RNA–Protein interactions for RNA: ENST00000405581.3

NRXN1-209, Transcript of neurexin 1, humanhuman

TSL 1 (best) BASIC

Gene NRXN1, Length 5,078 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-209ENST00000405581 SCAF1Q9H7N4 1312 aaKnown RBP22.97■■□□□ 1.27
NRXN1-209ENST00000405581 BAZ1BQ9UIG0 1483 aaKnown RBP22.94■■□□□ 1.26
NRXN1-209ENST00000405581 CDCA8Q53HL2 280 aa22.93■■□□□ 1.26
NRXN1-209ENST00000405581 CFAP53Q96M91 514 aa22.88■■□□□ 1.25
NRXN1-209ENST00000405581 WRNQ14191 1432 aaPredicted RBP eCLIP22.87■■□□□ 1.25
NRXN1-209ENST00000405581 KCNH8Q96L42 1107 aa22.85■■□□□ 1.25
NRXN1-209ENST00000405581 RRP7BPQ9NSQ0 103 aa22.85■■□□□ 1.25
NRXN1-209ENST00000405581 GOLGA3Q08378 1498 aa22.85■■□□□ 1.25
NRXN1-209ENST00000405581 A0A0G2JS52 829 aa22.84■■□□□ 1.25
NRXN1-209ENST00000405581 CDK11BP21127 795 aaKnown RBP22.84■■□□□ 1.25
NRXN1-209ENST00000405581 C14orf37Q86TY3 774 aa22.84■■□□□ 1.25
NRXN1-209ENST00000405581 EIF5BO60841 1220 aaKnown RBP22.83■■□□□ 1.25
NRXN1-209ENST00000405581 BAZ1AQ9NRL2 1556 aaPredicted RBP22.79■■□□□ 1.24
NRXN1-209ENST00000405581 BECN1Q14457 450 aa22.78■■□□□ 1.24
NRXN1-209ENST00000405581 ZBTB7CA1YPR0 619 aa22.77■■□□□ 1.24
NRXN1-209ENST00000405581 GLIPR1L2Q4G1C9 344 aa22.77■■□□□ 1.24
NRXN1-209ENST00000405581 ANP32EQ9BTT0 268 aa22.77■■□□□ 1.24
NRXN1-209ENST00000405581 CFDP1Q9UEE9 299 aaPredicted RBP22.77■■□□□ 1.24
NRXN1-209ENST00000405581 NCLP19338 710 aaKnown RBP22.75■■□□□ 1.23
NRXN1-209ENST00000405581 KIF27Q86VH2 1401 aa22.75■■□□□ 1.23
NRXN1-209ENST00000405581 DDRGK1Q96HY6 314 aa22.75■■□□□ 1.23
NRXN1-209ENST00000405581 KNSTRNQ9Y448 316 aa22.74■■□□□ 1.23
NRXN1-209ENST00000405581 HAP1P54257 671 aaPredicted RBP22.73■■□□□ 1.23
NRXN1-209ENST00000405581 CEP162Q5TB80 1403 aa22.73■■□□□ 1.23
NRXN1-209ENST00000405581 RGL3Q3MIN7 710 aa22.71■■□□□ 1.23
NRXN1-209ENST00000405581 GOLGA6L22H0YM25 854 aa22.7■■□□□ 1.23
NRXN1-209ENST00000405581 ARID4BQ4LE39 1312 aaPredicted RBP22.7■■□□□ 1.22
NRXN1-209ENST00000405581 NUDCQ9Y266 331 aa22.66■■□□□ 1.22
NRXN1-209ENST00000405581 CEP164Q9UPV0 1460 aa22.66■■□□□ 1.22
NRXN1-209ENST00000405581 MIER1Q8N108 512 aa22.64■■□□□ 1.22
NRXN1-209ENST00000405581 HIRIP3Q9BW71 556 aaPredicted RBP22.64■■□□□ 1.21
NRXN1-209ENST00000405581 TNIKQ9UKE5 1360 aa22.63■■□□□ 1.21
NRXN1-209ENST00000405581 NBR1Q14596 966 aa22.63■■□□□ 1.21
NRXN1-209ENST00000405581 CASC1Q6TDU7 716 aa22.63■■□□□ 1.21
NRXN1-209ENST00000405581 CARD11Q9BXL7 1154 aa22.63■■□□□ 1.21
NRXN1-209ENST00000405581 CHMP4BQ9H444 224 aaKnown RBP22.62■■□□□ 1.21
NRXN1-209ENST00000405581 MAPK8IP3Q9UPT6 1336 aa22.62■■□□□ 1.21
NRXN1-209ENST00000405581 PLEKHG5O94827 1062 aa22.6■■□□□ 1.21
NRXN1-209ENST00000405581 MYO15BQ96JP2 1530 aa22.59■■□□□ 1.21
NRXN1-209ENST00000405581 CECR2Q9BXF3 1484 aa22.59■■□□□ 1.21
NRXN1-209ENST00000405581 ARXQ96QS3 562 aa22.58■■□□□ 1.21
NRXN1-209ENST00000405581 FTSJ3Q8IY81 847 aaKnown RBP22.58■■□□□ 1.2
NRXN1-209ENST00000405581 IRX6P78412 446 aaPredicted RBP22.57■■□□□ 1.2
NRXN1-209ENST00000405581 POGKQ9P215 609 aa22.57■■□□□ 1.2
NRXN1-209ENST00000405581 ZRSR1Q15695 479 aaKnown RBP22.57■■□□□ 1.2
NRXN1-209ENST00000405581 PPM1GO15355 546 aaPredicted RBP22.55■■□□□ 1.2
NRXN1-209ENST00000405581 MS4A1P11836 297 aa22.54■■□□□ 1.2
NRXN1-209ENST00000405581 TRIM44Q96DX7 344 aaPredicted RBP22.53■■□□□ 1.2
NRXN1-209ENST00000405581 SENP3Q9H4L4 574 aaPredicted RBP22.53■■□□□ 1.2
NRXN1-209ENST00000405581 PNNQ9H307 717 aaKnown RBP22.52■■□□□ 1.2
NRXN1-209ENST00000405581 HDGFP51858 240 aaKnown RBP22.49■■□□□ 1.19
NRXN1-209ENST00000405581 ERCC6Q03468 1493 aa22.49■■□□□ 1.19
NRXN1-209ENST00000405581 CCNB3Q8WWL7 1395 aa22.44■■□□□ 1.18
NRXN1-209ENST00000405581 FHAD1B1AJZ9 1412 aa22.44■■□□□ 1.18
NRXN1-209ENST00000405581 KANK1Q14678 1352 aa22.44■■□□□ 1.18
NRXN1-209ENST00000405581 LMOD2Q6P5Q4 547 aa22.42■■□□□ 1.18
NRXN1-209ENST00000405581 NEUROD2Q15784 382 aa22.4■■□□□ 1.18
NRXN1-209ENST00000405581 LAS1LQ9Y4W2 734 aaKnown RBP22.4■■□□□ 1.18
NRXN1-209ENST00000405581 TMF1P82094 1093 aa22.39■■□□□ 1.17
NRXN1-209ENST00000405581 TIMELESSQ9UNS1 1208 aa22.38■■□□□ 1.17
NRXN1-209ENST00000405581 PTMAP06454 111 aaKnown RBP22.37■■□□□ 1.17
NRXN1-209ENST00000405581 NPHP1O15259 732 aa22.35■■□□□ 1.17
NRXN1-209ENST00000405581 CARMIL1Q5VZK9 1371 aa22.35■■□□□ 1.17
NRXN1-209ENST00000405581 CUX2O14529 1486 aa22.34■■□□□ 1.17
NRXN1-209ENST00000405581 OS9Q13438 667 aaPredicted RBP22.33■■□□□ 1.16
NRXN1-209ENST00000405581 PPP4R2Q9NY27 417 aa22.33■■□□□ 1.16
NRXN1-209ENST00000405581 U2SURPO15042 1029 aaKnown RBP22.32■■□□□ 1.16
NRXN1-209ENST00000405581 SUPT16HQ9Y5B9 1047 aaKnown RBP22.32■■□□□ 1.16
NRXN1-209ENST00000405581 MROH2BQ7Z745 1585 aa22.32■■□□□ 1.16
NRXN1-209ENST00000405581 SMARCA2P51531 1590 aa22.32■■□□□ 1.16
NRXN1-209ENST00000405581 FRAT1Q92837 279 aaPredicted RBP22.3■■□□□ 1.16
NRXN1-209ENST00000405581 FGD1P98174 961 aa22.29■■□□□ 1.16
NRXN1-209ENST00000405581 CCDC88BA6NC98 1476 aa22.27■■□□□ 1.16
NRXN1-209ENST00000405581 CFAP44Q96MT7 982 aa22.27■■□□□ 1.16
NRXN1-209ENST00000405581 SOGA1O94964 1423 aa22.26■■□□□ 1.15
NRXN1-209ENST00000405581 KCNJ4P48050 445 aa22.25■■□□□ 1.15
NRXN1-209ENST00000405581 DCAF11Q8TEB1 546 aa22.25■■□□□ 1.15
NRXN1-209ENST00000405581 TNNT2P45379 298 aaPredicted RBP22.25■■□□□ 1.15
NRXN1-209ENST00000405581 GOLGA2Q08379 1002 aa22.25■■□□□ 1.15
NRXN1-209ENST00000405581 SIN3AQ96ST3 1273 aa22.24■■□□□ 1.15
NRXN1-209ENST00000405581 CC2D1BQ5T0F9 858 aaKnown RBP22.24■■□□□ 1.15
NRXN1-209ENST00000405581 GOLGA6L6A8MZA4 724 aa22.24■■□□□ 1.15
NRXN1-209ENST00000405581 NRDCO43847 1150 aa22.24■■□□□ 1.15
NRXN1-209ENST00000405581 RGS3P49796 1198 aa22.23■■□□□ 1.15
NRXN1-209ENST00000405581 ERICH6BQ5W0A0 696 aa22.22■■□□□ 1.15
NRXN1-209ENST00000405581 SRPK2P78362 688 aaKnown RBP22.22■■□□□ 1.15
NRXN1-209ENST00000405581 DNTTIP2Q5QJE6 756 aaKnown RBP22.21■■□□□ 1.15
NRXN1-209ENST00000405581 HSP90AB1P08238 724 aaKnown RBP22.19■■□□□ 1.14
NRXN1-209ENST00000405581 MORC1Q86VD1 984 aa22.19■■□□□ 1.14
NRXN1-209ENST00000405581 PDS5BQ9NTI5 1447 aa22.19■■□□□ 1.14
NRXN1-209ENST00000405581 EIF4G1Q04637 1599 aaKnown RBP22.19■■□□□ 1.14
NRXN1-209ENST00000405581 MCCP23508 829 aa22.16■■□□□ 1.14
NRXN1-209ENST00000405581 SENP3-EIF4A1A0A087X0R7 540 aa22.15■■□□□ 1.14
NRXN1-209ENST00000405581 CHMP4AQ9BY43 222 aa22.15■■□□□ 1.14
NRXN1-209ENST00000405581 CARMIL2Q6F5E8 1435 aa22.15■■□□□ 1.14
NRXN1-209ENST00000405581 HDGFL2Q7Z4V5 671 aaPredicted RBP22.15■■□□□ 1.14
NRXN1-209ENST00000405581 RTF1Q92541 710 aaKnown RBP22.15■■□□□ 1.14
NRXN1-209ENST00000405581 TRHP20396 242 aaPredicted RBP22.14■■□□□ 1.13
NRXN1-209ENST00000405581 GOLGA6L4A6NEF3 574 aa22.13■■□□□ 1.13
NRXN1-209ENST00000405581 CALD1Q05682 793 aaKnown RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms