RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 HSP90AA1P07900 732 aaKnown RBP18.7■□□□□ 0.58
CACNA1C-211ENST00000399617 MTUS2Q5JR59 1369 aa18.69■□□□□ 0.58
CACNA1C-211ENST00000399617 WDR43Q15061 677 aaKnown RBP eCLIP18.68■□□□□ 0.58
CACNA1C-211ENST00000399617 PLEKHD1A6NEE1 506 aa18.67■□□□□ 0.58
CACNA1C-211ENST00000399617 HNRNPUQ00839 825 aaKnown RBP eCLIP18.66■□□□□ 0.58
CACNA1C-211ENST00000399617 TNNT2P45379 298 aaPredicted RBP18.62■□□□□ 0.57
CACNA1C-211ENST00000399617 LAS1LQ9Y4W2 734 aaKnown RBP18.6■□□□□ 0.57
CACNA1C-211ENST00000399617 IRX6P78412 446 aaPredicted RBP18.59■□□□□ 0.57
CACNA1C-211ENST00000399617 TPRNQ4KMQ1 711 aa18.59■□□□□ 0.57
CACNA1C-211ENST00000399617 SAFB2Q14151 953 aaKnown RBP eCLIP18.56■□□□□ 0.56
CACNA1C-211ENST00000399617 FKBP8Q14318 412 aa18.54■□□□□ 0.56
CACNA1C-211ENST00000399617 NEUROD2Q15784 382 aa18.54■□□□□ 0.56
CACNA1C-211ENST00000399617 POGKQ9P215 609 aa18.53■□□□□ 0.56
CACNA1C-211ENST00000399617 CFDP1Q9UEE9 299 aaPredicted RBP18.49■□□□□ 0.55
CACNA1C-211ENST00000399617 MRS2Q9HD23 443 aa18.46■□□□□ 0.55
CACNA1C-211ENST00000399617 ANP32AP39687 249 aaKnown RBP18.46■□□□□ 0.55
CACNA1C-211ENST00000399617 CCDC9Q9Y3X0 531 aaKnown RBP18.45■□□□□ 0.54
CACNA1C-211ENST00000399617 GGT6Q6P531 493 aa18.42■□□□□ 0.54
CACNA1C-211ENST00000399617 STK26Q9P289 416 aa18.41■□□□□ 0.54
CACNA1C-211ENST00000399617 EIF4G1Q04637 1599 aaKnown RBP18.41■□□□□ 0.54
CACNA1C-211ENST00000399617 NCBP3Q53F19 620 aaKnown RBP18.4■□□□□ 0.54
CACNA1C-211ENST00000399617 MYH16Q9H6N6 1097 aa18.4■□□□□ 0.54
CACNA1C-211ENST00000399617 AEBP2Q6ZN18 517 aaPredicted RBP18.39■□□□□ 0.54
CACNA1C-211ENST00000399617 UPF2Q9HAU5 1272 aaKnown RBP18.38■□□□□ 0.53
CACNA1C-211ENST00000399617 PAK3O75914 559 aaPredicted RBP18.38■□□□□ 0.53
CACNA1C-211ENST00000399617 ZCCHC6Q5VYS8 1495 aaKnown RBP18.37■□□□□ 0.53
CACNA1C-211ENST00000399617 ZNF330Q9Y3S2 320 aaPredicted RBP18.36■□□□□ 0.53
CACNA1C-211ENST00000399617 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.35■□□□□ 0.53
CACNA1C-211ENST00000399617 NUTM2DQ5VT03 806 aaPredicted RBP18.34■□□□□ 0.53
CACNA1C-211ENST00000399617 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.33■□□□□ 0.53
CACNA1C-211ENST00000399617 RB1CC1Q8TDY2 1594 aa18.33■□□□□ 0.52
CACNA1C-211ENST00000399617 CC2D1BQ5T0F9 858 aaKnown RBP18.32■□□□□ 0.52
CACNA1C-211ENST00000399617 U2SURPO15042 1029 aaKnown RBP18.32■□□□□ 0.52
CACNA1C-211ENST00000399617 CCDC136Q96JN2 1154 aa18.32■□□□□ 0.52
CACNA1C-211ENST00000399617 BAZ1BQ9UIG0 1483 aaKnown RBP18.3■□□□□ 0.52
CACNA1C-211ENST00000399617 CARD11Q9BXL7 1154 aa18.29■□□□□ 0.52
CACNA1C-211ENST00000399617 CDK11BP21127 795 aaKnown RBP18.28■□□□□ 0.52
CACNA1C-211ENST00000399617 AMER1Q5JTC6 1135 aaPredicted RBP18.27■□□□□ 0.52
CACNA1C-211ENST00000399617 CLIP1P30622 1438 aa18.26■□□□□ 0.51
CACNA1C-211ENST00000399617 ISY1Q9ULR0 285 aaKnown RBP18.26■□□□□ 0.51
CACNA1C-211ENST00000399617 SRPK2P78362 688 aaKnown RBP18.26■□□□□ 0.51
CACNA1C-211ENST00000399617 NBR1Q14596 966 aa18.25■□□□□ 0.51
CACNA1C-211ENST00000399617 KNSTRNQ9Y448 316 aa18.25■□□□□ 0.51
CACNA1C-211ENST00000399617 CSB-PGBD3P0DP91 1061 aa18.25■□□□□ 0.51
CACNA1C-211ENST00000399617 EIF4G2P78344 907 aaKnown RBP eCLIP18.25■□□□□ 0.51
CACNA1C-211ENST00000399617 NUTM2FA1L443 756 aa18.25■□□□□ 0.51
CACNA1C-211ENST00000399617 ANP32BQ92688 251 aaKnown RBP18.24■□□□□ 0.51
CACNA1C-211ENST00000399617 CFAP53Q96M91 514 aa18.24■□□□□ 0.51
CACNA1C-211ENST00000399617 GOLGA2Q08379 1002 aa18.22■□□□□ 0.51
CACNA1C-211ENST00000399617 NAP1L2Q9ULW6 460 aaPredicted RBP18.21■□□□□ 0.51
CACNA1C-211ENST00000399617 OS9Q13438 667 aaPredicted RBP18.21■□□□□ 0.51
CACNA1C-211ENST00000399617 MAPK8IP3Q9UPT6 1336 aa18.2■□□□□ 0.5
CACNA1C-211ENST00000399617 SIN3AQ96ST3 1273 aa18.18■□□□□ 0.5
CACNA1C-211ENST00000399617 FRAT1Q92837 279 aaPredicted RBP18.18■□□□□ 0.5
CACNA1C-211ENST00000399617 RSF1Q96T23 1441 aaPredicted RBP18.16■□□□□ 0.5
CACNA1C-211ENST00000399617 CYB5RLQ6IPT4 315 aa18.16■□□□□ 0.5
CACNA1C-211ENST00000399617 DCAF11Q8TEB1 546 aa18.15■□□□□ 0.5
CACNA1C-211ENST00000399617 FOXD1Q16676 465 aa18.15■□□□□ 0.5
CACNA1C-211ENST00000399617 FTSJ3Q8IY81 847 aaKnown RBP18.15■□□□□ 0.5
CACNA1C-211ENST00000399617 CLSTN1O94985 981 aa18.14■□□□□ 0.49
CACNA1C-211ENST00000399617 NCLP19338 710 aaKnown RBP18.11■□□□□ 0.49
CACNA1C-211ENST00000399617 EIF5BO60841 1220 aaKnown RBP18.1■□□□□ 0.49
CACNA1C-211ENST00000399617 ACIN1Q9UKV3 1341 aaKnown RBP18.09■□□□□ 0.49
CACNA1C-211ENST00000399617 CCNB3Q8WWL7 1395 aa18.09■□□□□ 0.49
CACNA1C-211ENST00000399617 CECR2Q9BXF3 1484 aa18.09■□□□□ 0.49
CACNA1C-211ENST00000399617 PHF23Q9BUL5 403 aaPredicted RBP18.09■□□□□ 0.49
CACNA1C-211ENST00000399617 MIER1Q8N108 512 aa18.07■□□□□ 0.48
CACNA1C-211ENST00000399617 WRNQ14191 1432 aaPredicted RBP eCLIP18.07■□□□□ 0.48
CACNA1C-211ENST00000399617 APBB1O00213 710 aa18.06■□□□□ 0.48
CACNA1C-211ENST00000399617 NUDCQ9Y266 331 aa18.06■□□□□ 0.48
CACNA1C-211ENST00000399617 LTV1Q96GA3 475 aaPredicted RBP18.06■□□□□ 0.48
CACNA1C-211ENST00000399617 MSH5O43196 834 aa18.05■□□□□ 0.48
CACNA1C-211ENST00000399617 KANK1Q14678 1352 aa18.05■□□□□ 0.48
CACNA1C-211ENST00000399617 HDGFP51858 240 aaKnown RBP18.05■□□□□ 0.48
CACNA1C-211ENST00000399617 KLHL34Q8N239 644 aa18.04■□□□□ 0.48
CACNA1C-211ENST00000399617 KIF27Q86VH2 1401 aa18.04■□□□□ 0.48
CACNA1C-211ENST00000399617 FGD1P98174 961 aa18.01■□□□□ 0.47
CACNA1C-211ENST00000399617 CDCA8Q53HL2 280 aa18■□□□□ 0.47
CACNA1C-211ENST00000399617 TDRD9Q8NDG6 1382 aaKnown RBP18■□□□□ 0.47
CACNA1C-211ENST00000399617 MEX3CQ5U5Q3 659 aaKnown RBP17.99■□□□□ 0.47
CACNA1C-211ENST00000399617 CUX2O14529 1486 aa17.99■□□□□ 0.47
CACNA1C-211ENST00000399617 KCNJ4P48050 445 aa17.98■□□□□ 0.47
CACNA1C-211ENST00000399617 RGS3P49796 1198 aa17.98■□□□□ 0.47
CACNA1C-211ENST00000399617 CEP162Q5TB80 1403 aa17.97■□□□□ 0.47
CACNA1C-211ENST00000399617 HNRNPMP52272 730 aaKnown RBP eCLIP17.96■□□□□ 0.47
CACNA1C-211ENST00000399617 MORC1Q86VD1 984 aa17.96■□□□□ 0.47
CACNA1C-211ENST00000399617 RTF1Q92541 710 aaKnown RBP17.96■□□□□ 0.47
CACNA1C-211ENST00000399617 GOLGA3Q08378 1498 aa17.96■□□□□ 0.47
CACNA1C-211ENST00000399617 KIF3BO15066 747 aa17.96■□□□□ 0.46
CACNA1C-211ENST00000399617 CHMP3Q9Y3E7 222 aa17.95■□□□□ 0.46
CACNA1C-211ENST00000399617 G3V3G9 751 aa17.93■□□□□ 0.46
CACNA1C-211ENST00000399617 DCAF8Q5TAQ9 597 aa17.93■□□□□ 0.46
CACNA1C-211ENST00000399617 CASC1Q6TDU7 716 aa17.93■□□□□ 0.46
CACNA1C-211ENST00000399617 GLIPR1L2Q4G1C9 344 aa17.93■□□□□ 0.46
CACNA1C-211ENST00000399617 ZRSR1Q15695 479 aaKnown RBP17.91■□□□□ 0.46
CACNA1C-211ENST00000399617 CARMIL1Q5VZK9 1371 aa17.91■□□□□ 0.46
CACNA1C-211ENST00000399617 NGDNQ8NEJ9 315 aaKnown RBP17.9■□□□□ 0.46
CACNA1C-211ENST00000399617 PLCB2Q00722 1185 aa17.9■□□□□ 0.46
CACNA1C-211ENST00000399617 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.9■□□□□ 0.46
CACNA1C-211ENST00000399617 TMX4Q9H1E5 349 aaPredicted RBP17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms