RNA–Protein interactions for RNA: ENST00000400050.7

MTCL1-203, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene MTCL1, Length 6,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-203ENST00000400050 STAG3Q9UJ98 1225 aa21.03■□□□□ 0.96
MTCL1-203ENST00000400050 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.01■□□□□ 0.95
MTCL1-203ENST00000400050 ANP32BQ92688 251 aaKnown RBP20.98■□□□□ 0.95
MTCL1-203ENST00000400050 RRP7BPQ9NSQ0 103 aa20.98■□□□□ 0.95
MTCL1-203ENST00000400050 KDM2AQ9Y2K7 1162 aa20.95■□□□□ 0.95
MTCL1-203ENST00000400050 PLEKHD1A6NEE1 506 aa20.95■□□□□ 0.94
MTCL1-203ENST00000400050 HSP90AA1P07900 732 aaKnown RBP20.94■□□□□ 0.94
MTCL1-203ENST00000400050 BCL11AQ9H165 835 aa20.93■□□□□ 0.94
MTCL1-203ENST00000400050 FHAD1B1AJZ9 1412 aa20.93■□□□□ 0.94
MTCL1-203ENST00000400050 TIMELESSQ9UNS1 1208 aa20.9■□□□□ 0.94
MTCL1-203ENST00000400050 SALL2Q9Y467 1007 aaPredicted RBP20.9■□□□□ 0.94
MTCL1-203ENST00000400050 CECR2Q9BXF3 1484 aa20.89■□□□□ 0.93
MTCL1-203ENST00000400050 CDCA8Q53HL2 280 aa20.86■□□□□ 0.93
MTCL1-203ENST00000400050 CCNB3Q8WWL7 1395 aa20.85■□□□□ 0.93
MTCL1-203ENST00000400050 HIRIP3Q9BW71 556 aaPredicted RBP20.84■□□□□ 0.93
MTCL1-203ENST00000400050 CFDP1Q9UEE9 299 aaPredicted RBP20.83■□□□□ 0.93
MTCL1-203ENST00000400050 DDRGK1Q96HY6 314 aa20.8■□□□□ 0.92
MTCL1-203ENST00000400050 VPS8Q8N3P4 1428 aa20.79■□□□□ 0.92
MTCL1-203ENST00000400050 SOGA1O94964 1423 aa20.77■□□□□ 0.91
MTCL1-203ENST00000400050 CARMIL1Q5VZK9 1371 aa20.76■□□□□ 0.91
MTCL1-203ENST00000400050 IRX6P78412 446 aaPredicted RBP20.73■□□□□ 0.91
MTCL1-203ENST00000400050 MYH16Q9H6N6 1097 aa20.73■□□□□ 0.91
MTCL1-203ENST00000400050 CARD11Q9BXL7 1154 aa20.72■□□□□ 0.91
MTCL1-203ENST00000400050 MROH2BQ7Z745 1585 aa20.71■□□□□ 0.91
MTCL1-203ENST00000400050 CCDC88BA6NC98 1476 aa20.71■□□□□ 0.91
MTCL1-203ENST00000400050 CFAP53Q96M91 514 aa20.7■□□□□ 0.9
MTCL1-203ENST00000400050 CUX2O14529 1486 aa20.7■□□□□ 0.9
MTCL1-203ENST00000400050 KNSTRNQ9Y448 316 aa20.7■□□□□ 0.9
MTCL1-203ENST00000400050 BECN1Q14457 450 aa20.69■□□□□ 0.9
MTCL1-203ENST00000400050 NBR1Q14596 966 aa20.68■□□□□ 0.9
MTCL1-203ENST00000400050 SMARCA2P51531 1590 aa20.67■□□□□ 0.9
MTCL1-203ENST00000400050 SETD5Q9C0A6 1442 aa20.66■□□□□ 0.9
MTCL1-203ENST00000400050 SIN3AQ96ST3 1273 aa20.66■□□□□ 0.9
MTCL1-203ENST00000400050 CCER2I3L3R5 266 aa20.66■□□□□ 0.9
MTCL1-203ENST00000400050 PPP4R2Q9NY27 417 aa20.66■□□□□ 0.9
MTCL1-203ENST00000400050 ANP32EQ9BTT0 268 aa20.65■□□□□ 0.9
MTCL1-203ENST00000400050 KCNH8Q96L42 1107 aa20.65■□□□□ 0.9
MTCL1-203ENST00000400050 EIF5BO60841 1220 aaKnown RBP20.64■□□□□ 0.89
MTCL1-203ENST00000400050 RGL3Q3MIN7 710 aa20.63■□□□□ 0.89
MTCL1-203ENST00000400050 SUPT16HQ9Y5B9 1047 aaKnown RBP20.63■□□□□ 0.89
MTCL1-203ENST00000400050 ARHGAP35Q9NRY4 1499 aa20.62■□□□□ 0.89
MTCL1-203ENST00000400050 TOP2AP11388 1531 aaKnown RBP20.6■□□□□ 0.89
MTCL1-203ENST00000400050 PPP1R15AO75807 674 aaPredicted RBP20.56■□□□□ 0.88
MTCL1-203ENST00000400050 GLIPR1L2Q4G1C9 344 aa20.55■□□□□ 0.88
MTCL1-203ENST00000400050 ABCC8Q09428 1581 aa20.55■□□□□ 0.88
MTCL1-203ENST00000400050 PPM1GO15355 546 aaPredicted RBP20.54■□□□□ 0.88
MTCL1-203ENST00000400050 FMN1Q68DA7 1419 aa20.52■□□□□ 0.88
MTCL1-203ENST00000400050 EIF4G1Q04637 1599 aaKnown RBP20.5■□□□□ 0.87
MTCL1-203ENST00000400050 NUDCQ9Y266 331 aa20.5■□□□□ 0.87
MTCL1-203ENST00000400050 ERCC6Q03468 1493 aa20.49■□□□□ 0.87
MTCL1-203ENST00000400050 GOLGA6L22H0YM25 854 aa20.48■□□□□ 0.87
MTCL1-203ENST00000400050 TMF1P82094 1093 aa20.48■□□□□ 0.87
MTCL1-203ENST00000400050 CHMP4BQ9H444 224 aaKnown RBP20.48■□□□□ 0.87
MTCL1-203ENST00000400050 MS4A1P11836 297 aa20.48■□□□□ 0.87
MTCL1-203ENST00000400050 ERICH6BQ5W0A0 696 aa20.47■□□□□ 0.87
MTCL1-203ENST00000400050 KANK1Q14678 1352 aa20.45■□□□□ 0.86
MTCL1-203ENST00000400050 MAPK8IP3Q9UPT6 1336 aa20.44■□□□□ 0.86
MTCL1-203ENST00000400050 FTSJ3Q8IY81 847 aaKnown RBP20.44■□□□□ 0.86
MTCL1-203ENST00000400050 KANK4Q5T7N3 995 aaPredicted RBP20.43■□□□□ 0.86
MTCL1-203ENST00000400050 PLPPR3Q6T4P5 718 aa20.43■□□□□ 0.86
MTCL1-203ENST00000400050 NCLP19338 710 aaKnown RBP20.42■□□□□ 0.86
MTCL1-203ENST00000400050 RAB3GAP2Q9H2M9 1393 aa20.42■□□□□ 0.86
MTCL1-203ENST00000400050 PNNQ9H307 717 aaKnown RBP20.42■□□□□ 0.86
MTCL1-203ENST00000400050 CASC1Q6TDU7 716 aa20.41■□□□□ 0.86
MTCL1-203ENST00000400050 PDS5BQ9NTI5 1447 aa20.41■□□□□ 0.86
MTCL1-203ENST00000400050 HSPA5P11021 654 aaKnown RBP20.4■□□□□ 0.86
MTCL1-203ENST00000400050 DCAF11Q8TEB1 546 aa20.39■□□□□ 0.86
MTCL1-203ENST00000400050 CARMIL2Q6F5E8 1435 aa20.39■□□□□ 0.86
MTCL1-203ENST00000400050 WIZO95785 1651 aa20.38■□□□□ 0.85
MTCL1-203ENST00000400050 NOP58Q9Y2X3 529 aaKnown RBP20.36■□□□□ 0.85
MTCL1-203ENST00000400050 RAPGEF2Q9Y4G8 1499 aa20.35■□□□□ 0.85
MTCL1-203ENST00000400050 TRIM44Q96DX7 344 aaPredicted RBP20.35■□□□□ 0.85
MTCL1-203ENST00000400050 POGKQ9P215 609 aa20.34■□□□□ 0.85
MTCL1-203ENST00000400050 CC2D1BQ5T0F9 858 aaKnown RBP20.33■□□□□ 0.85
MTCL1-203ENST00000400050 ARXQ96QS3 562 aa20.33■□□□□ 0.84
MTCL1-203ENST00000400050 KTN1Q86UP2 1357 aaKnown RBP20.32■□□□□ 0.84
MTCL1-203ENST00000400050 PKD2Q13563 968 aa20.3■□□□□ 0.84
MTCL1-203ENST00000400050 ANKRD30AQ9BXX3 1397 aa20.3■□□□□ 0.84
MTCL1-203ENST00000400050 RALBP1Q15311 655 aa20.3■□□□□ 0.84
MTCL1-203ENST00000400050 MPHOSPH9Q99550 1183 aa20.29■□□□□ 0.84
MTCL1-203ENST00000400050 NEUROD2Q15784 382 aa20.28■□□□□ 0.84
MTCL1-203ENST00000400050 C14orf37Q86TY3 774 aa20.28■□□□□ 0.84
MTCL1-203ENST00000400050 B4GALNT3Q6L9W6 998 aa20.27■□□□□ 0.83
MTCL1-203ENST00000400050 CADPSQ9ULU8 1353 aa20.26■□□□□ 0.83
MTCL1-203ENST00000400050 FRAT1Q92837 279 aaPredicted RBP20.25■□□□□ 0.83
MTCL1-203ENST00000400050 RGS3P49796 1198 aa20.24■□□□□ 0.83
MTCL1-203ENST00000400050 SMARCA4P51532 1647 aa20.24■□□□□ 0.83
MTCL1-203ENST00000400050 HDGFP51858 240 aaKnown RBP20.22■□□□□ 0.83
MTCL1-203ENST00000400050 CFAP44Q96MT7 982 aa20.22■□□□□ 0.83
MTCL1-203ENST00000400050 SENP3-EIF4A1A0A087X0R7 540 aa20.22■□□□□ 0.83
MTCL1-203ENST00000400050 ATAD2BQ9ULI0 1458 aa20.22■□□□□ 0.83
MTCL1-203ENST00000400050 HAP1P54257 671 aaPredicted RBP20.21■□□□□ 0.83
MTCL1-203ENST00000400050 ROCK2O75116 1388 aaKnown RBP20.2■□□□□ 0.82
MTCL1-203ENST00000400050 ZBTB7CA1YPR0 619 aa20.2■□□□□ 0.82
MTCL1-203ENST00000400050 RSPH4AQ5TD94 716 aa20.2■□□□□ 0.82
MTCL1-203ENST00000400050 ARID4BQ4LE39 1312 aaPredicted RBP20.2■□□□□ 0.82
MTCL1-203ENST00000400050 CCDC18Q5T9S5 1454 aa20.2■□□□□ 0.82
MTCL1-203ENST00000400050 MORC1Q86VD1 984 aa20.2■□□□□ 0.82
MTCL1-203ENST00000400050 NUP155O75694 1391 aa20.2■□□□□ 0.82
MTCL1-203ENST00000400050 LAS1LQ9Y4W2 734 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms