RNA–Protein interactions for RNA: ENST00000401669.6

NRXN1-204, Transcript of neurexin 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NRXN1, Length 5,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-204ENST00000401669 NBR1Q14596 966 aa21.28■■□□□ 1
NRXN1-204ENST00000401669 ARID4BQ4LE39 1312 aaPredicted RBP21.27■□□□□ 0.99
NRXN1-204ENST00000401669 CHMP7Q8WUX9 453 aaPredicted RBP21.25■□□□□ 0.99
NRXN1-204ENST00000401669 NPHP1O15259 732 aa21.23■□□□□ 0.99
NRXN1-204ENST00000401669 ZRSR1Q15695 479 aaKnown RBP21.22■□□□□ 0.99
NRXN1-204ENST00000401669 KCNH8Q96L42 1107 aa21.19■□□□□ 0.98
NRXN1-204ENST00000401669 LMOD2Q6P5Q4 547 aa21.15■□□□□ 0.98
NRXN1-204ENST00000401669 PPM1GO15355 546 aaPredicted RBP21.14■□□□□ 0.98
NRXN1-204ENST00000401669 MTUS2Q5JR59 1369 aa21.14■□□□□ 0.97
NRXN1-204ENST00000401669 GOLGA6L22H0YM25 854 aa21.14■□□□□ 0.97
NRXN1-204ENST00000401669 BECN1Q14457 450 aa21.13■□□□□ 0.97
NRXN1-204ENST00000401669 CFAP53Q96M91 514 aa21.12■□□□□ 0.97
NRXN1-204ENST00000401669 TRIM44Q96DX7 344 aaPredicted RBP21.1■□□□□ 0.97
NRXN1-204ENST00000401669 TPRNQ4KMQ1 711 aa21.09■□□□□ 0.97
NRXN1-204ENST00000401669 IRX6P78412 446 aaPredicted RBP21.08■□□□□ 0.97
NRXN1-204ENST00000401669 CASC1Q6TDU7 716 aa21.08■□□□□ 0.97
NRXN1-204ENST00000401669 TAOK2Q9UL54 1235 aa21.06■□□□□ 0.96
NRXN1-204ENST00000401669 RGL3Q3MIN7 710 aa21.06■□□□□ 0.96
NRXN1-204ENST00000401669 PTMAP06454 111 aaKnown RBP21.04■□□□□ 0.96
NRXN1-204ENST00000401669 EIF4G2P78344 907 aaKnown RBP eCLIP21.04■□□□□ 0.96
NRXN1-204ENST00000401669 RRP7BPQ9NSQ0 103 aa21.02■□□□□ 0.96
NRXN1-204ENST00000401669 HIRIP3Q9BW71 556 aaPredicted RBP21.02■□□□□ 0.95
NRXN1-204ENST00000401669 LAS1LQ9Y4W2 734 aaKnown RBP21.01■□□□□ 0.95
NRXN1-204ENST00000401669 DDRGK1Q96HY6 314 aa21.01■□□□□ 0.95
NRXN1-204ENST00000401669 ANP32EQ9BTT0 268 aa21.01■□□□□ 0.95
NRXN1-204ENST00000401669 PLEKHD1A6NEE1 506 aa21■□□□□ 0.95
NRXN1-204ENST00000401669 FTSJ3Q8IY81 847 aaKnown RBP21■□□□□ 0.95
NRXN1-204ENST00000401669 ZCCHC6Q5VYS8 1495 aaKnown RBP20.97■□□□□ 0.95
NRXN1-204ENST00000401669 NCBP3Q53F19 620 aaKnown RBP20.97■□□□□ 0.95
NRXN1-204ENST00000401669 GOLGA2Q08379 1002 aa20.97■□□□□ 0.95
NRXN1-204ENST00000401669 CDCA8Q53HL2 280 aa20.97■□□□□ 0.95
NRXN1-204ENST00000401669 KNSTRNQ9Y448 316 aa20.97■□□□□ 0.95
NRXN1-204ENST00000401669 MAPK8IP3Q9UPT6 1336 aa20.96■□□□□ 0.95
NRXN1-204ENST00000401669 CCDC180Q9P1Z9 1646 aa20.95■□□□□ 0.94
NRXN1-204ENST00000401669 DNTTIP2Q5QJE6 756 aaKnown RBP20.94■□□□□ 0.94
NRXN1-204ENST00000401669 POGKQ9P215 609 aa20.94■□□□□ 0.94
NRXN1-204ENST00000401669 FGD1P98174 961 aa20.94■□□□□ 0.94
NRXN1-204ENST00000401669 OS9Q13438 667 aaPredicted RBP20.94■□□□□ 0.94
NRXN1-204ENST00000401669 NEUROD2Q15784 382 aa20.93■□□□□ 0.94
NRXN1-204ENST00000401669 NUDCQ9Y266 331 aa20.91■□□□□ 0.94
NRXN1-204ENST00000401669 NAP1L2Q9ULW6 460 aaPredicted RBP20.89■□□□□ 0.94
NRXN1-204ENST00000401669 CLSTN1O94985 981 aa20.89■□□□□ 0.93
NRXN1-204ENST00000401669 SCRIBQ14160 1630 aa20.88■□□□□ 0.93
NRXN1-204ENST00000401669 SENP3-EIF4A1A0A087X0R7 540 aa20.88■□□□□ 0.93
NRXN1-204ENST00000401669 TNNT2P45379 298 aaPredicted RBP20.87■□□□□ 0.93
NRXN1-204ENST00000401669 PLCB2Q00722 1185 aa20.87■□□□□ 0.93
NRXN1-204ENST00000401669 KCNJ4P48050 445 aa20.86■□□□□ 0.93
NRXN1-204ENST00000401669 ISY1Q9ULR0 285 aaKnown RBP20.83■□□□□ 0.92
NRXN1-204ENST00000401669 GOLGA6L6A8MZA4 724 aa20.82■□□□□ 0.92
NRXN1-204ENST00000401669 TRHP20396 242 aaPredicted RBP20.81■□□□□ 0.92
NRXN1-204ENST00000401669 CARD11Q9BXL7 1154 aa20.8■□□□□ 0.92
NRXN1-204ENST00000401669 CFDP1Q9UEE9 299 aaPredicted RBP20.79■□□□□ 0.92
NRXN1-204ENST00000401669 FRAT1Q92837 279 aaPredicted RBP20.78■□□□□ 0.92
NRXN1-204ENST00000401669 CHMP4BQ9H444 224 aaKnown RBP20.78■□□□□ 0.92
NRXN1-204ENST00000401669 U2SURPO15042 1029 aaKnown RBP20.77■□□□□ 0.92
NRXN1-204ENST00000401669 RSF1Q96T23 1441 aaPredicted RBP20.76■□□□□ 0.91
NRXN1-204ENST00000401669 NRDCO43847 1150 aa20.76■□□□□ 0.91
NRXN1-204ENST00000401669 SOX12O15370 315 aa20.73■□□□□ 0.91
NRXN1-204ENST00000401669 GOLGA6L4A6NEF3 574 aa20.71■□□□□ 0.91
NRXN1-204ENST00000401669 RGS3P49796 1198 aa20.71■□□□□ 0.91
NRXN1-204ENST00000401669 PNNQ9H307 717 aaKnown RBP20.71■□□□□ 0.91
NRXN1-204ENST00000401669 HSP90AB1P08238 724 aaKnown RBP20.7■□□□□ 0.9
NRXN1-204ENST00000401669 MIER1Q8N108 512 aa20.7■□□□□ 0.9
NRXN1-204ENST00000401669 MLECQ14165 292 aa20.69■□□□□ 0.9
NRXN1-204ENST00000401669 MS4A1P11836 297 aa20.68■□□□□ 0.9
NRXN1-204ENST00000401669 HDGFP51858 240 aaKnown RBP20.68■□□□□ 0.9
NRXN1-204ENST00000401669 CLIP1P30622 1438 aa20.65■□□□□ 0.9
NRXN1-204ENST00000401669 CC2D1BQ5T0F9 858 aaKnown RBP20.63■□□□□ 0.89
NRXN1-204ENST00000401669 ERICH6BQ5W0A0 696 aa20.6■□□□□ 0.89
NRXN1-204ENST00000401669 GNL2Q13823 731 aaKnown RBP20.59■□□□□ 0.89
NRXN1-204ENST00000401669 SRPK2P78362 688 aaKnown RBP20.59■□□□□ 0.89
NRXN1-204ENST00000401669 NAP1L5Q96NT1 182 aaPredicted RBP20.59■□□□□ 0.89
NRXN1-204ENST00000401669 TMX4Q9H1E5 349 aaPredicted RBP20.58■□□□□ 0.89
NRXN1-204ENST00000401669 SUPT16HQ9Y5B9 1047 aaKnown RBP20.58■□□□□ 0.88
NRXN1-204ENST00000401669 MCCP23508 829 aa20.58■□□□□ 0.88
NRXN1-204ENST00000401669 RTF1Q92541 710 aaKnown RBP20.58■□□□□ 0.88
NRXN1-204ENST00000401669 ZNF330Q9Y3S2 320 aaPredicted RBP20.56■□□□□ 0.88
NRXN1-204ENST00000401669 L1TD1Q5T7N2 865 aaKnown RBP20.55■□□□□ 0.88
NRXN1-204ENST00000401669 CSB-PGBD3P0DP91 1061 aa20.54■□□□□ 0.88
NRXN1-204ENST00000401669 SAFB2Q14151 953 aaKnown RBP eCLIP20.53■□□□□ 0.88
NRXN1-204ENST00000401669 PRM3Q9NNZ6 103 aa20.53■□□□□ 0.88
NRXN1-204ENST00000401669 CHAF1AQ13111 956 aaPredicted RBP20.52■□□□□ 0.87
NRXN1-204ENST00000401669 HSCBQ8IWL3 235 aa20.52■□□□□ 0.87
NRXN1-204ENST00000401669 DRC7Q8IY82 874 aa20.52■□□□□ 0.87
NRXN1-204ENST00000401669 KANK1Q14678 1352 aa20.51■□□□□ 0.87
NRXN1-204ENST00000401669 TMF1P82094 1093 aa20.51■□□□□ 0.87
NRXN1-204ENST00000401669 CCDC9Q9Y3X0 531 aaKnown RBP20.5■□□□□ 0.87
NRXN1-204ENST00000401669 PAK3O75914 559 aaPredicted RBP20.5■□□□□ 0.87
NRXN1-204ENST00000401669 KIAA2012Q0VF49 1180 aa20.49■□□□□ 0.87
NRXN1-204ENST00000401669 MORC1Q86VD1 984 aa20.48■□□□□ 0.87
NRXN1-204ENST00000401669 KIAA1211Q6ZU35 1233 aa20.45■□□□□ 0.86
NRXN1-204ENST00000401669 APBB1O00213 710 aa20.45■□□□□ 0.86
NRXN1-204ENST00000401669 ERCC6Q03468 1493 aa20.45■□□□□ 0.86
NRXN1-204ENST00000401669 DCAF11Q8TEB1 546 aa20.44■□□□□ 0.86
NRXN1-204ENST00000401669 STK26Q9P289 416 aa20.43■□□□□ 0.86
NRXN1-204ENST00000401669 DCAF1Q9Y4B6 1507 aa20.43■□□□□ 0.86
NRXN1-204ENST00000401669 PPP4R2Q9NY27 417 aa20.42■□□□□ 0.86
NRXN1-204ENST00000401669 G3V3G9 751 aa20.42■□□□□ 0.86
NRXN1-204ENST00000401669 DCAF8Q5TAQ9 597 aa20.42■□□□□ 0.86
NRXN1-204ENST00000401669 CFAP44Q96MT7 982 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms