RNA–Protein interactions for RNA: ENST00000402468.3

C1GALT1-202, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene C1GALT1, Length 930 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-202ENST00000402468 DCBLD2Q96PD2 775 aa9.7□□□□□ -0.86
C1GALT1-202ENST00000402468 PKD2Q13563 968 aa9.69□□□□□ -0.86
C1GALT1-202ENST00000402468 CREBZFQ9NS37 354 aa9.69□□□□□ -0.86
C1GALT1-202ENST00000402468 ZRANB1Q9UGI0 708 aa9.69□□□□□ -0.86
C1GALT1-202ENST00000402468 ECM2O94769 699 aaPredicted RBP9.65□□□□□ -0.86
C1GALT1-202ENST00000402468 GALR2O43603 387 aaPredicted RBP9.6□□□□□ -0.87
C1GALT1-202ENST00000402468 PLCB2Q00722 1185 aa9.6□□□□□ -0.87
C1GALT1-202ENST00000402468 CIZ1Q9ULV3 898 aaPredicted RBP9.58□□□□□ -0.88
C1GALT1-202ENST00000402468 TRIM41Q8WV44 630 aa9.57□□□□□ -0.88
C1GALT1-202ENST00000402468 PAK3O75914 559 aaPredicted RBP9.54□□□□□ -0.88
C1GALT1-202ENST00000402468 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.54□□□□□ -0.88
C1GALT1-202ENST00000402468 PHF12Q96QT6 1004 aa9.53□□□□□ -0.88
C1GALT1-202ENST00000402468 GSE1Q14687 1217 aa9.51□□□□□ -0.89
C1GALT1-202ENST00000402468 OTUD5Q96G74 571 aa9.51□□□□□ -0.89
C1GALT1-202ENST00000402468 POTEB2H3BUK9 544 aa9.5□□□□□ -0.89
C1GALT1-202ENST00000402468 MNX1P50219 401 aaPredicted RBP9.5□□□□□ -0.89
C1GALT1-202ENST00000402468 HAP1P54257 671 aaPredicted RBP9.5□□□□□ -0.89
C1GALT1-202ENST00000402468 NPM1P06748 294 aaKnown RBP eCLIP9.49□□□□□ -0.89
C1GALT1-202ENST00000402468 BBXQ8WY36 941 aaPredicted RBP9.49□□□□□ -0.89
C1GALT1-202ENST00000402468 RGL2O15211 777 aa9.47□□□□□ -0.89
C1GALT1-202ENST00000402468 PELP1Q8IZL8 1130 aaKnown RBP9.45□□□□□ -0.9
C1GALT1-202ENST00000402468 TAOK2Q9UL54 1235 aa9.44□□□□□ -0.9
C1GALT1-202ENST00000402468 FAM212AQ96EL1 285 aa9.43□□□□□ -0.9
C1GALT1-202ENST00000402468 DCAF8Q5TAQ9 597 aa9.42□□□□□ -0.9
C1GALT1-202ENST00000402468 NUBP1P53384 320 aa9.41□□□□□ -0.9
C1GALT1-202ENST00000402468 MS4A3Q96HJ5 214 aa9.4□□□□□ -0.9
C1GALT1-202ENST00000402468 PAXIP1Q6ZW49 1069 aaPredicted RBP9.39□□□□□ -0.91
C1GALT1-202ENST00000402468 CHGAP10645 457 aaKnown RBP9.38□□□□□ -0.91
C1GALT1-202ENST00000402468 ASTLQ6HA08 431 aaPredicted RBP9.38□□□□□ -0.91
C1GALT1-202ENST00000402468 VSIG10Q8N0Z9 540 aa9.37□□□□□ -0.91
C1GALT1-202ENST00000402468 CFAP44Q96MT7 982 aa9.37□□□□□ -0.91
C1GALT1-202ENST00000402468 METRNQ9UJH8 293 aa9.37□□□□□ -0.91
C1GALT1-202ENST00000402468 POTEMA6NI47 508 aa9.36□□□□□ -0.91
C1GALT1-202ENST00000402468 ATMINO43313 823 aaPredicted RBP9.36□□□□□ -0.91
C1GALT1-202ENST00000402468 SPRYD3Q8NCJ5 442 aa9.36□□□□□ -0.91
C1GALT1-202ENST00000402468 C7P10643 843 aa9.34□□□□□ -0.91
C1GALT1-202ENST00000402468 POTEGQ6S5H5 508 aa9.34□□□□□ -0.91
C1GALT1-202ENST00000402468 SLC39A7Q92504 469 aa9.34□□□□□ -0.91
C1GALT1-202ENST00000402468 TSPYL2Q9H2G4 693 aaPredicted RBP9.33□□□□□ -0.92
C1GALT1-202ENST00000402468 RIOK3O14730 519 aaKnown RBP9.32□□□□□ -0.92
C1GALT1-202ENST00000402468 POTEJP0CG39 1038 aa9.32□□□□□ -0.92
C1GALT1-202ENST00000402468 HS6ST3Q8IZP7 471 aa9.32□□□□□ -0.92
C1GALT1-202ENST00000402468 CHRM1P11229 460 aaPredicted RBP9.29□□□□□ -0.92
C1GALT1-202ENST00000402468 CCDC61Q9Y6R9 512 aa9.29□□□□□ -0.92
C1GALT1-202ENST00000402468 RASEFQ8IZ41 740 aa9.28□□□□□ -0.92
C1GALT1-202ENST00000402468 VGFO15240 615 aaPredicted RBP9.27□□□□□ -0.93
C1GALT1-202ENST00000402468 ATN1P54259 1190 aaPredicted RBP9.27□□□□□ -0.93
C1GALT1-202ENST00000402468 MAMSTRQ6ZN01 415 aa9.27□□□□□ -0.93
C1GALT1-202ENST00000402468 RNF25Q96BH1 459 aaPredicted RBP9.27□□□□□ -0.93
C1GALT1-202ENST00000402468 KIF12Q96FN5 646 aa9.25□□□□□ -0.93
C1GALT1-202ENST00000402468 BCANQ96GW7 911 aa9.24□□□□□ -0.93
C1GALT1-202ENST00000402468 DNAJC5Q9H3Z4 198 aa9.24□□□□□ -0.93
C1GALT1-202ENST00000402468 STK25O00506 426 aa9.23□□□□□ -0.93
C1GALT1-202ENST00000402468 BMP2KQ9NSY1 1161 aaPredicted RBP9.22□□□□□ -0.93
C1GALT1-202ENST00000402468 PYGBP11216 843 aa9.21□□□□□ -0.94
C1GALT1-202ENST00000402468 SCUBE2Q9NQ36 999 aa9.21□□□□□ -0.94
C1GALT1-202ENST00000402468 PCDH10Q9P2E7 1040 aa9.21□□□□□ -0.94
C1GALT1-202ENST00000402468 TRPC6Q9Y210 931 aa9.21□□□□□ -0.94
C1GALT1-202ENST00000402468 POTEFA5A3E0 1075 aa9.2□□□□□ -0.94
C1GALT1-202ENST00000402468 LCE2DQ5TA82 110 aaPredicted RBP9.2□□□□□ -0.94
C1GALT1-202ENST00000402468 RYDENQ9NUL5 291 aaKnown RBP9.2□□□□□ -0.94
C1GALT1-202ENST00000402468 MAP3K13O43283 966 aa9.19□□□□□ -0.94
C1GALT1-202ENST00000402468 SGIP1Q9BQI5 828 aa9.19□□□□□ -0.94
C1GALT1-202ENST00000402468 FAM163AQ96GL9 167 aaPredicted RBP9.18□□□□□ -0.94
C1GALT1-202ENST00000402468 TIE1P35590 1138 aa9.17□□□□□ -0.94
C1GALT1-202ENST00000402468 ZNF467Q7Z7K2 595 aaPredicted RBP9.17□□□□□ -0.94
C1GALT1-202ENST00000402468 STK24Q9Y6E0 443 aa9.16□□□□□ -0.94
C1GALT1-202ENST00000402468 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.15□□□□□ -0.94
C1GALT1-202ENST00000402468 ZFP91Q96JP5 570 aaPredicted RBP9.15□□□□□ -0.94
C1GALT1-202ENST00000402468 TSHZ2Q9NRE2 1034 aa9.15□□□□□ -0.94
C1GALT1-202ENST00000402468 BCL11BQ9C0K0 894 aaPredicted RBP9.14□□□□□ -0.95
C1GALT1-202ENST00000402468 KDM2AQ9Y2K7 1162 aa9.14□□□□□ -0.95
C1GALT1-202ENST00000402468 TTLL13PA6NNM8 815 aa9.12□□□□□ -0.95
C1GALT1-202ENST00000402468 COLQQ9Y215 455 aaPredicted RBP9.11□□□□□ -0.95
C1GALT1-202ENST00000402468 NKX1-1Q15270 411 aaPredicted RBP9.1□□□□□ -0.95
C1GALT1-202ENST00000402468 SEC24BO95487 1268 aa9.09□□□□□ -0.95
C1GALT1-202ENST00000402468 PDAP1Q13442 181 aaKnown RBP9.09□□□□□ -0.95
C1GALT1-202ENST00000402468 GTPBP6O43824 516 aaPredicted RBP9.08□□□□□ -0.96
C1GALT1-202ENST00000402468 TRIM35Q9UPQ4 493 aa9.06□□□□□ -0.96
C1GALT1-202ENST00000402468 PCDHB13Q9Y5F0 798 aa9.06□□□□□ -0.96
C1GALT1-202ENST00000402468 IER5LQ5T953 404 aa9.04□□□□□ -0.96
C1GALT1-202ENST00000402468 NBR1Q14596 966 aa9.02□□□□□ -0.97
C1GALT1-202ENST00000402468 PSEN1P49768 467 aa9.01□□□□□ -0.97
C1GALT1-202ENST00000402468 PCDHB8Q9UN66 801 aa9.01□□□□□ -0.97
C1GALT1-202ENST00000402468 IFNL1Q8IU54 200 aa9□□□□□ -0.97
C1GALT1-202ENST00000402468 CDAN1Q8IWY9 1227 aa8.97□□□□□ -0.97
C1GALT1-202ENST00000402468 SLAIN1Q8ND83 568 aa8.97□□□□□ -0.97
C1GALT1-202ENST00000402468 TMEM106CQ9BVX2 250 aa8.97□□□□□ -0.97
C1GALT1-202ENST00000402468 PLCG2P16885 1265 aa8.94□□□□□ -0.98
C1GALT1-202ENST00000402468 ST18O60284 1047 aa8.93□□□□□ -0.98
C1GALT1-202ENST00000402468 WDR70Q9NW82 654 aa8.92□□□□□ -0.98
C1GALT1-202ENST00000402468 IRX5P78411 483 aaPredicted RBP8.91□□□□□ -0.98
C1GALT1-202ENST00000402468 P3H3Q8IVL6 736 aa8.91□□□□□ -0.98
C1GALT1-202ENST00000402468 SOX12O15370 315 aa8.9□□□□□ -0.98
C1GALT1-202ENST00000402468 NLRP6P59044 892 aa8.9□□□□□ -0.98
C1GALT1-202ENST00000402468 CABP2Q9NPB3 220 aa8.9□□□□□ -0.98
C1GALT1-202ENST00000402468 GOLGA2Q08379 1002 aa8.89□□□□□ -0.99
C1GALT1-202ENST00000402468 MFRPQ9BY79 579 aa8.88□□□□□ -0.99
C1GALT1-202ENST00000402468 TPRNQ4KMQ1 711 aa8.87□□□□□ -0.99
C1GALT1-202ENST00000402468 EFCAB3Q8N7B9 438 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms