RNA–Protein interactions for RNA: ENST00000404462.1

AL035555.1-201, humanhuman

BASIC

Gene AL035555.1, Length 1,790 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL035555.1-201ENST00000404462 CACNB1Q02641 598 aaPredicted RBP11.67□□□□□ -0.54
AL035555.1-201ENST00000404462 CCER1Q8TC90 406 aaPredicted RBP11.67□□□□□ -0.54
AL035555.1-201ENST00000404462 DCAF8L1A6NGE4 600 aa11.66□□□□□ -0.54
AL035555.1-201ENST00000404462 BCCIPQ9P287 314 aaKnown RBP eCLIP11.66□□□□□ -0.54
AL035555.1-201ENST00000404462 MROH2BQ7Z745 1585 aa11.65□□□□□ -0.54
AL035555.1-201ENST00000404462 NACADO15069 1562 aa11.65□□□□□ -0.54
AL035555.1-201ENST00000404462 CECR2Q9BXF3 1484 aa11.64□□□□□ -0.55
AL035555.1-201ENST00000404462 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.64□□□□□ -0.55
AL035555.1-201ENST00000404462 EIF4G1Q04637 1599 aaKnown RBP11.64□□□□□ -0.55
AL035555.1-201ENST00000404462 DIEXFQ68CQ4 756 aaKnown RBP11.63□□□□□ -0.55
AL035555.1-201ENST00000404462 HOXD11P31277 338 aaPredicted RBP11.62□□□□□ -0.55
AL035555.1-201ENST00000404462 ZNF326Q5BKZ1 582 aaKnown RBP11.62□□□□□ -0.55
AL035555.1-201ENST00000404462 NBR1Q14596 966 aa11.61□□□□□ -0.55
AL035555.1-201ENST00000404462 POLR3GLQ9BT43 218 aa11.6□□□□□ -0.55
AL035555.1-201ENST00000404462 BAZ1AQ9NRL2 1556 aaPredicted RBP11.6□□□□□ -0.55
AL035555.1-201ENST00000404462 RSPH4AQ5TD94 716 aa11.57□□□□□ -0.56
AL035555.1-201ENST00000404462 WIZO95785 1651 aa11.57□□□□□ -0.56
AL035555.1-201ENST00000404462 ZBTB7CA1YPR0 619 aa11.55□□□□□ -0.56
AL035555.1-201ENST00000404462 TNIKQ9UKE5 1360 aa11.53□□□□□ -0.56
AL035555.1-201ENST00000404462 EEA1Q15075 1411 aa11.52□□□□□ -0.57
AL035555.1-201ENST00000404462 ZNF316A6NFI3 1004 aaPredicted RBP11.51□□□□□ -0.57
AL035555.1-201ENST00000404462 RNF216Q9NWF9 866 aaPredicted RBP11.51□□□□□ -0.57
AL035555.1-201ENST00000404462 CEP162Q5TB80 1403 aa11.5□□□□□ -0.57
AL035555.1-201ENST00000404462 TOP2AP11388 1531 aaKnown RBP11.48□□□□□ -0.57
AL035555.1-201ENST00000404462 CFAP44Q96MT7 982 aa11.46□□□□□ -0.57
AL035555.1-201ENST00000404462 CCDC88BA6NC98 1476 aa11.44□□□□□ -0.58
AL035555.1-201ENST00000404462 NPM3O75607 178 aaKnown RBP11.43□□□□□ -0.58
AL035555.1-201ENST00000404462 ANO8Q9HCE9 1232 aaPredicted RBP11.43□□□□□ -0.58
AL035555.1-201ENST00000404462 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.41□□□□□ -0.58
AL035555.1-201ENST00000404462 RNF39Q9H2S5 420 aa11.41□□□□□ -0.58
AL035555.1-201ENST00000404462 SMARCA2P51531 1590 aa11.4□□□□□ -0.58
AL035555.1-201ENST00000404462 ABCC8Q09428 1581 aa11.4□□□□□ -0.58
AL035555.1-201ENST00000404462 POTEHQ6S545 545 aa11.39□□□□□ -0.59
AL035555.1-201ENST00000404462 PAXIP1Q6ZW49 1069 aaPredicted RBP11.39□□□□□ -0.59
AL035555.1-201ENST00000404462 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.39□□□□□ -0.59
AL035555.1-201ENST00000404462 SOGA1O94964 1423 aa11.39□□□□□ -0.59
AL035555.1-201ENST00000404462 RSPH6AQ9H0K4 717 aa11.39□□□□□ -0.59
AL035555.1-201ENST00000404462 GOLGA3Q08378 1498 aa11.38□□□□□ -0.59
AL035555.1-201ENST00000404462 TICAM2Q86XR7 235 aa11.37□□□□□ -0.59
AL035555.1-201ENST00000404462 CCDC136Q96JN2 1154 aa11.36□□□□□ -0.59
AL035555.1-201ENST00000404462 SMARCA4P51532 1647 aa11.36□□□□□ -0.59
AL035555.1-201ENST00000404462 NAP1L5Q96NT1 182 aaPredicted RBP11.36□□□□□ -0.59
AL035555.1-201ENST00000404462 ARID3AQ99856 593 aa11.36□□□□□ -0.59
AL035555.1-201ENST00000404462 AAMPQ13685 434 aa11.35□□□□□ -0.59
AL035555.1-201ENST00000404462 ANP32EQ9BTT0 268 aa11.35□□□□□ -0.59
AL035555.1-201ENST00000404462 NECTIN2Q92692 538 aa11.34□□□□□ -0.59
AL035555.1-201ENST00000404462 CLSPNQ9HAW4 1339 aa11.34□□□□□ -0.59
AL035555.1-201ENST00000404462 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.33□□□□□ -0.59
AL035555.1-201ENST00000404462 MIER1Q8N108 512 aa11.33□□□□□ -0.6
AL035555.1-201ENST00000404462 CLSTN1O94985 981 aa11.32□□□□□ -0.6
AL035555.1-201ENST00000404462 TSHZ2Q9NRE2 1034 aa11.31□□□□□ -0.6
AL035555.1-201ENST00000404462 RUSC2Q8N2Y8 1516 aa11.3□□□□□ -0.6
AL035555.1-201ENST00000404462 KIF21BO75037 1637 aa11.29□□□□□ -0.6
AL035555.1-201ENST00000404462 CEP164Q9UPV0 1460 aa11.29□□□□□ -0.6
AL035555.1-201ENST00000404462 NPM1P06748 294 aaKnown RBP eCLIP11.29□□□□□ -0.6
AL035555.1-201ENST00000404462 BBXQ8WY36 941 aaPredicted RBP11.29□□□□□ -0.6
AL035555.1-201ENST00000404462 C1QBPQ07021 282 aaKnown RBP11.27□□□□□ -0.61
AL035555.1-201ENST00000404462 ZNF592Q92610 1267 aa11.26□□□□□ -0.61
AL035555.1-201ENST00000404462 DNAJC5BQ9UF47 199 aa11.26□□□□□ -0.61
AL035555.1-201ENST00000404462 BAZ1BQ9UIG0 1483 aaKnown RBP11.26□□□□□ -0.61
AL035555.1-201ENST00000404462 YTHDC1Q96MU7 727 aaKnown RBP11.26□□□□□ -0.61
AL035555.1-201ENST00000404462 VPS8Q8N3P4 1428 aa11.25□□□□□ -0.61
AL035555.1-201ENST00000404462 PSMD1Q99460 953 aa11.25□□□□□ -0.61
AL035555.1-201ENST00000404462 IRX6P78412 446 aaPredicted RBP11.24□□□□□ -0.61
AL035555.1-201ENST00000404462 CLIP1P30622 1438 aa11.23□□□□□ -0.61
AL035555.1-201ENST00000404462 BRPF3Q9ULD4 1205 aa11.23□□□□□ -0.61
AL035555.1-201ENST00000404462 A0A0U1RQG5 324 aaPredicted RBP11.23□□□□□ -0.61
AL035555.1-201ENST00000404462 ERICH6BQ5W0A0 696 aa11.22□□□□□ -0.61
AL035555.1-201ENST00000404462 ZFP91Q96JP5 570 aaPredicted RBP11.21□□□□□ -0.61
AL035555.1-201ENST00000404462 HNRNPUL2Q1KMD3 747 aaKnown RBP11.21□□□□□ -0.62
AL035555.1-201ENST00000404462 ZMYND15Q9H091 742 aa11.21□□□□□ -0.62
AL035555.1-201ENST00000404462 FOXD4L1Q9NU39 408 aa11.2□□□□□ -0.62
AL035555.1-201ENST00000404462 PEG3Q9GZU2 1588 aa11.19□□□□□ -0.62
AL035555.1-201ENST00000404462 RAD21O60216 631 aa11.19□□□□□ -0.62
AL035555.1-201ENST00000404462 KCTD17Q8N5Z5 321 aa11.18□□□□□ -0.62
AL035555.1-201ENST00000404462 NCLP19338 710 aaKnown RBP11.16□□□□□ -0.62
AL035555.1-201ENST00000404462 BRPF1P55201 1214 aaPredicted RBP11.16□□□□□ -0.62
AL035555.1-201ENST00000404462 CC2D2BQ6DHV5 1058 aa11.16□□□□□ -0.62
AL035555.1-201ENST00000404462 ZNF692Q9BU19 519 aaPredicted RBP11.16□□□□□ -0.62
AL035555.1-201ENST00000404462 SYNJ1O43426 1573 aa11.15□□□□□ -0.62
AL035555.1-201ENST00000404462 TRHP20396 242 aaPredicted RBP11.15□□□□□ -0.62
AL035555.1-201ENST00000404462 RGS22Q8NE09 1264 aa11.15□□□□□ -0.62
AL035555.1-201ENST00000404462 CERS3Q8IU89 383 aa11.14□□□□□ -0.63
AL035555.1-201ENST00000404462 DHX57Q6P158 1386 aaKnown RBP11.14□□□□□ -0.63
AL035555.1-201ENST00000404462 DNAJC5Q9H3Z4 198 aa11.13□□□□□ -0.63
AL035555.1-201ENST00000404462 C1orf115Q9H7X2 142 aa11.13□□□□□ -0.63
AL035555.1-201ENST00000404462 SUPT16HQ9Y5B9 1047 aaKnown RBP11.13□□□□□ -0.63
AL035555.1-201ENST00000404462 RBM10P98175 930 aaKnown RBP11.12□□□□□ -0.63
AL035555.1-201ENST00000404462 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.11□□□□□ -0.63
AL035555.1-201ENST00000404462 CWC22Q9HCG8 908 aaKnown RBP11.11□□□□□ -0.63
AL035555.1-201ENST00000404462 UNC13AQ9UPW8 1703 aa11.11□□□□□ -0.63
AL035555.1-201ENST00000404462 RAPGEF2Q9Y4G8 1499 aa11.11□□□□□ -0.63
AL035555.1-201ENST00000404462 RBM25P49756 843 aaKnown RBP11.11□□□□□ -0.63
AL035555.1-201ENST00000404462 ARID4BQ4LE39 1312 aaPredicted RBP11.1□□□□□ -0.63
AL035555.1-201ENST00000404462 GLIPR1L2Q4G1C9 344 aa11.1□□□□□ -0.63
AL035555.1-201ENST00000404462 CUX2O14529 1486 aa11.1□□□□□ -0.63
AL035555.1-201ENST00000404462 TMED8Q6PL24 325 aaPredicted RBP11.09□□□□□ -0.63
AL035555.1-201ENST00000404462 FAM177A1Q8N128 213 aaPredicted RBP11.09□□□□□ -0.63
AL035555.1-201ENST00000404462 MTMR7Q9Y216 660 aa11.08□□□□□ -0.64
AL035555.1-201ENST00000404462 ZNF428Q96B54 188 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms