.59□□□□□ -0.55
PMS1-203ENST00000409593 TTLL13PA6NNM8 815 aa11.56□□□□□ -0.56
PMS1-203ENST00000409593 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.55□□□□□ -0.56
PMS1-203ENST00000409593 ZFP91Q96JP5 570 aaPredicted RBP11.55□□□□□ -0.56
PMS1-203ENST00000409593 ATMINO43313 823 aaPredicted RBP11.54□□□□□ -0.56
PMS1-203ENST00000409593 ASTLQ6HA08 431 aaPredicted RBP11.54□□□□□ -0.56
PMS1-203ENST00000409593 ATN1P54259 1190 aaPredicted RBP11.53□□□□□ -0.56
PMS1-203ENST00000409593 POTEGQ6S5H5 508 aa11.53□□□□□ -0.56
PMS1-203ENST00000409593 PCDH10Q9P2E7 1040 aa11.52□□□□□ -0.57
PMS1-203ENST00000409593 STK25O00506 426 aa11.51□□□□□ -0.57
PMS1-203ENST00000409593 OTUD5Q96G74 571 aa11.51□□□□□ -0.57
PMS1-203ENST00000409593 TRIM35Q9UPQ4 493 aa11.51□□□□□ -0.57
PMS1-203ENST00000409593 GOLGA2Q08379 1002 aa11.49□□□□□ -0.57
PMS1-203ENST00000409593 BCL11BQ9C0K0 894 aaPredicted RBP11.49□□□□□ -0.57
PMS1-203ENST00000409593 STK24Q9Y6E0 443 aa11.49□□□□□ -0.57
PMS1-203ENST00000409593 CABP2Q9NPB3 220 aa11.48□□□□□ -0.57
PMS1-203ENST00000409593 CHGAP10645 457 aaKnown RBP11.47□□□□□ -0.57
PMS1-203ENST00000409593 PELP1Q8IZL8 1130 aaKnown RBP11.47□□□□□ -0.57
PMS1-203ENST00000409593 MKRN3Q13064 507 aaKnown RBP11.43□□□□□ -0.58
PMS1-203ENST00000409593 HS6ST3Q8IZP7 471 aa11.42□□□□□ -0.58
PMS1-203ENST00000409593 SLC39A7Q92504 469 aa11.41□□□□□ -0.58
PMS1-203ENST00000409593 EFCAB3Q8N7B9 438 aa11.4□□□□□ -0.59
PMS1-203ENST00000409593 METRNQ9UJH8 293 aa11.4□□□□□ -0.59
PMS1-203ENST00000409593 C7P10643 843 aa11.36□□□□□ -0.59
PMS1-203ENST00000409593 IER5LQ5T953 404 aa11.36□□□□□ -0.59
PMS1-203ENST00000409593 SEC24BO95487 1268 aa11.36□□□□□ -0.59
PMS1-203ENST00000409593 POTEB2H3BUK9 544 aa11.35□□□□□ -0.59
PMS1-203ENST00000409593 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.33□□□□□ -0.67e-7■■■□□ 15.8
PMS1-203ENST00000409593 PLCG2P16885 1265 aa11.32□□□□□ -0.6
PMS1-203ENST00000409593 IRX5P78411 483 aaPredicted RBP11.3□□□□□ -0.6
PMS1-203ENST00000409593 COLQQ9Y215 455 aaPredicted RBP11.3□□□□□ -0.6
PMS1-203ENST00000409593 SOX12O15370 315 aa11.3□□□□□ -0.6
PMS1-203ENST00000409593 OCEL1Q9H607 264 aa11.29□□□□□ -0.6
PMS1-203ENST00000409593 PHF8Q9UPP1 1060 aa11.29□□□□□ -0.6
PMS1-203ENST00000409593 POTEFA5A3E0 1075 aa11.27□□□□□ -0.6
PMS1-203ENST00000409593 MFRPQ9BY79 579 aa11.26□□□□□ -0.61
PMS1-203ENST00000409593 NLRP6P59044 892 aa11.25□□□□□ -0.61
PMS1-203ENST00000409593 NKX1-1Q15270 411 aaPredicted RBP11.25□□□□□ -0.61
PMS1-203ENST00000409593 PDCD7Q8N8D1 485 aaKnown RBP11.25□□□□□ -0.61
PMS1-203ENST00000409593 DNAJC5Q9H3Z4 198 aa11.24□□□□□ -0.61
PMS1-203ENST00000409593 BBXQ8WY36 941 aaPredicted RBP11.23□□□□□ -0.61
PMS1-203ENST00000409593 ILDR1Q86SU0 546 aaPredicted RBP11.21□□□□□ -0.61
PMS1-203ENST00000409593 FBXO22Q8NEZ5 403 aa11.21□□□□□ -0.61
PMS1-203ENST00000409593 DPY19L2Q6NUT2 758 aa11.2□□□□□ -0.62
PMS1-203ENST00000409593 MS4A4AQ96JQ5 239 aa11.2□□□□□ -0.62
PMS1-203ENST00000409593 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.2□□□□□ -0.62
PMS1-203ENST00000409593 G3V3G9 751 aa11.17□□□□□ -0.62
PMS1-203ENST00000409593 RYDENQ9NUL5 291 aaKnown RBP11.17□□□□□ -0.62
PMS1-203ENST00000409593 LCE2DQ5TA82 110 aaPredicted RBP11.16□□□□□ -0.62
PMS1-203ENST00000409593 L3MBTL3Q96JM7 780 aaPredicted RBP11.14□□□□□ -0.63
PMS1-203ENST00000409593 GTPBP6O43824 516 aaPredicted RBP11.13□□□□□ -0.63
PMS1-203ENST00000409593 BOLA1Q9Y3E2 137 aa11.13□□□□□ -0.63
PMS1-203ENST00000409593 CFAP44Q96MT7 982 aa11.12□□□□□ -0.63
PMS1-203ENST00000409593 POTEJP0CG39 1038 aa11.11□□□□□ -0.63
PMS1-203ENST00000409593 PAXIP1Q6ZW49 1069 aaPredicted RBP11.11□□□□□ -0.63
PMS1-203ENST00000409593 PPP1R37O75864 691 aa11.11□□□□□ -0.63
PMS1-203ENST00000409593 SPRYD3Q8NCJ5 442 aa11.1□□□□□ -0.63
PMS1-203ENST00000409593 SCUBE2Q9NQ36 999 aa11.09□□□□□ -0.63
PMS1-203ENST00000409593 MAMSTRQ6ZN01 415 aa11.08□□□□□ -0.64
PMS1-203ENST00000409593 C3orf67Q6ZVT6 689 aa11.08□□□□□ -0.64
PMS1-203ENST00000409593 MICALL2Q8IY33 904 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms