RNA–Protein interactions for RNA: ENST00000400564.5

SAMSN1-202, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-202ENST00000400564 OTUD5Q96G74 571 aa13.26□□□□□ -0.29
SAMSN1-202ENST00000400564 NPM1P06748 294 aaKnown RBP eCLIP13.21□□□□□ -0.29
SAMSN1-202ENST00000400564 PHF12Q96QT6 1004 aa13.2□□□□□ -0.3
SAMSN1-202ENST00000400564 ZBTB47Q9UFB7 747 aaPredicted RBP13.2□□□□□ -0.3
SAMSN1-202ENST00000400564 POTEMA6NI47 508 aa13.18□□□□□ -0.3
SAMSN1-202ENST00000400564 POTEB2H3BUK9 544 aa13.15□□□□□ -0.3
SAMSN1-202ENST00000400564 NUBP1P53384 320 aa13.13□□□□□ -0.31
SAMSN1-202ENST00000400564 POTEGQ6S5H5 508 aa13.12□□□□□ -0.31
SAMSN1-202ENST00000400564 SPOCK2Q92563 424 aa13.12□□□□□ -0.31
SAMSN1-202ENST00000400564 RASEFQ8IZ41 740 aa13.11□□□□□ -0.31
SAMSN1-202ENST00000400564 METRNQ9UJH8 293 aa13.07□□□□□ -0.32
SAMSN1-202ENST00000400564 SLC39A7Q92504 469 aa13.07□□□□□ -0.32
SAMSN1-202ENST00000400564 PCDH10Q9P2E7 1040 aa13.06□□□□□ -0.32
SAMSN1-202ENST00000400564 MAMSTRQ6ZN01 415 aa13.05□□□□□ -0.32
SAMSN1-202ENST00000400564 PELP1Q8IZL8 1130 aaKnown RBP13.05□□□□□ -0.32
SAMSN1-202ENST00000400564 TSPYL2Q9H2G4 693 aaPredicted RBP13.05□□□□□ -0.32
SAMSN1-202ENST00000400564 ASTLQ6HA08 431 aaPredicted RBP13.04□□□□□ -0.32
SAMSN1-202ENST00000400564 C7P10643 843 aa13.03□□□□□ -0.32
SAMSN1-202ENST00000400564 MS4A3Q96HJ5 214 aa13.03□□□□□ -0.32
SAMSN1-202ENST00000400564 ATMINO43313 823 aaPredicted RBP12.99□□□□□ -0.33
SAMSN1-202ENST00000400564 DCAF8Q5TAQ9 597 aa12.98□□□□□ -0.33
SAMSN1-202ENST00000400564 FAM212AQ96EL1 285 aa12.98□□□□□ -0.33
SAMSN1-202ENST00000400564 CIZ1Q9ULV3 898 aaPredicted RBP12.96□□□□□ -0.33
SAMSN1-202ENST00000400564 SCUBE2Q9NQ36 999 aa12.94□□□□□ -0.34
SAMSN1-202ENST00000400564 CCDC61Q9Y6R9 512 aa12.94□□□□□ -0.34
SAMSN1-202ENST00000400564 GSE1Q14687 1217 aa12.91□□□□□ -0.34
SAMSN1-202ENST00000400564 POTEJP0CG39 1038 aa12.87□□□□□ -0.35
SAMSN1-202ENST00000400564 PYGBP11216 843 aa12.86□□□□□ -0.35
SAMSN1-202ENST00000400564 PKD2Q13563 968 aa12.86□□□□□ -0.35
SAMSN1-202ENST00000400564 ATN1P54259 1190 aaPredicted RBP12.83□□□□□ -0.36
SAMSN1-202ENST00000400564 FAM163AQ96GL9 167 aaPredicted RBP12.82□□□□□ -0.36
SAMSN1-202ENST00000400564 RTN4Q9NQC3 1192 aaKnown RBP12.81□□□□□ -0.36
SAMSN1-202ENST00000400564 KIF12Q96FN5 646 aa12.81□□□□□ -0.36
SAMSN1-202ENST00000400564 MAP3K13O43283 966 aa12.79□□□□□ -0.36
SAMSN1-202ENST00000400564 LCE2DQ5TA82 110 aaPredicted RBP12.78□□□□□ -0.36
SAMSN1-202ENST00000400564 ECM2O94769 699 aaPredicted RBP12.76□□□□□ -0.37
SAMSN1-202ENST00000400564 AMER1Q5JTC6 1135 aaPredicted RBP12.76□□□□□ -0.37
SAMSN1-202ENST00000400564 BMP2KQ9NSY1 1161 aaPredicted RBP12.76□□□□□ -0.37
SAMSN1-202ENST00000400564 TIE1P35590 1138 aa12.74□□□□□ -0.37
SAMSN1-202ENST00000400564 CHRM1P11229 460 aaPredicted RBP12.73□□□□□ -0.37
SAMSN1-202ENST00000400564 TRIM41Q8WV44 630 aa12.72□□□□□ -0.37
SAMSN1-202ENST00000400564 PCDHB13Q9Y5F0 798 aa12.72□□□□□ -0.37
SAMSN1-202ENST00000400564 IFNL1Q8IU54 200 aa12.69□□□□□ -0.38
SAMSN1-202ENST00000400564 RNF25Q96BH1 459 aaPredicted RBP12.69□□□□□ -0.38
SAMSN1-202ENST00000400564 PCDHB8Q9UN66 801 aa12.69□□□□□ -0.38
SAMSN1-202ENST00000400564 SEC24BO95487 1268 aa12.69□□□□□ -0.38
SAMSN1-202ENST00000400564 POTEFA5A3E0 1075 aa12.68□□□□□ -0.38
SAMSN1-202ENST00000400564 RGL2O15211 777 aa12.68□□□□□ -0.38
SAMSN1-202ENST00000400564 TRPC6Q9Y210 931 aa12.67□□□□□ -0.38
SAMSN1-202ENST00000400564 SGIP1Q9BQI5 828 aa12.66□□□□□ -0.38
SAMSN1-202ENST00000400564 TTLL13PA6NNM8 815 aa12.61□□□□□ -0.39
SAMSN1-202ENST00000400564 ZNF467Q7Z7K2 595 aaPredicted RBP12.61□□□□□ -0.39
SAMSN1-202ENST00000400564 IER5LQ5T953 404 aa12.6□□□□□ -0.39
SAMSN1-202ENST00000400564 RIOK3O14730 519 aaKnown RBP12.59□□□□□ -0.39
SAMSN1-202ENST00000400564 CDAN1Q8IWY9 1227 aa12.59□□□□□ -0.39
SAMSN1-202ENST00000400564 COLQQ9Y215 455 aaPredicted RBP12.58□□□□□ -0.4
SAMSN1-202ENST00000400564 TRIM35Q9UPQ4 493 aa12.56□□□□□ -0.4
SAMSN1-202ENST00000400564 PSEN1P49768 467 aa12.53□□□□□ -0.4
SAMSN1-202ENST00000400564 VGFO15240 615 aaPredicted RBP12.51□□□□□ -0.41
SAMSN1-202ENST00000400564 PDAP1Q13442 181 aaKnown RBP12.51□□□□□ -0.41
SAMSN1-202ENST00000400564 SLAIN1Q8ND83 568 aa12.51□□□□□ -0.41
SAMSN1-202ENST00000400564 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.5□□□□□ -0.41
SAMSN1-202ENST00000400564 DCAF8L2P0C7V8 631 aa12.5□□□□□ -0.41
SAMSN1-202ENST00000400564 ZFP91Q96JP5 570 aaPredicted RBP12.5□□□□□ -0.41
SAMSN1-202ENST00000400564 TMEM106CQ9BVX2 250 aa12.5□□□□□ -0.41
SAMSN1-202ENST00000400564 PLCG2P16885 1265 aa12.46□□□□□ -0.41
SAMSN1-202ENST00000400564 ST18O60284 1047 aa12.44□□□□□ -0.42
SAMSN1-202ENST00000400564 STK25O00506 426 aa12.42□□□□□ -0.42
SAMSN1-202ENST00000400564 BCL11BQ9C0K0 894 aaPredicted RBP12.42□□□□□ -0.42
SAMSN1-202ENST00000400564 TAOK2Q9UL54 1235 aa12.42□□□□□ -0.42
SAMSN1-202ENST00000400564 CHGAP10645 457 aaKnown RBP12.4□□□□□ -0.42
SAMSN1-202ENST00000400564 STK24Q9Y6E0 443 aa12.4□□□□□ -0.42
SAMSN1-202ENST00000400564 CABP2Q9NPB3 220 aa12.39□□□□□ -0.43
SAMSN1-202ENST00000400564 TMEM121BQ9BXQ6 578 aaPredicted RBP12.37□□□□□ -0.43
SAMSN1-202ENST00000400564 HS6ST3Q8IZP7 471 aa12.35□□□□□ -0.43
SAMSN1-202ENST00000400564 SNPHO15079 494 aa12.34□□□□□ -0.43
SAMSN1-202ENST00000400564 EFCAB3Q8N7B9 438 aa12.32□□□□□ -0.44
SAMSN1-202ENST00000400564 IRX5P78411 483 aaPredicted RBP12.31□□□□□ -0.44
SAMSN1-202ENST00000400564 GOLGA2Q08379 1002 aa12.31□□□□□ -0.44
SAMSN1-202ENST00000400564 MMRN1Q13201 1228 aa12.3□□□□□ -0.44
SAMSN1-202ENST00000400564 OCEL1Q9H607 264 aa12.29□□□□□ -0.44
SAMSN1-202ENST00000400564 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.29□□□□□ -0.44
SAMSN1-202ENST00000400564 MKRN3Q13064 507 aaKnown RBP12.28□□□□□ -0.44
SAMSN1-202ENST00000400564 SPNS2Q8IVW8 549 aa12.28□□□□□ -0.44
SAMSN1-202ENST00000400564 NKX1-1Q15270 411 aaPredicted RBP12.23□□□□□ -0.45
SAMSN1-202ENST00000400564 PHF8Q9UPP1 1060 aa12.22□□□□□ -0.45
SAMSN1-202ENST00000400564 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.21□□□□□ -0.45
SAMSN1-202ENST00000400564 MFRPQ9BY79 579 aa12.2□□□□□ -0.46
SAMSN1-202ENST00000400564 DNAJC5Q9H3Z4 198 aa12.19□□□□□ -0.46
SAMSN1-202ENST00000400564 SOX12O15370 315 aa12.18□□□□□ -0.46
SAMSN1-202ENST00000400564 MARVELD3Q96A59 401 aa12.18□□□□□ -0.46
SAMSN1-202ENST00000400564 C3orf67Q6ZVT6 689 aa12.17□□□□□ -0.46
SAMSN1-202ENST00000400564 ILDR1Q86SU0 546 aaPredicted RBP12.17□□□□□ -0.46
SAMSN1-202ENST00000400564 PDCD7Q8N8D1 485 aaKnown RBP12.17□□□□□ -0.46
SAMSN1-202ENST00000400564 FBXO22Q8NEZ5 403 aa12.16□□□□□ -0.46
SAMSN1-202ENST00000400564 MS4A4AQ96JQ5 239 aa12.16□□□□□ -0.46
SAMSN1-202ENST00000400564 DPY19L2Q6NUT2 758 aa12.15□□□□□ -0.46
SAMSN1-202ENST00000400564 BBXQ8WY36 941 aaPredicted RBP12.15□□□□□ -0.46
SAMSN1-202ENST00000400564 EMP3P54852 163 aa12.14□□□□□ -0.47
SAMSN1-202ENST00000400564 NLRP6P59044 892 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms