RNA–Protein interactions for RNA: ENST00000404125.5

PSME4-202, Transcript of proteasome activator subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSME4, Length 7,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-202ENST00000404125 TSPY10P0CW01 314 aa18.67■□□□□ 0.58
PSME4-202ENST00000404125 ARXQ96QS3 562 aa18.67■□□□□ 0.58
PSME4-202ENST00000404125 PPP1R15AO75807 674 aaPredicted RBP18.64■□□□□ 0.57
PSME4-202ENST00000404125 LMOD2Q6P5Q4 547 aa18.63■□□□□ 0.57
PSME4-202ENST00000404125 TNNT2P45379 298 aaPredicted RBP18.62■□□□□ 0.57
PSME4-202ENST00000404125 EIF4G1Q04637 1599 aaKnown RBP18.59■□□□□ 0.57
PSME4-202ENST00000404125 SOX12O15370 315 aa18.59■□□□□ 0.57
PSME4-202ENST00000404125 BAZ1BQ9UIG0 1483 aaKnown RBP18.57■□□□□ 0.56
PSME4-202ENST00000404125 ACIN1Q9UKV3 1341 aaKnown RBP18.55■□□□□ 0.56
PSME4-202ENST00000404125 CLIP1P30622 1438 aa18.53■□□□□ 0.56
PSME4-202ENST00000404125 SAFB2Q14151 953 aaKnown RBP eCLIP18.53■□□□□ 0.56
PSME4-202ENST00000404125 HAP1P54257 671 aaPredicted RBP18.53■□□□□ 0.56
PSME4-202ENST00000404125 MIER1Q8N108 512 aa18.52■□□□□ 0.56
PSME4-202ENST00000404125 SIN3AQ96ST3 1273 aa18.51■□□□□ 0.55
PSME4-202ENST00000404125 PLEKHD1A6NEE1 506 aa18.5■□□□□ 0.55
PSME4-202ENST00000404125 NEUROD2Q15784 382 aa18.5■□□□□ 0.55
PSME4-202ENST00000404125 RSF1Q96T23 1441 aaPredicted RBP18.5■□□□□ 0.55
PSME4-202ENST00000404125 TPRNQ4KMQ1 711 aa18.5■□□□□ 0.55
PSME4-202ENST00000404125 CECR2Q9BXF3 1484 aa18.5■□□□□ 0.55
PSME4-202ENST00000404125 TAOK2Q9UL54 1235 aa18.5■□□□□ 0.55
PSME4-202ENST00000404125 WDR43Q15061 677 aaKnown RBP eCLIP18.5■□□□□ 0.555e-7■□□□□ 9.9
PSME4-202ENST00000404125 MRS2Q9HD23 443 aa18.49■□□□□ 0.55
PSME4-202ENST00000404125 LAS1LQ9Y4W2 734 aaKnown RBP18.48■□□□□ 0.55
PSME4-202ENST00000404125 FOXD1Q16676 465 aa18.47■□□□□ 0.55
PSME4-202ENST00000404125 CFDP1Q9UEE9 299 aaPredicted RBP18.45■□□□□ 0.54
PSME4-202ENST00000404125 NBR1Q14596 966 aa18.44■□□□□ 0.54
PSME4-202ENST00000404125 HSP90AA1P07900 732 aaKnown RBP18.42■□□□□ 0.54
PSME4-202ENST00000404125 ABCC8Q09428 1581 aa18.42■□□□□ 0.54
PSME4-202ENST00000404125 CEP162Q5TB80 1403 aa18.4■□□□□ 0.54
PSME4-202ENST00000404125 CC2D1BQ5T0F9 858 aaKnown RBP18.39■□□□□ 0.53
PSME4-202ENST00000404125 NUTM2DQ5VT03 806 aaPredicted RBP18.39■□□□□ 0.53
PSME4-202ENST00000404125 WRNQ14191 1432 aaPredicted RBP eCLIP18.37■□□□□ 0.53
PSME4-202ENST00000404125 TULP1O00294 542 aaPredicted RBP18.35■□□□□ 0.53
PSME4-202ENST00000404125 STK26Q9P289 416 aa18.34■□□□□ 0.53
PSME4-202ENST00000404125 ANP32AP39687 249 aaKnown RBP18.34■□□□□ 0.53
PSME4-202ENST00000404125 SOGA1O94964 1423 aa18.32■□□□□ 0.52
PSME4-202ENST00000404125 CCDC136Q96JN2 1154 aa18.32■□□□□ 0.52
PSME4-202ENST00000404125 GGT6Q6P531 493 aa18.31■□□□□ 0.52
PSME4-202ENST00000404125 CARD11Q9BXL7 1154 aa18.28■□□□□ 0.52
PSME4-202ENST00000404125 EIF4G2P78344 907 aaKnown RBP eCLIP18.28■□□□□ 0.526e-6■■■■□ 25.1
PSME4-202ENST00000404125 POGKQ9P215 609 aa18.27■□□□□ 0.52
PSME4-202ENST00000404125 GOLGA3Q08378 1498 aa18.27■□□□□ 0.51
PSME4-202ENST00000404125 NACADO15069 1562 aa18.24■□□□□ 0.51
PSME4-202ENST00000404125 CUX2O14529 1486 aa18.23■□□□□ 0.51
PSME4-202ENST00000404125 WIZO95785 1651 aa18.23■□□□□ 0.51
PSME4-202ENST00000404125 DCAF11Q8TEB1 546 aa18.22■□□□□ 0.51
PSME4-202ENST00000404125 KIF27Q86VH2 1401 aa18.21■□□□□ 0.51
PSME4-202ENST00000404125 NUTM2FA1L443 756 aa18.21■□□□□ 0.51
PSME4-202ENST00000404125 TDRD9Q8NDG6 1382 aaKnown RBP18.21■□□□□ 0.51
PSME4-202ENST00000404125 U2SURPO15042 1029 aaKnown RBP18.2■□□□□ 0.5
PSME4-202ENST00000404125 NPHP1O15259 732 aa18.16■□□□□ 0.5
PSME4-202ENST00000404125 KANK4Q5T7N3 995 aaPredicted RBP18.16■□□□□ 0.5
PSME4-202ENST00000404125 PAK3O75914 559 aaPredicted RBP18.15■□□□□ 0.5
PSME4-202ENST00000404125 MROH2BQ7Z745 1585 aa18.15■□□□□ 0.5
PSME4-202ENST00000404125 FRAT1Q92837 279 aaPredicted RBP18.14■□□□□ 0.5
PSME4-202ENST00000404125 SUPT16HQ9Y5B9 1047 aaKnown RBP18.14■□□□□ 0.5
PSME4-202ENST00000404125 KNSTRNQ9Y448 316 aa18.14■□□□□ 0.49
PSME4-202ENST00000404125 AMER1Q5JTC6 1135 aaPredicted RBP18.14■□□□□ 0.49
PSME4-202ENST00000404125 SRPK2P78362 688 aaKnown RBP18.12■□□□□ 0.49
PSME4-202ENST00000404125 EEA1Q15075 1411 aa18.1■□□□□ 0.49
PSME4-202ENST00000404125 UPF2Q9HAU5 1272 aaKnown RBP18.1■□□□□ 0.49
PSME4-202ENST00000404125 CARMIL1Q5VZK9 1371 aa18.1■□□□□ 0.49
PSME4-202ENST00000404125 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.1■□□□□ 0.49
PSME4-202ENST00000404125 CCDC88BA6NC98 1476 aa18.09■□□□□ 0.49
PSME4-202ENST00000404125 HNRNPMP52272 730 aaKnown RBP eCLIP18.09■□□□□ 0.493e-13■■■□□ 17.2
PSME4-202ENST00000404125 CCNB3Q8WWL7 1395 aa18.08■□□□□ 0.48
PSME4-202ENST00000404125 ZNF330Q9Y3S2 320 aaPredicted RBP18.06■□□□□ 0.48
PSME4-202ENST00000404125 MYH16Q9H6N6 1097 aa18.05■□□□□ 0.48
PSME4-202ENST00000404125 EIF5BO60841 1220 aaKnown RBP18.03■□□□□ 0.48
PSME4-202ENST00000404125 CYB5RLQ6IPT4 315 aa18.03■□□□□ 0.48
PSME4-202ENST00000404125 BAZ1AQ9NRL2 1556 aaPredicted RBP18.03■□□□□ 0.48
PSME4-202ENST00000404125 TNIKQ9UKE5 1360 aa18.02■□□□□ 0.48
PSME4-202ENST00000404125 RGS3P49796 1198 aa18.01■□□□□ 0.47
PSME4-202ENST00000404125 CEP164Q9UPV0 1460 aa18.01■□□□□ 0.47
PSME4-202ENST00000404125 FTSJ3Q8IY81 847 aaKnown RBP18.01■□□□□ 0.47
PSME4-202ENST00000404125 APBB1O00213 710 aa18■□□□□ 0.47
PSME4-202ENST00000404125 PKD2Q13563 968 aa17.97■□□□□ 0.47
PSME4-202ENST00000404125 CCDC9Q9Y3X0 531 aaKnown RBP17.96■□□□□ 0.47
PSME4-202ENST00000404125 SMARCA2P51531 1590 aa17.96■□□□□ 0.47
PSME4-202ENST00000404125 SPRYD3Q8NCJ5 442 aa17.96■□□□□ 0.47
PSME4-202ENST00000404125 MAPK8IP3Q9UPT6 1336 aa17.95■□□□□ 0.46
PSME4-202ENST00000404125 CFAP53Q96M91 514 aa17.95■□□□□ 0.46
PSME4-202ENST00000404125 NAP1L2Q9ULW6 460 aaPredicted RBP17.93■□□□□ 0.46
PSME4-202ENST00000404125 NCLP19338 710 aaKnown RBP17.93■□□□□ 0.46
PSME4-202ENST00000404125 B4GALNT3Q6L9W6 998 aa17.92■□□□□ 0.46
PSME4-202ENST00000404125 LTV1Q96GA3 475 aaPredicted RBP17.92■□□□□ 0.46
PSME4-202ENST00000404125 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.91■□□□□ 0.46
PSME4-202ENST00000404125 KIF3BO15066 747 aa17.91■□□□□ 0.46
PSME4-202ENST00000404125 OS9Q13438 667 aaPredicted RBP17.89■□□□□ 0.45
PSME4-202ENST00000404125 FHOD3Q2V2M9 1422 aa17.88■□□□□ 0.45
PSME4-202ENST00000404125 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.87■□□□□ 0.45
PSME4-202ENST00000404125 HSPA5P11021 654 aaKnown RBP17.87■□□□□ 0.45
PSME4-202ENST00000404125 ANP32BQ92688 251 aaKnown RBP17.86■□□□□ 0.45
PSME4-202ENST00000404125 RUSC2Q8N2Y8 1516 aa17.86■□□□□ 0.45
PSME4-202ENST00000404125 CCDC146Q8IYE0 955 aa17.86■□□□□ 0.45
PSME4-202ENST00000404125 CSB-PGBD3P0DP91 1061 aa17.86■□□□□ 0.45
PSME4-202ENST00000404125 MORC1Q86VD1 984 aa17.84■□□□□ 0.45
PSME4-202ENST00000404125 NCBP3Q53F19 620 aaKnown RBP17.83■□□□□ 0.45
PSME4-202ENST00000404125 KANK1Q14678 1352 aa17.83■□□□□ 0.44
PSME4-202ENST00000404125 TMF1P82094 1093 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms