RNA–Protein interactions for RNA: ENST00000398645.6

KDM2A-202, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-202ENST00000398645 TRIM44Q96DX7 344 aaPredicted RBP26.09■■□□□ 1.77
KDM2A-202ENST00000398645 ESF1Q9H501 851 aaKnown RBP26.04■■□□□ 1.76
KDM2A-202ENST00000398645 NAP1L5Q96NT1 182 aaPredicted RBP26.03■■□□□ 1.76
KDM2A-202ENST00000398645 DNTTIP2Q5QJE6 756 aaKnown RBP26.01■■□□□ 1.75
KDM2A-202ENST00000398645 ARID4BQ4LE39 1312 aaPredicted RBP26■■□□□ 1.75
KDM2A-202ENST00000398645 PTMAP06454 111 aaKnown RBP25.98■■□□□ 1.75
KDM2A-202ENST00000398645 C14orf37Q86TY3 774 aa25.94■■□□□ 1.74
KDM2A-202ENST00000398645 PLCB2Q00722 1185 aa25.92■■□□□ 1.74
KDM2A-202ENST00000398645 MYH16Q9H6N6 1097 aa25.92■■□□□ 1.74
KDM2A-202ENST00000398645 ABCC9O60706 1549 aa25.88■■□□□ 1.73
KDM2A-202ENST00000398645 ARID3AQ99856 593 aa25.84■■□□□ 1.73
KDM2A-202ENST00000398645 NCBP3Q53F19 620 aaKnown RBP25.82■■□□□ 1.72
KDM2A-202ENST00000398645 ANP32EQ9BTT0 268 aa25.8■■□□□ 1.72
KDM2A-202ENST00000398645 SUPT16HQ9Y5B9 1047 aaKnown RBP25.8■■□□□ 1.72
KDM2A-202ENST00000398645 BECN1Q14457 450 aa25.8■■□□□ 1.72
KDM2A-202ENST00000398645 SPRYD3Q8NCJ5 442 aa25.79■■□□□ 1.72
KDM2A-202ENST00000398645 CSRNP3Q8WYN3 585 aa25.78■■□□□ 1.72
KDM2A-202ENST00000398645 DDRGK1Q96HY6 314 aa25.77■■□□□ 1.72
KDM2A-202ENST00000398645 TNNT2P45379 298 aaPredicted RBP25.77■■□□□ 1.72
KDM2A-202ENST00000398645 PPM1GO15355 546 aaPredicted RBP25.75■■□□□ 1.71
KDM2A-202ENST00000398645 NEUROD2Q15784 382 aa25.74■■□□□ 1.71
KDM2A-202ENST00000398645 RGS3P49796 1198 aa25.72■■□□□ 1.71
KDM2A-202ENST00000398645 GOLGA6L22H0YM25 854 aa25.68■■□□□ 1.7
KDM2A-202ENST00000398645 ZRSR1Q15695 479 aaKnown RBP25.67■■□□□ 1.7
KDM2A-202ENST00000398645 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.65■■□□□ 1.7
KDM2A-202ENST00000398645 RRP7BPQ9NSQ0 103 aa25.65■■□□□ 1.7
KDM2A-202ENST00000398645 RGL3Q3MIN7 710 aa25.62■■□□□ 1.69
KDM2A-202ENST00000398645 NAP1L2Q9ULW6 460 aaPredicted RBP25.61■■□□□ 1.69
KDM2A-202ENST00000398645 FRAT1Q92837 279 aaPredicted RBP25.57■■□□□ 1.68
KDM2A-202ENST00000398645 FTSJ3Q8IY81 847 aaKnown RBP25.56■■□□□ 1.68
KDM2A-202ENST00000398645 B4GALNT3Q6L9W6 998 aa25.54■■□□□ 1.68
KDM2A-202ENST00000398645 NOP58Q9Y2X3 529 aaKnown RBP25.53■■□□□ 1.68
KDM2A-202ENST00000398645 HSP90AB1P08238 724 aaKnown RBP25.51■■□□□ 1.67
KDM2A-202ENST00000398645 ERICH6BQ5W0A0 696 aa25.48■■□□□ 1.67
KDM2A-202ENST00000398645 CASC1Q6TDU7 716 aa25.47■■□□□ 1.67
KDM2A-202ENST00000398645 DEKP35659 375 aaKnown RBP25.45■■□□□ 1.66
KDM2A-202ENST00000398645 EIF4G2P78344 907 aaKnown RBP eCLIP25.45■■□□□ 1.66
KDM2A-202ENST00000398645 CC2D1BQ5T0F9 858 aaKnown RBP25.44■■□□□ 1.66
KDM2A-202ENST00000398645 CLSTN1O94985 981 aa25.44■■□□□ 1.66
KDM2A-202ENST00000398645 PPP1R15AO75807 674 aaPredicted RBP25.4■■□□□ 1.66
KDM2A-202ENST00000398645 HAP1P54257 671 aaPredicted RBP25.4■■□□□ 1.66
KDM2A-202ENST00000398645 KCNH8Q96L42 1107 aa25.37■■□□□ 1.65
KDM2A-202ENST00000398645 LMOD2Q6P5Q4 547 aa25.36■■□□□ 1.65
KDM2A-202ENST00000398645 NPM1P06748 294 aaKnown RBP eCLIP25.35■■□□□ 1.65
KDM2A-202ENST00000398645 OS9Q13438 667 aaPredicted RBP25.35■■□□□ 1.65
KDM2A-202ENST00000398645 DRC7Q8IY82 874 aa25.35■■□□□ 1.65
KDM2A-202ENST00000398645 GZF1Q9H116 711 aaPredicted RBP25.34■■□□□ 1.65
KDM2A-202ENST00000398645 FGD1P98174 961 aa25.34■■□□□ 1.65
KDM2A-202ENST00000398645 NPHP1O15259 732 aa25.3■■□□□ 1.64
KDM2A-202ENST00000398645 SOX12O15370 315 aa25.3■■□□□ 1.64
KDM2A-202ENST00000398645 TSPY4P0CV99 314 aa25.29■■□□□ 1.64
KDM2A-202ENST00000398645 TSPY10P0CW01 314 aa25.29■■□□□ 1.64
KDM2A-202ENST00000398645 KCNJ4P48050 445 aa25.29■■□□□ 1.64
KDM2A-202ENST00000398645 APBB1O00213 710 aa25.29■■□□□ 1.64
KDM2A-202ENST00000398645 ANO8Q9HCE9 1232 aaPredicted RBP25.28■■□□□ 1.64
KDM2A-202ENST00000398645 PDE4CQ08493 712 aa25.27■■□□□ 1.64
KDM2A-202ENST00000398645 KNSTRNQ9Y448 316 aa25.26■■□□□ 1.63
KDM2A-202ENST00000398645 MSNP26038 577 aaKnown RBP25.26■■□□□ 1.63
KDM2A-202ENST00000398645 MTUS2Q5JR59 1369 aa25.25■■□□□ 1.63
KDM2A-202ENST00000398645 DCAF1Q9Y4B6 1507 aa25.24■■□□□ 1.63
KDM2A-202ENST00000398645 U2SURPO15042 1029 aaKnown RBP25.23■■□□□ 1.63
KDM2A-202ENST00000398645 SIN3AQ96ST3 1273 aa25.23■■□□□ 1.63
KDM2A-202ENST00000398645 GOLGA6L6A8MZA4 724 aa25.21■■□□□ 1.63
KDM2A-202ENST00000398645 PPP4R2Q9NY27 417 aa25.21■■□□□ 1.63
KDM2A-202ENST00000398645 CFAP53Q96M91 514 aa25.19■■□□□ 1.62
KDM2A-202ENST00000398645 ISY1Q9ULR0 285 aaKnown RBP25.19■■□□□ 1.62
KDM2A-202ENST00000398645 MAPK8IP3Q9UPT6 1336 aa25.19■■□□□ 1.62
KDM2A-202ENST00000398645 CARD11Q9BXL7 1154 aa25.18■■□□□ 1.62
KDM2A-202ENST00000398645 SCRIBQ14160 1630 aa25.17■■□□□ 1.62
KDM2A-202ENST00000398645 HSCBQ8IWL3 235 aa25.17■■□□□ 1.62
KDM2A-202ENST00000398645 GOLGA6L4A6NEF3 574 aa25.15■■□□□ 1.62
KDM2A-202ENST00000398645 CHAF1AQ13111 956 aaPredicted RBP25.14■■□□□ 1.62
KDM2A-202ENST00000398645 MYO15BQ96JP2 1530 aa25.11■■□□□ 1.61
KDM2A-202ENST00000398645 FOXD4L1Q9NU39 408 aa25.1■■□□□ 1.61
KDM2A-202ENST00000398645 SLKQ9H2G2 1235 aaPredicted RBP25.1■■□□□ 1.61
KDM2A-202ENST00000398645 RBM19Q9Y4C8 960 aaKnown RBP25.09■■□□□ 1.61
KDM2A-202ENST00000398645 GOLGA2Q08379 1002 aa25.08■■□□□ 1.61
KDM2A-202ENST00000398645 SAFB2Q14151 953 aaKnown RBP eCLIP25.06■■□□□ 1.6
KDM2A-202ENST00000398645 NOL8Q76FK4 1167 aaKnown RBP25■■□□□ 1.59
KDM2A-202ENST00000398645 POGKQ9P215 609 aa24.99■■□□□ 1.59
KDM2A-202ENST00000398645 GNL2Q13823 731 aaKnown RBP24.98■■□□□ 1.59
KDM2A-202ENST00000398645 FOXD4L5Q5VV16 416 aaPredicted RBP24.97■■□□□ 1.59
KDM2A-202ENST00000398645 CHMP7Q8WUX9 453 aaPredicted RBP24.97■■□□□ 1.59
KDM2A-202ENST00000398645 FOXD4L4Q8WXT5 416 aaPredicted RBP24.97■■□□□ 1.59
KDM2A-202ENST00000398645 NOC3LQ8WTT2 800 aaKnown RBP24.96■■□□□ 1.59
KDM2A-202ENST00000398645 L1TD1Q5T7N2 865 aaKnown RBP24.96■■□□□ 1.59
KDM2A-202ENST00000398645 ZCCHC6Q5VYS8 1495 aaKnown RBP24.95■■□□□ 1.58
KDM2A-202ENST00000398645 CREBRFQ8IUR6 639 aa24.94■■□□□ 1.58
KDM2A-202ENST00000398645 CLIP1P30622 1438 aa24.93■■□□□ 1.58
KDM2A-202ENST00000398645 NRDCO43847 1150 aa24.93■■□□□ 1.58
KDM2A-202ENST00000398645 HSP90B1P14625 803 aaKnown RBP24.92■■□□□ 1.58
KDM2A-202ENST00000398645 PRM3Q9NNZ6 103 aa24.92■■□□□ 1.58
KDM2A-202ENST00000398645 PNNQ9H307 717 aaKnown RBP24.91■■□□□ 1.58
KDM2A-202ENST00000398645 ZNF330Q9Y3S2 320 aaPredicted RBP24.9■■□□□ 1.58
KDM2A-202ENST00000398645 NUDCQ9Y266 331 aa24.89■■□□□ 1.58
KDM2A-202ENST00000398645 TNNT3P45378 269 aaPredicted RBP24.88■■□□□ 1.57
KDM2A-202ENST00000398645 FBXO3Q9UK99 471 aa24.86■■□□□ 1.57
KDM2A-202ENST00000398645 MFAP1P55081 439 aaKnown RBP24.86■■□□□ 1.57
KDM2A-202ENST00000398645 MCCP23508 829 aa24.83■■□□□ 1.57
KDM2A-202ENST00000398645 ITPRIPQ8IWB1 547 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms