RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 ATMINO43313 823 aaPredicted RBP10.78□□□□□ -0.68
MIR548I3-201ENST00000408378 C7P10643 843 aa10.78□□□□□ -0.68
MIR548I3-201ENST00000408378 ASTLQ6HA08 431 aaPredicted RBP10.78□□□□□ -0.68
MIR548I3-201ENST00000408378 SCUBE2Q9NQ36 999 aa10.77□□□□□ -0.69
MIR548I3-201ENST00000408378 STAG3Q9UJ98 1225 aa10.76□□□□□ -0.69
MIR548I3-201ENST00000408378 NPM1P06748 294 aaKnown RBP eCLIP10.72□□□□□ -0.69
MIR548I3-201ENST00000408378 CDAN1Q8IWY9 1227 aa10.7□□□□□ -0.7
MIR548I3-201ENST00000408378 ATN1P54259 1190 aaPredicted RBP10.67□□□□□ -0.7
MIR548I3-201ENST00000408378 MNX1P50219 401 aaPredicted RBP10.62□□□□□ -0.71
MIR548I3-201ENST00000408378 TSPYL2Q9H2G4 693 aaPredicted RBP10.61□□□□□ -0.71
MIR548I3-201ENST00000408378 POTEFA5A3E0 1075 aa10.6□□□□□ -0.71
MIR548I3-201ENST00000408378 BMP2KQ9NSY1 1161 aaPredicted RBP10.54□□□□□ -0.72
MIR548I3-201ENST00000408378 TRPC6Q9Y210 931 aa10.54□□□□□ -0.72
MIR548I3-201ENST00000408378 SPDYE4A6NLX3 237 aa10.51□□□□□ -0.73
MIR548I3-201ENST00000408378 SEC24BO95487 1268 aa10.51□□□□□ -0.73
MIR548I3-201ENST00000408378 COLQQ9Y215 455 aaPredicted RBP10.49□□□□□ -0.73
MIR548I3-201ENST00000408378 MMRN1Q13201 1228 aa10.48□□□□□ -0.73
MIR548I3-201ENST00000408378 CCDC61Q9Y6R9 512 aa10.48□□□□□ -0.73
MIR548I3-201ENST00000408378 ST18O60284 1047 aa10.47□□□□□ -0.73
MIR548I3-201ENST00000408378 KIF12Q96FN5 646 aa10.47□□□□□ -0.73
MIR548I3-201ENST00000408378 SLAIN1Q8ND83 568 aa10.44□□□□□ -0.74
MIR548I3-201ENST00000408378 SPNS2Q8IVW8 549 aa10.43□□□□□ -0.74
MIR548I3-201ENST00000408378 MAP3K13O43283 966 aa10.41□□□□□ -0.74
MIR548I3-201ENST00000408378 TIE1P35590 1138 aa10.4□□□□□ -0.74
MIR548I3-201ENST00000408378 TTLL13PA6NNM8 815 aa10.38□□□□□ -0.75
MIR548I3-201ENST00000408378 TRIM35Q9UPQ4 493 aa10.35□□□□□ -0.75
MIR548I3-201ENST00000408378 MARVELD3Q96A59 401 aa10.3□□□□□ -0.76
MIR548I3-201ENST00000408378 IER5LQ5T953 404 aa10.27□□□□□ -0.77
MIR548I3-201ENST00000408378 RASEFQ8IZ41 740 aa10.26□□□□□ -0.77
MIR548I3-201ENST00000408378 PLCG2P16885 1265 aa10.24□□□□□ -0.77
MIR548I3-201ENST00000408378 PCDHB13Q9Y5F0 798 aa10.23□□□□□ -0.77
MIR548I3-201ENST00000408378 TMEM121BQ9BXQ6 578 aaPredicted RBP10.22□□□□□ -0.77
MIR548I3-201ENST00000408378 TMEM106CQ9BVX2 250 aa10.17□□□□□ -0.78
MIR548I3-201ENST00000408378 PLEKHG5O94827 1062 aa10.16□□□□□ -0.78
MIR548I3-201ENST00000408378 CSRNP3Q8WYN3 585 aa10.16□□□□□ -0.78
MIR548I3-201ENST00000408378 SNPHO15079 494 aa10.15□□□□□ -0.78
MIR548I3-201ENST00000408378 MIER1Q8N108 512 aa10.15□□□□□ -0.78
MIR548I3-201ENST00000408378 IFNL1Q8IU54 200 aa10.14□□□□□ -0.79
MIR548I3-201ENST00000408378 EMP3P54852 163 aa10.13□□□□□ -0.79
MIR548I3-201ENST00000408378 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.12□□□□□ -0.79
MIR548I3-201ENST00000408378 IRX5P78411 483 aaPredicted RBP10.11□□□□□ -0.79
MIR548I3-201ENST00000408378 SGIP1Q9BQI5 828 aa10.1□□□□□ -0.79
MIR548I3-201ENST00000408378 KRTAP3-3Q9BYR6 98 aa10.08□□□□□ -0.8
MIR548I3-201ENST00000408378 KRTAP3-2Q9BYR7 98 aa10.08□□□□□ -0.8
MIR548I3-201ENST00000408378 FAM205CA6NFA0 338 aa10.07□□□□□ -0.8
MIR548I3-201ENST00000408378 HS3ST6Q96QI5 342 aa10.06□□□□□ -0.8
MIR548I3-201ENST00000408378 POTEB3A0JP26 581 aa10.05□□□□□ -0.8
MIR548I3-201ENST00000408378 POTEBQ6S5H4 581 aa10.05□□□□□ -0.8
MIR548I3-201ENST00000408378 OCEL1Q9H607 264 aa10.05□□□□□ -0.8
MIR548I3-201ENST00000408378 PROM2Q8N271 834 aa10.01□□□□□ -0.81
MIR548I3-201ENST00000408378 PLCD3Q8N3E9 789 aa10□□□□□ -0.81
MIR548I3-201ENST00000408378 C3orf67Q6ZVT6 689 aa9.98□□□□□ -0.81
MIR548I3-201ENST00000408378 NUBP1P53384 320 aa9.95□□□□□ -0.82
MIR548I3-201ENST00000408378 FAM212AQ96EL1 285 aa9.93□□□□□ -0.82
MIR548I3-201ENST00000408378 RNF166Q96A37 237 aaPredicted RBP9.91□□□□□ -0.82
MIR548I3-201ENST00000408378 PYGBP11216 843 aa9.88□□□□□ -0.83
MIR548I3-201ENST00000408378 PCDHB8Q9UN66 801 aa9.88□□□□□ -0.83
MIR548I3-201ENST00000408378 PDCD7Q8N8D1 485 aaKnown RBP9.86□□□□□ -0.83
MIR548I3-201ENST00000408378 ZBTB47Q9UFB7 747 aaPredicted RBP9.86□□□□□ -0.83
MIR548I3-201ENST00000408378 L3MBTL3Q96JM7 780 aaPredicted RBP9.83□□□□□ -0.84
MIR548I3-201ENST00000408378 GOLGA2Q08379 1002 aa9.82□□□□□ -0.84
MIR548I3-201ENST00000408378 DCAF8Q5TAQ9 597 aa9.81□□□□□ -0.84
MIR548I3-201ENST00000408378 EHMT2Q96KQ7 1210 aa9.81□□□□□ -0.84
MIR548I3-201ENST00000408378 MKRN3Q13064 507 aaKnown RBP9.8□□□□□ -0.84
MIR548I3-201ENST00000408378 ERBB3P21860 1342 aa9.8□□□□□ -0.84
MIR548I3-201ENST00000408378 MYT1LQ9UL68 1186 aa9.79□□□□□ -0.84
MIR548I3-201ENST00000408378 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.77□□□□□ -0.85
MIR548I3-201ENST00000408378 ZNF710Q8N1W2 664 aa9.76□□□□□ -0.85
MIR548I3-201ENST00000408378 HOXB3P14651 431 aaPredicted RBP9.73□□□□□ -0.85
MIR548I3-201ENST00000408378 HOXB1P14653 301 aaPredicted RBP9.71□□□□□ -0.86
MIR548I3-201ENST00000408378 VARS2Q5ST30 1063 aaKnown RBP9.71□□□□□ -0.86
MIR548I3-201ENST00000408378 DPY19L2Q6NUT2 758 aa9.7□□□□□ -0.86
MIR548I3-201ENST00000408378 G3V3G9 751 aa9.68□□□□□ -0.86
MIR548I3-201ENST00000408378 DOK7Q18PE1 504 aa9.64□□□□□ -0.87
MIR548I3-201ENST00000408378 ZNF467Q7Z7K2 595 aaPredicted RBP9.62□□□□□ -0.87
MIR548I3-201ENST00000408378 BOLA1Q9Y3E2 137 aa9.62□□□□□ -0.87
MIR548I3-201ENST00000408378 PSEN1P49768 467 aa9.61□□□□□ -0.87
MIR548I3-201ENST00000408378 RIMBP2O15034 1052 aa9.59□□□□□ -0.87
MIR548I3-201ENST00000408378 ANKRD13DQ6ZTN6 518 aa9.59□□□□□ -0.87
MIR548I3-201ENST00000408378 ZNF687Q8N1G0 1237 aa9.57□□□□□ -0.88
MIR548I3-201ENST00000408378 PTGER2P43116 358 aa9.54□□□□□ -0.88
MIR548I3-201ENST00000408378 CABP2Q9NPB3 220 aa9.54□□□□□ -0.88
MIR548I3-201ENST00000408378 PLA2G2EQ9NZK7 142 aa9.53□□□□□ -0.88
MIR548I3-201ENST00000408378 ILDR1Q86SU0 546 aaPredicted RBP9.52□□□□□ -0.89
MIR548I3-201ENST00000408378 GSE1Q14687 1217 aa9.48□□□□□ -0.89
MIR548I3-201ENST00000408378 PDAP1Q13442 181 aaKnown RBP9.46□□□□□ -0.9
MIR548I3-201ENST00000408378 GPR153Q6NV75 609 aa9.44□□□□□ -0.9
MIR548I3-201ENST00000408378 KLHL34Q8N239 644 aa9.44□□□□□ -0.9
MIR548I3-201ENST00000408378 LSM11P83369 360 aaKnown RBP eCLIP9.43□□□□□ -0.9
MIR548I3-201ENST00000408378 ZSWIM6Q9HCJ5 1215 aa9.43□□□□□ -0.9
MIR548I3-201ENST00000408378 ARSIQ5FYB1 569 aa9.42□□□□□ -0.9
MIR548I3-201ENST00000408378 TMEM92Q6UXU6 159 aa9.41□□□□□ -0.9
MIR548I3-201ENST00000408378 CHRM1P11229 460 aaPredicted RBP9.4□□□□□ -0.9
MIR548I3-201ENST00000408378 KHSRPQ92945 711 aaKnown RBP eCLIP9.39□□□□□ -0.91
MIR548I3-201ENST00000408378 ZNF316A6NFI3 1004 aaPredicted RBP9.36□□□□□ -0.91
MIR548I3-201ENST00000408378 HCSTQ9UBK5 93 aa9.36□□□□□ -0.91
MIR548I3-201ENST00000408378 FKBP8Q14318 412 aa9.35□□□□□ -0.91
MIR548I3-201ENST00000408378 MICALL2Q8IY33 904 aa9.35□□□□□ -0.91
MIR548I3-201ENST00000408378 EFCAB3Q8N7B9 438 aa9.33□□□□□ -0.92
MIR548I3-201ENST00000408378 AXIN2Q9Y2T1 843 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms