RNA–Protein interactions for RNA: ENST00000406524.6

CCDC178-205, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC178, Length 3,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-205ENST00000406524 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.66□□□□□ -1.5
CCDC178-205ENST00000406524 SALL2Q9Y467 1007 aaPredicted RBP5.66□□□□□ -1.5
CCDC178-205ENST00000406524 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.63□□□□□ -1.51
CCDC178-205ENST00000406524 AAMPQ13685 434 aa5.61□□□□□ -1.51
CCDC178-205ENST00000406524 ZBTB22O15209 634 aa5.6□□□□□ -1.51
CCDC178-205ENST00000406524 ARID3AQ99856 593 aa5.6□□□□□ -1.51
CCDC178-205ENST00000406524 NAP1L5Q96NT1 182 aaPredicted RBP5.59□□□□□ -1.51
CCDC178-205ENST00000406524 HSP90B1P14625 803 aaKnown RBP5.58□□□□□ -1.52
CCDC178-205ENST00000406524 BRPF3Q9ULD4 1205 aa5.58□□□□□ -1.52
CCDC178-205ENST00000406524 SHROOM4Q9ULL8 1493 aa5.58□□□□□ -1.52
CCDC178-205ENST00000406524 RBM10P98175 930 aaKnown RBP5.57□□□□□ -1.52
CCDC178-205ENST00000406524 VSIG10Q8N0Z9 540 aa5.56□□□□□ -1.52
CCDC178-205ENST00000406524 RSPH4AQ5TD94 716 aa5.56□□□□□ -1.52
CCDC178-205ENST00000406524 DEKP35659 375 aaKnown RBP5.55□□□□□ -1.52
CCDC178-205ENST00000406524 TRHP20396 242 aaPredicted RBP5.55□□□□□ -1.52
CCDC178-205ENST00000406524 FKBP8Q14318 412 aa5.55□□□□□ -1.52
CCDC178-205ENST00000406524 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.54□□□□□ -1.52
CCDC178-205ENST00000406524 CCDC9Q9Y3X0 531 aaKnown RBP5.54□□□□□ -1.52
CCDC178-205ENST00000406524 AKT1S1Q96B36 256 aa5.54□□□□□ -1.52
CCDC178-205ENST00000406524 ZNF428Q96B54 188 aa5.54□□□□□ -1.52
CCDC178-205ENST00000406524 PRDM10Q9NQV6 1147 aa5.53□□□□□ -1.52
CCDC178-205ENST00000406524 HAX1O00165 279 aa5.53□□□□□ -1.52
CCDC178-205ENST00000406524 ZFP91Q96JP5 570 aaPredicted RBP5.53□□□□□ -1.52
CCDC178-205ENST00000406524 RSPH6AQ9H0K4 717 aa5.53□□□□□ -1.52
CCDC178-205ENST00000406524 ZNF219Q9P2Y4 722 aaPredicted RBP5.53□□□□□ -1.52
CCDC178-205ENST00000406524 CAPN15O75808 1086 aa5.52□□□□□ -1.53
CCDC178-205ENST00000406524 TMED8Q6PL24 325 aaPredicted RBP5.52□□□□□ -1.53
CCDC178-205ENST00000406524 CLSPNQ9HAW4 1339 aa5.51□□□□□ -1.53
CCDC178-205ENST00000406524 PPARGC1BQ86YN6 1023 aaKnown RBP5.5□□□□□ -1.53
CCDC178-205ENST00000406524 ZNF592Q92610 1267 aa5.5□□□□□ -1.53
CCDC178-205ENST00000406524 MYT1LQ9UL68 1186 aa5.5□□□□□ -1.53
CCDC178-205ENST00000406524 NECTIN2Q92692 538 aa5.49□□□□□ -1.53
CCDC178-205ENST00000406524 BCCIPQ9P287 314 aaKnown RBP eCLIP5.49□□□□□ -1.53
CCDC178-205ENST00000406524 ZNF326Q5BKZ1 582 aaKnown RBP5.48□□□□□ -1.53
CCDC178-205ENST00000406524 ZNF526Q8TF50 670 aaPredicted RBP5.48□□□□□ -1.53
CCDC178-205ENST00000406524 FXR2P51116 673 aaKnown RBP eCLIP5.47□□□□□ -1.53
CCDC178-205ENST00000406524 CNPY4Q8N129 248 aa5.47□□□□□ -1.53
CCDC178-205ENST00000406524 ZMYND15Q9H091 742 aa5.47□□□□□ -1.53
CCDC178-205ENST00000406524 PIP4P2Q8N4L2 257 aa5.46□□□□□ -1.53
CCDC178-205ENST00000406524 PPP4R3CPQ6ZMV5 832 aa5.46□□□□□ -1.54
CCDC178-205ENST00000406524 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.46□□□□□ -1.54
CCDC178-205ENST00000406524 PUS7Q96PZ0 661 aaKnown RBP5.44□□□□□ -1.54
CCDC178-205ENST00000406524 CWC22Q9HCG8 908 aaKnown RBP5.44□□□□□ -1.54
CCDC178-205ENST00000406524 HMGB1P09429 215 aaKnown RBP5.44□□□□□ -1.54
CCDC178-205ENST00000406524 NAP1L2Q9ULW6 460 aaPredicted RBP5.44□□□□□ -1.54
CCDC178-205ENST00000406524 ZNF692Q9BU19 519 aaPredicted RBP5.42□□□□□ -1.54
CCDC178-205ENST00000406524 CHMP4BQ9H444 224 aaKnown RBP5.42□□□□□ -1.54
CCDC178-205ENST00000406524 TICAM2Q86XR7 235 aa5.41□□□□□ -1.54
CCDC178-205ENST00000406524 CERS3Q8IU89 383 aa5.41□□□□□ -1.54
CCDC178-205ENST00000406524 NCLP19338 710 aaKnown RBP5.4□□□□□ -1.55
CCDC178-205ENST00000406524 ACIN1Q9UKV3 1341 aaKnown RBP5.4□□□□□ -1.55
CCDC178-205ENST00000406524 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.39□□□□□ -1.55
CCDC178-205ENST00000406524 HNRNPUL2Q1KMD3 747 aaKnown RBP5.39□□□□□ -1.55
CCDC178-205ENST00000406524 GLIPR1L2Q4G1C9 344 aa5.39□□□□□ -1.55
CCDC178-205ENST00000406524 WWC1Q8IX03 1113 aa5.39□□□□□ -1.55
CCDC178-205ENST00000406524 FOXD4L5Q5VV16 416 aaPredicted RBP5.39□□□□□ -1.55
CCDC178-205ENST00000406524 FOXD4L4Q8WXT5 416 aaPredicted RBP5.39□□□□□ -1.55
CCDC178-205ENST00000406524 SECISBP2LQ93073 1101 aaKnown RBP5.38□□□□□ -1.55
CCDC178-205ENST00000406524 C1orf115Q9H7X2 142 aa5.38□□□□□ -1.55
CCDC178-205ENST00000406524 POTEMA6NI47 508 aa5.38□□□□□ -1.55
CCDC178-205ENST00000406524 ERICH6BQ5W0A0 696 aa5.38□□□□□ -1.55
CCDC178-205ENST00000406524 TSHZ2Q9NRE2 1034 aa5.38□□□□□ -1.55
CCDC178-205ENST00000406524 ARID3CA6NKF2 412 aa5.37□□□□□ -1.55
CCDC178-205ENST00000406524 PRDM16Q9HAZ2 1276 aa5.37□□□□□ -1.55
CCDC178-205ENST00000406524 RBM25P49756 843 aaKnown RBP5.37□□□□□ -1.55
CCDC178-205ENST00000406524 NBR1Q14596 966 aa5.37□□□□□ -1.55
CCDC178-205ENST00000406524 PSMD1Q99460 953 aa5.37□□□□□ -1.55
CCDC178-205ENST00000406524 ZBTB7CA1YPR0 619 aa5.36□□□□□ -1.55
CCDC178-205ENST00000406524 USP35Q9P2H5 1018 aa5.36□□□□□ -1.55
CCDC178-205ENST00000406524 ARID4BQ4LE39 1312 aaPredicted RBP5.36□□□□□ -1.55
CCDC178-205ENST00000406524 KCNG1Q9UIX4 513 aa5.36□□□□□ -1.55
CCDC178-205ENST00000406524 NEUROD1Q13562 356 aa5.35□□□□□ -1.55
CCDC178-205ENST00000406524 RAD21O60216 631 aa5.35□□□□□ -1.55
CCDC178-205ENST00000406524 FAM43BQ6ZT52 329 aaPredicted RBP5.35□□□□□ -1.55
CCDC178-205ENST00000406524 C19orf67A6NJJ6 358 aa5.34□□□□□ -1.55
CCDC178-205ENST00000406524 PPM1GO15355 546 aaPredicted RBP5.34□□□□□ -1.55
CCDC178-205ENST00000406524 CLSTN1O94985 981 aa5.34□□□□□ -1.55
CCDC178-205ENST00000406524 MTMR7Q9Y216 660 aa5.34□□□□□ -1.55
CCDC178-205ENST00000406524 NPM3O75607 178 aaKnown RBP5.34□□□□□ -1.56
CCDC178-205ENST00000406524 POTEGQ6S5H5 508 aa5.33□□□□□ -1.56
CCDC178-205ENST00000406524 U3KPZ7 1027 aaPredicted RBP5.33□□□□□ -1.56
CCDC178-205ENST00000406524 FAM177A1Q8N128 213 aaPredicted RBP5.32□□□□□ -1.56
CCDC178-205ENST00000406524 KCTD17Q8N5Z5 321 aa5.32□□□□□ -1.56
CCDC178-205ENST00000406524 KDM4AO75164 1064 aa5.31□□□□□ -1.56
CCDC178-205ENST00000406524 BBXQ8WY36 941 aaPredicted RBP5.31□□□□□ -1.56
CCDC178-205ENST00000406524 PLCD4Q9BRC7 762 aa5.31□□□□□ -1.56
CCDC178-205ENST00000406524 GABBR2O75899 941 aa5.31□□□□□ -1.56
CCDC178-205ENST00000406524 TEX2Q8IWB9 1127 aa5.31□□□□□ -1.56
CCDC178-205ENST00000406524 SPINK5Q9NQ38 1064 aaPredicted RBP5.3□□□□□ -1.56
CCDC178-205ENST00000406524 IPO4Q8TEX9 1081 aaKnown RBP5.29□□□□□ -1.56
CCDC178-205ENST00000406524 ZBTB12Q9Y330 459 aaPredicted RBP5.28□□□□□ -1.56
CCDC178-205ENST00000406524 OS9Q13438 667 aaPredicted RBP5.28□□□□□ -1.56
CCDC178-205ENST00000406524 PATL2C9JE40 543 aaKnown RBP5.27□□□□□ -1.57
CCDC178-205ENST00000406524 FAM9BQ8IZU0 186 aa5.26□□□□□ -1.57
CCDC178-205ENST00000406524 CCDC27Q2M243 656 aa5.26□□□□□ -1.57
CCDC178-205ENST00000406524 NPM1P06748 294 aaKnown RBP eCLIP5.26□□□□□ -1.57
CCDC178-205ENST00000406524 BRPF1P55201 1214 aaPredicted RBP5.26□□□□□ -1.57
CCDC178-205ENST00000406524 FAM50AQ14320 339 aaKnown RBP5.26□□□□□ -1.57
CCDC178-205ENST00000406524 FTSJ3Q8IY81 847 aaKnown RBP5.25□□□□□ -1.57
CCDC178-205ENST00000406524 CHRM1P11229 460 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms